RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 SLC22A14Q9Y267 594 aa13.9□□□□□ -0.18
SQSTM1-205ENST00000464493 SEC16AO15027 2179 aa13.89□□□□□ -0.19
SQSTM1-205ENST00000464493 LOC105369274A0A096LPK9 316 aa13.89□□□□□ -0.19
SQSTM1-205ENST00000464493 LOC102723532A0A0G2JNH3 316 aa13.89□□□□□ -0.19
SQSTM1-205ENST00000464493 LOC101059948A0A1B0GTJ6 334 aa13.89□□□□□ -0.19
SQSTM1-205ENST00000464493 SYCE1LA8MT33 242 aa13.89□□□□□ -0.19
SQSTM1-205ENST00000464493 H0YGG7 62 aa13.89□□□□□ -0.19
SQSTM1-205ENST00000464493 MEN1O00255 615 aa13.89□□□□□ -0.19
SQSTM1-205ENST00000464493 HAT1O14929 419 aa13.89□□□□□ -0.19
SQSTM1-205ENST00000464493 TAPBPO15533 448 aa13.89□□□□□ -0.19
SQSTM1-205ENST00000464493 RFPL1O75677 317 aa13.89□□□□□ -0.19
SQSTM1-205ENST00000464493 WDR47O94967 919 aa13.89□□□□□ -0.19
SQSTM1-205ENST00000464493 CDH1P12830 882 aa13.89□□□□□ -0.19
SQSTM1-205ENST00000464493 GGT5P36269 586 aa13.89□□□□□ -0.19
SQSTM1-205ENST00000464493 STAT5AP42229 794 aa13.89□□□□□ -0.19
SQSTM1-205ENST00000464493 GDF5P43026 501 aa13.89□□□□□ -0.19
SQSTM1-205ENST00000464493 SLC6A12P48065 614 aa13.89□□□□□ -0.19
SQSTM1-205ENST00000464493 UCNP55089 124 aa13.89□□□□□ -0.19
SQSTM1-205ENST00000464493 ARF3P61204 181 aaPredicted RBP13.89□□□□□ -0.19
SQSTM1-205ENST00000464493 CSNK1G2P78368 415 aa13.89□□□□□ -0.19
SQSTM1-205ENST00000464493 GPS2Q13227 327 aa13.89□□□□□ -0.19
SQSTM1-205ENST00000464493 SRSF6Q13247 344 aaKnown RBP13.89□□□□□ -0.19
SQSTM1-205ENST00000464493 NAA30Q147X3 362 aaPredicted RBP13.89□□□□□ -0.19
SQSTM1-205ENST00000464493 GRM7Q14831 915 aa13.89□□□□□ -0.19
SQSTM1-205ENST00000464493 C18orf21Q32NC0 220 aaPredicted RBP13.89□□□□□ -0.19
SQSTM1-205ENST00000464493 WASHC2DQ5SRD0 308 aa13.89□□□□□ -0.19
SQSTM1-205ENST00000464493 KLHDC8AQ8IYD2 350 aa13.89□□□□□ -0.19
SQSTM1-205ENST00000464493 DSELQ8IZU8 1212 aa13.89□□□□□ -0.19
SQSTM1-205ENST00000464493 OR4N4Q8N0Y3 316 aa13.89□□□□□ -0.19
SQSTM1-205ENST00000464493 ABHD11Q8NFV4 315 aa13.89□□□□□ -0.19
SQSTM1-205ENST00000464493 CAVIN3Q969G5 261 aa13.89□□□□□ -0.19
SQSTM1-205ENST00000464493 OR2A5Q96R48 311 aa13.89□□□□□ -0.19
SQSTM1-205ENST00000464493 NDC1Q9BTX1 674 aa13.89□□□□□ -0.19
SQSTM1-205ENST00000464493 AKIRIN1Q9H9L7 192 aaPredicted RBP13.89□□□□□ -0.19
SQSTM1-205ENST00000464493 ENAMQ9NRM1 1142 aa13.89□□□□□ -0.19
SQSTM1-205ENST00000464493 STARD5Q9NSY2 213 aa13.89□□□□□ -0.19
SQSTM1-205ENST00000464493 WWOXQ9NZC7 414 aa13.89□□□□□ -0.19
SQSTM1-205ENST00000464493 NUDT4Q9NZJ9 180 aa13.89□□□□□ -0.19
SQSTM1-205ENST00000464493 TBK1Q9UHD2 729 aa13.89□□□□□ -0.19
SQSTM1-205ENST00000464493 PTBP2Q9UKA9 531 aaKnown RBP13.89□□□□□ -0.19
SQSTM1-205ENST00000464493 DYRK1BQ9Y463 629 aa13.89□□□□□ -0.19
SQSTM1-205ENST00000464493 KCNE2Q9Y6J6 123 aa13.89□□□□□ -0.19
SQSTM1-205ENST00000464493 MDC1Q14676 2089 aaKnown RBP13.89□□□□□ -0.19
SQSTM1-205ENST00000464493 SUPT3HB4E1H0 165 aa13.88□□□□□ -0.19
SQSTM1-205ENST00000464493 UBXN8O00124 270 aa13.88□□□□□ -0.19
SQSTM1-205ENST00000464493 MAP2K7O14733 419 aa13.88□□□□□ -0.19
SQSTM1-205ENST00000464493 EFSO43281 561 aa13.88□□□□□ -0.19
SQSTM1-205ENST00000464493 SUPT3HO75486 399 aa13.88□□□□□ -0.19
SQSTM1-205ENST00000464493 STK16O75716 305 aa13.88□□□□□ -0.19
SQSTM1-205ENST00000464493 IPO13O94829 963 aaKnown RBP13.88□□□□□ -0.19
SQSTM1-205ENST00000464493 EIF2S1P05198 315 aaKnown RBP13.88□□□□□ -0.19
SQSTM1-205ENST00000464493 RBP1P09455 135 aa13.88□□□□□ -0.19
SQSTM1-205ENST00000464493 LIFP15018 202 aa13.88□□□□□ -0.19
SQSTM1-205ENST00000464493 TCN2P20062 427 aa13.88□□□□□ -0.19
SQSTM1-205ENST00000464493 RORAP35398 523 aa13.88□□□□□ -0.19
SQSTM1-205ENST00000464493 GRK3P35626 688 aa13.88□□□□□ -0.19
SQSTM1-205ENST00000464493 CCR8P51685 355 aa13.88□□□□□ -0.19
SQSTM1-205ENST00000464493 ARSFP54793 590 aa13.88□□□□□ -0.19
SQSTM1-205ENST00000464493 TMPRSS3P57727 454 aa13.88□□□□□ -0.19
SQSTM1-205ENST00000464493 TSNAXIP1Q2TAA8 658 aa13.88□□□□□ -0.19
SQSTM1-205ENST00000464493 FAM214AQ32MH5 1076 aa13.88□□□□□ -0.19
SQSTM1-205ENST00000464493 RHBDD2Q6NTF9 364 aa13.88□□□□□ -0.19
SQSTM1-205ENST00000464493 C19orf48Q6RUI8 117 aa13.88□□□□□ -0.19
SQSTM1-205ENST00000464493 CCDC81Q6ZN84 652 aa13.88□□□□□ -0.19
SQSTM1-205ENST00000464493 TDRPQ86YL5 185 aa13.88□□□□□ -0.19
SQSTM1-205ENST00000464493 PLD3Q8IV08 490 aa13.88□□□□□ -0.19
SQSTM1-205ENST00000464493 TTC29Q8NA56 475 aaPredicted RBP13.88□□□□□ -0.19
SQSTM1-205ENST00000464493 OR4K1Q8NGD4 311 aa13.88□□□□□ -0.19
SQSTM1-205ENST00000464493 SLC5A11Q8WWX8 675 aa13.88□□□□□ -0.19
SQSTM1-205ENST00000464493 MR1Q95460 341 aa13.88□□□□□ -0.19
SQSTM1-205ENST00000464493 NEIL2Q969S2 332 aa13.88□□□□□ -0.19
SQSTM1-205ENST00000464493 RERGQ96A58 199 aaPredicted RBP13.88□□□□□ -0.19
SQSTM1-205ENST00000464493 ESAMQ96AP7 390 aa13.88□□□□□ -0.19
SQSTM1-205ENST00000464493 KIAA1143Q96AT1 154 aaPredicted RBP13.88□□□□□ -0.19
SQSTM1-205ENST00000464493 TSNARE1Q96NA8 513 aa13.88□□□□□ -0.19
SQSTM1-205ENST00000464493 TMEM79Q9BSE2 394 aa13.88□□□□□ -0.19
SQSTM1-205ENST00000464493 EFHD1Q9BUP0 239 aa13.88□□□□□ -0.19
SQSTM1-205ENST00000464493 GPN2Q9H9Y4 310 aaPredicted RBP13.88□□□□□ -0.19
SQSTM1-205ENST00000464493 TXLNGQ9NUQ3 528 aa13.88□□□□□ -0.19
SQSTM1-205ENST00000464493 PCMTD2Q9NV79 361 aa13.88□□□□□ -0.19
SQSTM1-205ENST00000464493 ZNF358Q9NW07 568 aa13.88□□□□□ -0.19
SQSTM1-205ENST00000464493 SRPK3Q9UPE1 567 aa13.88□□□□□ -0.19
SQSTM1-205ENST00000464493 KMT2BQ9UMN6 2715 aaPredicted RBP13.87□□□□□ -0.19
SQSTM1-205ENST00000464493 KCNE1BA0A087WTH5 132 aa13.87□□□□□ -0.19
SQSTM1-205ENST00000464493 FEZF1A0PJY2 475 aa13.87□□□□□ -0.19
SQSTM1-205ENST00000464493 FITM1A5D6W6 292 aa13.87□□□□□ -0.19
SQSTM1-205ENST00000464493 NUDT17P0C025 328 aa13.87□□□□□ -0.19
SQSTM1-205ENST00000464493 MTHFD2P13995 350 aa13.87□□□□□ -0.19
SQSTM1-205ENST00000464493 ALAS2P22557 587 aa13.87□□□□□ -0.19
SQSTM1-205ENST00000464493 DLSTP36957 453 aa13.87□□□□□ -0.19
SQSTM1-205ENST00000464493 SLCO1A2P46721 670 aa13.87□□□□□ -0.19
SQSTM1-205ENST00000464493 HSPA7P48741 367 aa13.87□□□□□ -0.19
SQSTM1-205ENST00000464493 RPS15AP62244 130 aaKnown RBP13.87□□□□□ -0.19
SQSTM1-205ENST00000464493 FBXO48Q5FWF7 155 aa13.87□□□□□ -0.19
SQSTM1-205ENST00000464493 TECRLQ5HYJ1 363 aa13.87□□□□□ -0.19
SQSTM1-205ENST00000464493 CATSPEREQ5SY80 951 aa13.87□□□□□ -0.19
SQSTM1-205ENST00000464493 YOD1Q5VVQ6 348 aaPredicted RBP13.87□□□□□ -0.19
SQSTM1-205ENST00000464493 FAM199XQ6PEV8 388 aaPredicted RBP13.87□□□□□ -0.19
SQSTM1-205ENST00000464493 NXPE4Q6UWF7 544 aa13.87□□□□□ -0.19
SQSTM1-205ENST00000464493 ZNF517Q6ZMY9 492 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms