RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 SLC26A3P40879 764 aa19.56■□□□□ 0.72
PDLIM4-205ENST00000463615 FAM53BQ14153 422 aa19.56■□□□□ 0.72
PDLIM4-205ENST00000463615 SPANXN3Q5MJ09 141 aa19.56■□□□□ 0.72
PDLIM4-205ENST00000463615 PIWIL4Q7Z3Z4 852 aaKnown RBP19.56■□□□□ 0.72
PDLIM4-205ENST00000463615 CPNE9Q8IYJ1 553 aa19.56■□□□□ 0.72
PDLIM4-205ENST00000463615 PPFIBP2Q8ND30 876 aa19.56■□□□□ 0.72
PDLIM4-205ENST00000463615 PPP4R1Q8TF05 950 aa19.56■□□□□ 0.72
PDLIM4-205ENST00000463615 SNRNP40Q96DI7 357 aaKnown RBP19.56■□□□□ 0.72
PDLIM4-205ENST00000463615 CABS1Q96KC9 395 aa19.56■□□□□ 0.72
PDLIM4-205ENST00000463615 CRB3Q9BUF7 120 aa19.56■□□□□ 0.72
PDLIM4-205ENST00000463615 KCNF1Q9H3M0 494 aa19.56■□□□□ 0.72
PDLIM4-205ENST00000463615 GRPEL1Q9HAV7 217 aa19.56■□□□□ 0.72
PDLIM4-205ENST00000463615 ZBTB20Q9HC78 741 aaPredicted RBP19.56■□□□□ 0.72
PDLIM4-205ENST00000463615 IARS2Q9NSE4 1012 aaKnown RBP19.56■□□□□ 0.72
PDLIM4-205ENST00000463615 C14orf105Q9NVL8 296 aa19.56■□□□□ 0.72
PDLIM4-205ENST00000463615 LUZP4Q9P127 313 aa19.56■□□□□ 0.72
PDLIM4-205ENST00000463615 SPTBN1Q01082 2364 aaKnown RBP19.56■□□□□ 0.72
PDLIM4-205ENST00000463615 KCNE1BA0A087WTH5 132 aa19.55■□□□□ 0.72
PDLIM4-205ENST00000463615 TCP11X1B4DZS4 312 aa19.55■□□□□ 0.72
PDLIM4-205ENST00000463615 HPP00738 406 aa19.55■□□□□ 0.72
PDLIM4-205ENST00000463615 FBLP22087 321 aaKnown RBP19.55■□□□□ 0.72
PDLIM4-205ENST00000463615 GABRB3P28472 473 aa19.55■□□□□ 0.72
PDLIM4-205ENST00000463615 DHX9Q08211 1270 aaKnown RBP19.55■□□□□ 0.72
PDLIM4-205ENST00000463615 SP140Q13342 867 aa19.55■□□□□ 0.72
PDLIM4-205ENST00000463615 FHL5Q5TD97 284 aa19.55■□□□□ 0.72
PDLIM4-205ENST00000463615 AGAP7PQ5VUJ5 663 aa19.55■□□□□ 0.72
PDLIM4-205ENST00000463615 SHISA6Q6ZSJ9 500 aa19.55■□□□□ 0.72
PDLIM4-205ENST00000463615 UBE2R2Q712K3 238 aaPredicted RBP19.55■□□□□ 0.72
PDLIM4-205ENST00000463615 AMER3Q8N944 861 aa19.55■□□□□ 0.72
PDLIM4-205ENST00000463615 RERGQ96A58 199 aaPredicted RBP19.55■□□□□ 0.72
PDLIM4-205ENST00000463615 CCDC138Q96M89 665 aa19.55■□□□□ 0.72
PDLIM4-205ENST00000463615 AGAP4Q96P64 663 aa19.55■□□□□ 0.72
PDLIM4-205ENST00000463615 WDR77Q9BQA1 342 aaPredicted RBP19.55■□□□□ 0.72
PDLIM4-205ENST00000463615 LHPPQ9H008 270 aa19.55■□□□□ 0.72
PDLIM4-205ENST00000463615 PCBD2Q9H0N5 130 aa19.55■□□□□ 0.72
PDLIM4-205ENST00000463615 DDX47Q9H0S4 455 aaKnown RBP19.55■□□□□ 0.72
PDLIM4-205ENST00000463615 TMEM184CQ9NVA4 438 aa19.55■□□□□ 0.72
PDLIM4-205ENST00000463615 CUEDC1Q9NWM3 386 aaPredicted RBP19.55■□□□□ 0.72
PDLIM4-205ENST00000463615 ASIC3Q9UHC3 531 aa19.55■□□□□ 0.72
PDLIM4-205ENST00000463615 TRMT6Q9UJA5 497 aaKnown RBP19.55■□□□□ 0.72
PDLIM4-205ENST00000463615 PCDHGA10Q9Y5H3 936 aa19.55■□□□□ 0.72
PDLIM4-205ENST00000463615 MDC1Q14676 2089 aaKnown RBP19.55■□□□□ 0.72
PDLIM4-205ENST00000463615 SLC16A5O15375 505 aa19.54■□□□□ 0.72
PDLIM4-205ENST00000463615 C8GP07360 202 aa19.54■□□□□ 0.72
PDLIM4-205ENST00000463615 RGS4P49798 205 aa19.54■□□□□ 0.72
PDLIM4-205ENST00000463615 HKDC1Q2TB90 917 aa19.54■□□□□ 0.72
PDLIM4-205ENST00000463615 MSS51Q4VC12 460 aa19.54■□□□□ 0.72
PDLIM4-205ENST00000463615 SYDE1Q6ZW31 735 aaPredicted RBP19.54■□□□□ 0.72
PDLIM4-205ENST00000463615 MCOLN3Q8TDD5 553 aa19.54■□□□□ 0.72
PDLIM4-205ENST00000463615 PLAC1Q9HBJ0 212 aa19.54■□□□□ 0.72
PDLIM4-205ENST00000463615 MKKSQ9NPJ1 570 aaPredicted RBP19.54■□□□□ 0.72
PDLIM4-205ENST00000463615 TAS2R13Q9NYV9 303 aa19.54■□□□□ 0.72
PDLIM4-205ENST00000463615 STOX2Q9P2F5 926 aaPredicted RBP19.54■□□□□ 0.72
PDLIM4-205ENST00000463615 C3orf18Q9UK00 162 aa19.54■□□□□ 0.72
PDLIM4-205ENST00000463615 HIVEP3Q5T1R4 2406 aa19.53■□□□□ 0.72
PDLIM4-205ENST00000463615 HAT1O14929 419 aa19.53■□□□□ 0.72
PDLIM4-205ENST00000463615 FOXS1O43638 330 aa19.53■□□□□ 0.72
PDLIM4-205ENST00000463615 SYF2O95926 243 aaKnown RBP19.53■□□□□ 0.72
PDLIM4-205ENST00000463615 ACPPP15309 386 aa19.53■□□□□ 0.72
PDLIM4-205ENST00000463615 Q0VFX4 171 aa19.53■□□□□ 0.72
PDLIM4-205ENST00000463615 TSTA3Q13630 321 aaPredicted RBP19.53■□□□□ 0.72
PDLIM4-205ENST00000463615 FRG1Q14331 258 aaKnown RBP19.53■□□□□ 0.72
PDLIM4-205ENST00000463615 MORF4L2Q15014 288 aa19.53■□□□□ 0.72
PDLIM4-205ENST00000463615 VWA2Q5GFL6 755 aa19.53■□□□□ 0.72
PDLIM4-205ENST00000463615 IRAK1BP1Q5VVH5 260 aa19.53■□□□□ 0.72
PDLIM4-205ENST00000463615 CUZD1Q86UP6 607 aa19.53■□□□□ 0.72
PDLIM4-205ENST00000463615 LAPTM4BQ86VI4 370 aa19.53■□□□□ 0.72
PDLIM4-205ENST00000463615 SPNS2Q8IVW8 549 aa19.53■□□□□ 0.72
PDLIM4-205ENST00000463615 EEF1AKMT1Q8WVE0 214 aa19.53■□□□□ 0.72
PDLIM4-205ENST00000463615 THAP11Q96EK4 314 aa19.53■□□□□ 0.72
PDLIM4-205ENST00000463615 C19orf60Q96EN9 201 aa19.53■□□□□ 0.72
PDLIM4-205ENST00000463615 DRC3Q9H069 523 aa19.53■□□□□ 0.72
PDLIM4-205ENST00000463615 ILKAPQ9H0C8 392 aaPredicted RBP19.53■□□□□ 0.72
PDLIM4-205ENST00000463615 PARVBQ9HBI1 364 aa19.53■□□□□ 0.72
PDLIM4-205ENST00000463615 CCDC177Q9NQR7 707 aaPredicted RBP19.53■□□□□ 0.72
PDLIM4-205ENST00000463615 PDE10AQ9Y233 779 aa19.53■□□□□ 0.72
PDLIM4-205ENST00000463615 CNTRLQ7Z7A1 2325 aa19.53■□□□□ 0.72
PDLIM4-205ENST00000463615 MAP2K7O14733 419 aa19.52■□□□□ 0.72
PDLIM4-205ENST00000463615 ALOX12BO75342 701 aa19.52■□□□□ 0.72
PDLIM4-205ENST00000463615 CBX6O95503 412 aa19.52■□□□□ 0.72
PDLIM4-205ENST00000463615 AHSGP02765 367 aa19.52■□□□□ 0.72
PDLIM4-205ENST00000463615 CYC1P08574 325 aa19.52■□□□□ 0.72
PDLIM4-205ENST00000463615 FDXRP22570 491 aa19.52■□□□□ 0.72
PDLIM4-205ENST00000463615 TBPL1P62380 186 aa19.52■□□□□ 0.72
PDLIM4-205ENST00000463615 NDUFAF7Q7L592 441 aa19.52■□□□□ 0.72
PDLIM4-205ENST00000463615 IGDCC3Q8IVU1 814 aa19.52■□□□□ 0.72
PDLIM4-205ENST00000463615 CISD2Q8N5K1 135 aaKnown RBP19.52■□□□□ 0.72
PDLIM4-205ENST00000463615 LRRC39Q96DD0 335 aa19.52■□□□□ 0.72
PDLIM4-205ENST00000463615 CERS2Q96G23 380 aa19.52■□□□□ 0.72
PDLIM4-205ENST00000463615 RUNDC3BQ96NL0 473 aa19.52■□□□□ 0.72
PDLIM4-205ENST00000463615 LMF1Q96S06 567 aa19.52■□□□□ 0.72
PDLIM4-205ENST00000463615 NDNQ99608 321 aa19.52■□□□□ 0.72
PDLIM4-205ENST00000463615 FAM129AQ9BZQ8 928 aa19.52■□□□□ 0.72
PDLIM4-205ENST00000463615 ASF1BQ9NVP2 202 aa19.52■□□□□ 0.72
PDLIM4-205ENST00000463615 TRMT1Q9NXH9 659 aaKnown RBP19.52■□□□□ 0.72
PDLIM4-205ENST00000463615 TRPC4Q9UBN4 977 aa19.52■□□□□ 0.72
PDLIM4-205ENST00000463615 ADAMTS6Q9UKP5 1117 aa19.52■□□□□ 0.72
PDLIM4-205ENST00000463615 CORO1CQ9ULV4 474 aaPredicted RBP19.52■□□□□ 0.72
PDLIM4-205ENST00000463615 LOC102723996A0A087X1L8 192 aa19.51■□□□□ 0.71
PDLIM4-205ENST00000463615 BLACEA4D250 179 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms