RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-208ENST00000461578 GSDMBQ8TAX9 411 aa13.01□□□□□ -0.33
PABPC4-208ENST00000461578 PHF10Q8WUB8 498 aaKnown RBP13.01□□□□□ -0.33
PABPC4-208ENST00000461578 METTL21AQ8WXB1 218 aa13.01□□□□□ -0.33
PABPC4-208ENST00000461578 MVB12AQ96EY5 273 aa13.01□□□□□ -0.33
PABPC4-208ENST00000461578 ZNF354BQ96LW1 612 aa13.01□□□□□ -0.33
PABPC4-208ENST00000461578 DMRTA2Q96SC8 542 aa13.01□□□□□ -0.33
PABPC4-208ENST00000461578 UTP23Q9BRU9 249 aaKnown RBP13.01□□□□□ -0.33
PABPC4-208ENST00000461578 TMUB1Q9BVT8 246 aa13.01□□□□□ -0.33
PABPC4-208ENST00000461578 CARD6Q9BX69 1037 aa13.01□□□□□ -0.33
PABPC4-208ENST00000461578 TGIF2Q9GZN2 237 aa13.01□□□□□ -0.33
PABPC4-208ENST00000461578 KCNK13Q9HB14 408 aa13.01□□□□□ -0.33
PABPC4-208ENST00000461578 ABHD10Q9NUJ1 306 aa13.01□□□□□ -0.33
PABPC4-208ENST00000461578 COQ3Q9NZJ6 369 aa13.01□□□□□ -0.33
PABPC4-208ENST00000461578 R3HDM2Q9Y2K5 976 aaKnown RBP13.01□□□□□ -0.33
PABPC4-208ENST00000461578 KLK4Q9Y5K2 254 aa13.01□□□□□ -0.33
PABPC4-208ENST00000461578 ASPDHA6ND91 283 aa13□□□□□ -0.33
PABPC4-208ENST00000461578 E9PLN8 166 aa13□□□□□ -0.33
PABPC4-208ENST00000461578 GOLGA6L19H0YKK7 550 aa13□□□□□ -0.33
PABPC4-208ENST00000461578 PRRG2O14669 202 aa13□□□□□ -0.33
PABPC4-208ENST00000461578 ADAM10O14672 748 aa13□□□□□ -0.33
PABPC4-208ENST00000461578 FOXS1O43638 330 aa13□□□□□ -0.33
PABPC4-208ENST00000461578 VPS26AO75436 327 aa13□□□□□ -0.33
PABPC4-208ENST00000461578 SLCO2B1O94956 709 aa13□□□□□ -0.33
PABPC4-208ENST00000461578 CD46P15529 392 aa13□□□□□ -0.33
PABPC4-208ENST00000461578 OC90Q02509 493 aaPredicted RBP13□□□□□ -0.33
PABPC4-208ENST00000461578 PARP6Q2NL67 630 aa13□□□□□ -0.33
PABPC4-208ENST00000461578 MINDY4Q4G0A6 757 aa13□□□□□ -0.33
PABPC4-208ENST00000461578 AADACL2Q6P093 401 aa13□□□□□ -0.33
PABPC4-208ENST00000461578 SUSD1Q6UWL2 747 aa13□□□□□ -0.33
PABPC4-208ENST00000461578 CPEB2Q7Z5Q1 589 aaKnown RBP13□□□□□ -0.33
PABPC4-208ENST00000461578 CRLF3Q8IUI8 442 aa13□□□□□ -0.33
PABPC4-208ENST00000461578 SIAH3Q8IW03 269 aa13□□□□□ -0.33
PABPC4-208ENST00000461578 FAM71DQ8N9W8 422 aa13□□□□□ -0.33
PABPC4-208ENST00000461578 TMEM178AQ8NBL3 297 aa13□□□□□ -0.33
PABPC4-208ENST00000461578 OR52K1Q8NGK4 314 aa13□□□□□ -0.33
PABPC4-208ENST00000461578 OR6P1Q8NGX9 317 aa13□□□□□ -0.33
PABPC4-208ENST00000461578 SCMH1Q96GD3 660 aa13□□□□□ -0.33
PABPC4-208ENST00000461578 NPAS2Q99743 824 aa13□□□□□ -0.33
PABPC4-208ENST00000461578 TREX2Q9BQ50 279 aaPredicted RBP13□□□□□ -0.33
PABPC4-208ENST00000461578 VKORC1Q9BQB6 163 aa13□□□□□ -0.33
PABPC4-208ENST00000461578 TRIM51Q9BSJ1 452 aa13□□□□□ -0.33
PABPC4-208ENST00000461578 OSBPL8Q9BZF1 889 aa13□□□□□ -0.33
PABPC4-208ENST00000461578 VN1R1Q9GZP7 353 aa13□□□□□ -0.33
PABPC4-208ENST00000461578 DRC3Q9H069 523 aa13□□□□□ -0.33
PABPC4-208ENST00000461578 MRPS30Q9NP92 439 aaKnown RBP13□□□□□ -0.33
PABPC4-208ENST00000461578 INTUQ9ULD6 942 aa13□□□□□ -0.33
PABPC4-208ENST00000461578 TFR2Q9UP52 801 aa13□□□□□ -0.33
PABPC4-208ENST00000461578 SPG11Q96JI7 2443 aa13□□□□□ -0.33
PABPC4-208ENST00000461578 NKX2-6A6NCS4 301 aa12.99□□□□□ -0.33
PABPC4-208ENST00000461578 OR2W5A6NFC9 320 aa12.99□□□□□ -0.33
PABPC4-208ENST00000461578 FAM90A27PA6NNH2 459 aa12.99□□□□□ -0.33
PABPC4-208ENST00000461578 STATHP02808 62 aa12.99□□□□□ -0.33
PABPC4-208ENST00000461578 PSMA3P25788 255 aa12.99□□□□□ -0.33
PABPC4-208ENST00000461578 EMP3P54852 163 aa12.99□□□□□ -0.33
PABPC4-208ENST00000461578 COPS2P61201 443 aa12.99□□□□□ -0.33
PABPC4-208ENST00000461578 SNRPNP63162 240 aaKnown RBP12.99□□□□□ -0.33
PABPC4-208ENST00000461578 MEP1AQ16819 746 aa12.99□□□□□ -0.33
PABPC4-208ENST00000461578 FASTKD1Q53R41 847 aaKnown RBP12.99□□□□□ -0.33
PABPC4-208ENST00000461578 PLAG1Q6DJT9 500 aa12.99□□□□□ -0.33
PABPC4-208ENST00000461578 PTRHD1Q6GMV3 140 aaKnown RBP12.99□□□□□ -0.33
PABPC4-208ENST00000461578 CEP128Q6ZU80 1094 aa12.99□□□□□ -0.33
PABPC4-208ENST00000461578 ZNF534Q76KX8 674 aa12.99□□□□□ -0.33
PABPC4-208ENST00000461578 CHERPQ8IWX8 916 aaKnown RBP12.99□□□□□ -0.33
PABPC4-208ENST00000461578 FAM98AQ8NCA5 519 aaKnown RBP12.99□□□□□ -0.33
PABPC4-208ENST00000461578 OR4L1Q8NH43 312 aa12.99□□□□□ -0.33
PABPC4-208ENST00000461578 HMGCLL1Q8TB92 370 aa12.99□□□□□ -0.33
PABPC4-208ENST00000461578 RERGQ96A58 199 aaPredicted RBP12.99□□□□□ -0.33
PABPC4-208ENST00000461578 ZNF778Q96MU6 729 aa12.99□□□□□ -0.33
PABPC4-208ENST00000461578 PLCD4Q9BRC7 762 aa12.99□□□□□ -0.33
PABPC4-208ENST00000461578 NIPBLQ6KC79 2804 aaeCLIP12.98□□□□□ -0.33
PABPC4-208ENST00000461578 GABRR3A8MPY1 467 aa12.98□□□□□ -0.33
PABPC4-208ENST00000461578 P2RX6O15547 441 aa12.98□□□□□ -0.33
PABPC4-208ENST00000461578 DNAJA1P31689 397 aaKnown RBP12.98□□□□□ -0.33
PABPC4-208ENST00000461578 PTGER1P34995 402 aa12.98□□□□□ -0.33
PABPC4-208ENST00000461578 IST1P53990 364 aa12.98□□□□□ -0.33
PABPC4-208ENST00000461578 HADHBP55084 474 aaKnown RBP12.98□□□□□ -0.33
PABPC4-208ENST00000461578 PRAMEP78395 509 aa12.98□□□□□ -0.33
PABPC4-208ENST00000461578 TRIM14Q14142 442 aa12.98□□□□□ -0.33
PABPC4-208ENST00000461578 NAA25Q14CX7 972 aa12.98□□□□□ -0.33
PABPC4-208ENST00000461578 MAPKAPK3Q16644 382 aa12.98□□□□□ -0.33
PABPC4-208ENST00000461578 RNFT1Q5M7Z0 435 aa12.98□□□□□ -0.33
PABPC4-208ENST00000461578 TSTD2Q5T7W7 516 aa12.98□□□□□ -0.33
PABPC4-208ENST00000461578 H3F3CQ6NXT2 135 aa12.98□□□□□ -0.33
PABPC4-208ENST00000461578 FGD2Q7Z6J4 655 aa12.98□□□□□ -0.33
PABPC4-208ENST00000461578 PAQR7Q86WK9 346 aa12.98□□□□□ -0.33
PABPC4-208ENST00000461578 EID3Q8N140 333 aa12.98□□□□□ -0.33
PABPC4-208ENST00000461578 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.98□□□□□ -0.33
PABPC4-208ENST00000461578 FOPNLQ96NB1 174 aa12.98□□□□□ -0.33
PABPC4-208ENST00000461578 CYTH2Q99418 400 aa12.98□□□□□ -0.33
PABPC4-208ENST00000461578 ZNF559Q9BR84 538 aa12.98□□□□□ -0.33
PABPC4-208ENST00000461578 UCK2Q9BZX2 261 aa12.98□□□□□ -0.33
PABPC4-208ENST00000461578 NPDC1Q9NQX5 325 aaPredicted RBP12.98□□□□□ -0.33
PABPC4-208ENST00000461578 ABCF3Q9NUQ8 709 aa12.98□□□□□ -0.33
PABPC4-208ENST00000461578 SPATA7Q9P0W8 599 aa12.98□□□□□ -0.33
PABPC4-208ENST00000461578 TNFRSF10DQ9UBN6 386 aa12.98□□□□□ -0.33
PABPC4-208ENST00000461578 PCYOX1Q9UHG3 505 aa12.98□□□□□ -0.33
PABPC4-208ENST00000461578 ASB1Q9Y576 335 aa12.98□□□□□ -0.33
PABPC4-208ENST00000461578 PRRC2AP48634 2157 aaKnown RBP12.98□□□□□ -0.33
PABPC4-208ENST00000461578 HCFC1P51610 2035 aa12.98□□□□□ -0.33
PABPC4-208ENST00000461578 INTS1Q8N201 2190 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms