RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 RPS6KA6Q9UK32 745 aa16.39■□□□□ 0.22
ACTB-207ENST00000462494 PRRC2BQ5JSZ5 2229 aaKnown RBP16.39■□□□□ 0.21
ACTB-207ENST00000462494 ARHGEF33A8MVX0 844 aa16.39■□□□□ 0.21
ACTB-207ENST00000462494 YY2O15391 372 aa16.39■□□□□ 0.21
ACTB-207ENST00000462494 SGTAO43765 313 aa16.39■□□□□ 0.21
ACTB-207ENST00000462494 BCAS1O75363 584 aaPredicted RBP16.39■□□□□ 0.21
ACTB-207ENST00000462494 CLPXO76031 633 aa16.39■□□□□ 0.21
ACTB-207ENST00000462494 PCMT1P22061 227 aa16.39■□□□□ 0.21
ACTB-207ENST00000462494 GP2P55259 537 aaKnown RBP16.39■□□□□ 0.21
ACTB-207ENST00000462494 EMX1Q04741 257 aaPredicted RBP16.39■□□□□ 0.21
ACTB-207ENST00000462494 CSTF3Q12996 717 aaKnown RBP16.39■□□□□ 0.21
ACTB-207ENST00000462494 AQP6Q13520 282 aa16.39■□□□□ 0.21
ACTB-207ENST00000462494 CCSMST1Q4G0I0 132 aa16.39■□□□□ 0.21
ACTB-207ENST00000462494 ADNP2Q6IQ32 1131 aa16.39■□□□□ 0.21
ACTB-207ENST00000462494 SLC39A5Q6ZMH5 540 aa16.39■□□□□ 0.21
ACTB-207ENST00000462494 LILRA3Q8N6C8 439 aaPredicted RBP16.39■□□□□ 0.21
ACTB-207ENST00000462494 WDR20Q8TBZ3 569 aa16.39■□□□□ 0.21
ACTB-207ENST00000462494 FKBP10Q96AY3 582 aa16.39■□□□□ 0.21
ACTB-207ENST00000462494 VWCEQ96DN2 955 aa16.39■□□□□ 0.21
ACTB-207ENST00000462494 HSH2DQ96JZ2 352 aa16.39■□□□□ 0.21
ACTB-207ENST00000462494 SGK2Q9HBY8 427 aa16.39■□□□□ 0.21
ACTB-207ENST00000462494 ASAH2Q9NR71 780 aa16.39■□□□□ 0.21
ACTB-207ENST00000462494 IRAK4Q9NWZ3 460 aa16.39■□□□□ 0.21
ACTB-207ENST00000462494 ERVK-18Q9QC07 812 aa16.39■□□□□ 0.21
ACTB-207ENST00000462494 VPS4AQ9UN37 437 aa16.39■□□□□ 0.21
ACTB-207ENST00000462494 SAMHD1Q9Y3Z3 626 aaKnown RBP16.39■□□□□ 0.21
ACTB-207ENST00000462494 DOCK6Q96HP0 2047 aa16.39■□□□□ 0.21
ACTB-207ENST00000462494 ZNF99A8MXY4 864 aaPredicted RBP16.38■□□□□ 0.21
ACTB-207ENST00000462494 SCN2BO60939 215 aa16.38■□□□□ 0.21
ACTB-207ENST00000462494 NDUFS2O75306 463 aa16.38■□□□□ 0.21
ACTB-207ENST00000462494 LEFTY1O75610 366 aa16.38■□□□□ 0.21
ACTB-207ENST00000462494 MYO1DO94832 1006 aa16.38■□□□□ 0.21
ACTB-207ENST00000462494 CCDC159P0C7I6 412 aa16.38■□□□□ 0.21
ACTB-207ENST00000462494 CYP2A6P11509 494 aaPredicted RBP16.38■□□□□ 0.21
ACTB-207ENST00000462494 ACPPP15309 386 aa16.38■□□□□ 0.21
ACTB-207ENST00000462494 DNAJA1P31689 397 aaKnown RBP16.38■□□□□ 0.21
ACTB-207ENST00000462494 CCR2P41597 374 aa16.38■□□□□ 0.21
ACTB-207ENST00000462494 CLK3P49761 638 aaKnown RBP16.38■□□□□ 0.21
ACTB-207ENST00000462494 MLLT10P55197 1068 aa16.38■□□□□ 0.21
ACTB-207ENST00000462494 ARSIQ5FYB1 569 aa16.38■□□□□ 0.21
ACTB-207ENST00000462494 PDE12Q6L8Q7 609 aaKnown RBP16.38■□□□□ 0.21
ACTB-207ENST00000462494 ANKRD33Q7Z3H0 272 aa16.38■□□□□ 0.21
ACTB-207ENST00000462494 B3GNT8Q7Z7M8 397 aa16.38■□□□□ 0.21
ACTB-207ENST00000462494 PTOV1Q86YD1 416 aa16.38■□□□□ 0.21
ACTB-207ENST00000462494 RAVER1Q8IY67 606 aaKnown RBP16.38■□□□□ 0.21
ACTB-207ENST00000462494 SETD9Q8NE22 299 aa16.38■□□□□ 0.21
ACTB-207ENST00000462494 CYB5D2Q8WUJ1 264 aa16.38■□□□□ 0.21
ACTB-207ENST00000462494 ZNF296Q8WUU4 475 aaPredicted RBP16.38■□□□□ 0.21
ACTB-207ENST00000462494 SORCS1Q8WY21 1168 aa16.38■□□□□ 0.21
ACTB-207ENST00000462494 CLP1Q92989 425 aaKnown RBP16.38■□□□□ 0.21
ACTB-207ENST00000462494 MAGEB10Q96LZ2 347 aaPredicted RBP16.38■□□□□ 0.21
ACTB-207ENST00000462494 ASPSCR1Q9BZE9 553 aa16.38■□□□□ 0.21
ACTB-207ENST00000462494 FAIMQ9NVQ4 179 aa16.38■□□□□ 0.21
ACTB-207ENST00000462494 DNAAF2Q9NVR5 837 aaKnown RBP16.38■□□□□ 0.21
ACTB-207ENST00000462494 RUVBL1Q9Y265 456 aaKnown RBP16.38■□□□□ 0.21
ACTB-207ENST00000462494 BTBD3Q9Y2F9 522 aa16.38■□□□□ 0.21
ACTB-207ENST00000462494 TRIM17Q9Y577 477 aa16.38■□□□□ 0.21
ACTB-207ENST00000462494 GMPPBQ9Y5P6 360 aa16.38■□□□□ 0.21
ACTB-207ENST00000462494 FADS2P1A8MWK0 482 aa16.38■□□□□ 0.21
ACTB-207ENST00000462494 NPIPB8E9PQR5 432 aa16.38■□□□□ 0.21
ACTB-207ENST00000462494 TSPAN6O43657 245 aa16.38■□□□□ 0.21
ACTB-207ENST00000462494 LILRB3O75022 631 aa16.38■□□□□ 0.21
ACTB-207ENST00000462494 GSTM1P09488 218 aa16.38■□□□□ 0.21
ACTB-207ENST00000462494 GPX2P18283 190 aa16.38■□□□□ 0.21
ACTB-207ENST00000462494 ITIH1P19827 911 aa16.38■□□□□ 0.21
ACTB-207ENST00000462494 VIPR1P32241 457 aa16.38■□□□□ 0.21
ACTB-207ENST00000462494 BDKRB1P46663 353 aa16.38■□□□□ 0.21
ACTB-207ENST00000462494 GSTM4Q03013 218 aa16.38■□□□□ 0.21
ACTB-207ENST00000462494 HKDC1Q2TB90 917 aa16.38■□□□□ 0.21
ACTB-207ENST00000462494 AGTRAPQ6RW13 159 aa16.38■□□□□ 0.21
ACTB-207ENST00000462494 CCDC81Q6ZN84 652 aa16.38■□□□□ 0.21
ACTB-207ENST00000462494 SLC16A12Q6ZSM3 486 aa16.38■□□□□ 0.21
ACTB-207ENST00000462494 ATG16L2Q8NAA4 619 aa16.38■□□□□ 0.21
ACTB-207ENST00000462494 GPR156Q8NFN8 814 aa16.38■□□□□ 0.21
ACTB-207ENST00000462494 TMEM159Q96B96 161 aa16.38■□□□□ 0.21
ACTB-207ENST00000462494 FCRL1Q96LA6 429 aa16.38■□□□□ 0.21
ACTB-207ENST00000462494 DUSP26Q9BV47 211 aa16.38■□□□□ 0.21
ACTB-207ENST00000462494 TPT1P8Q9HAU6 139 aa16.38■□□□□ 0.21
ACTB-207ENST00000462494 FAM120CQ9NX05 1096 aaKnown RBP16.38■□□□□ 0.21
ACTB-207ENST00000462494 MAFFQ9ULX9 164 aa16.38■□□□□ 0.21
ACTB-207ENST00000462494 CORINQ9Y5Q5 1042 aa16.38■□□□□ 0.21
ACTB-207ENST00000462494 DENND4CQ5VZ89 1909 aa16.38■□□□□ 0.21
ACTB-207ENST00000462494 SERTM1A2A2V5 107 aa16.37■□□□□ 0.21
ACTB-207ENST00000462494 AXIN1O15169 862 aa16.37■□□□□ 0.21
ACTB-207ENST00000462494 SLCO2B1O94956 709 aa16.37■□□□□ 0.21
ACTB-207ENST00000462494 ETHE1O95571 254 aa16.37■□□□□ 0.21
ACTB-207ENST00000462494 NTRK1P04629 796 aa16.37■□□□□ 0.21
ACTB-207ENST00000462494 NUDT7P0C024 238 aa16.37■□□□□ 0.21
ACTB-207ENST00000462494 ZNF30P17039 623 aa16.37■□□□□ 0.21
ACTB-207ENST00000462494 AQP1P29972 269 aa16.37■□□□□ 0.21
ACTB-207ENST00000462494 PBLDP30039 288 aaPredicted RBP16.37■□□□□ 0.21
ACTB-207ENST00000462494 MAP2K4P45985 399 aa16.37■□□□□ 0.21
ACTB-207ENST00000462494 NR1D2Q14995 579 aa16.37■□□□□ 0.21
ACTB-207ENST00000462494 NPTX1Q15818 432 aa16.37■□□□□ 0.21
ACTB-207ENST00000462494 KDM4DQ6B0I6 523 aa16.37■□□□□ 0.21
ACTB-207ENST00000462494 ERICH5Q6P6B1 374 aa16.37■□□□□ 0.21
ACTB-207ENST00000462494 BRAT1Q6PJG6 821 aa16.37■□□□□ 0.21
ACTB-207ENST00000462494 NEK10Q6ZWH5 1172 aa16.37■□□□□ 0.21
ACTB-207ENST00000462494 C1orf52Q8N6N3 182 aaKnown RBP16.37■□□□□ 0.21
ACTB-207ENST00000462494 TTC29Q8NA56 475 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms