RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 KIAA0754O94854 1291 aa13.41□□□□□ -0.26
HDLBP-229ENST00000460826 DLGAP3O95886 979 aa13.41□□□□□ -0.26
HDLBP-229ENST00000460826 GSTA1P08263 222 aa13.41□□□□□ -0.26
HDLBP-229ENST00000460826 GFAPP14136 432 aa13.41□□□□□ -0.26
HDLBP-229ENST00000460826 EPORP19235 508 aa13.41□□□□□ -0.26
HDLBP-229ENST00000460826 ITGA1P56199 1179 aa13.41□□□□□ -0.26
HDLBP-229ENST00000460826 SLC18A2Q05940 514 aa13.41□□□□□ -0.26
HDLBP-229ENST00000460826 NAA25Q14CX7 972 aa13.41□□□□□ -0.26
HDLBP-229ENST00000460826 SETDB1Q15047 1291 aa13.41□□□□□ -0.26
HDLBP-229ENST00000460826 PFKFB4Q16877 469 aa13.41□□□□□ -0.26
HDLBP-229ENST00000460826 PRAMEF9Q5VWM5 478 aa13.41□□□□□ -0.26
HDLBP-229ENST00000460826 TIPARPQ7Z3E1 657 aaKnown RBP13.41□□□□□ -0.26
HDLBP-229ENST00000460826 OR4N4Q8N0Y3 316 aa13.41□□□□□ -0.26
HDLBP-229ENST00000460826 CNPY4Q8N129 248 aa13.41□□□□□ -0.26
HDLBP-229ENST00000460826 PTGR2Q8N8N7 351 aaPredicted RBP13.41□□□□□ -0.26
HDLBP-229ENST00000460826 SLC5A11Q8WWX8 675 aa13.41□□□□□ -0.26
HDLBP-229ENST00000460826 ZCCHC14Q8WYQ9 949 aaKnown RBP13.41□□□□□ -0.26
HDLBP-229ENST00000460826 FGF11Q92914 225 aa13.41□□□□□ -0.26
HDLBP-229ENST00000460826 ZPBPQ9BS86 351 aa13.41□□□□□ -0.26
HDLBP-229ENST00000460826 CD244Q9BZW8 370 aa13.41□□□□□ -0.26
HDLBP-229ENST00000460826 FANCEQ9HB96 536 aa13.41□□□□□ -0.26
HDLBP-229ENST00000460826 STARD5Q9NSY2 213 aa13.41□□□□□ -0.26
HDLBP-229ENST00000460826 DNAJC11Q9NVH1 559 aa13.41□□□□□ -0.26
HDLBP-229ENST00000460826 ACSL6Q9UKU0 697 aa13.41□□□□□ -0.26
HDLBP-229ENST00000460826 DYRK1BQ9Y463 629 aa13.41□□□□□ -0.26
HDLBP-229ENST00000460826 EPG5Q9HCE0 2579 aa13.41□□□□□ -0.26
HDLBP-229ENST00000460826 FEZF1A0PJY2 475 aa13.4□□□□□ -0.26
HDLBP-229ENST00000460826 E7EQ34 232 aa13.4□□□□□ -0.26
HDLBP-229ENST00000460826 LCMT2O60294 686 aaKnown RBP13.4□□□□□ -0.26
HDLBP-229ENST00000460826 SCRG1O75711 98 aa13.4□□□□□ -0.26
HDLBP-229ENST00000460826 STK17BO94768 372 aa13.4□□□□□ -0.26
HDLBP-229ENST00000460826 SIX3O95343 332 aaPredicted RBP13.4□□□□□ -0.26
HDLBP-229ENST00000460826 NTRK1P04629 796 aa13.4□□□□□ -0.26
HDLBP-229ENST00000460826 CREB1P16220 341 aa13.4□□□□□ -0.26
HDLBP-229ENST00000460826 KRT4P19013 534 aa13.4□□□□□ -0.26
HDLBP-229ENST00000460826 VARSP26640 1264 aaKnown RBP13.4□□□□□ -0.26
HDLBP-229ENST00000460826 ALDH18A1P54886 795 aaKnown RBP13.4□□□□□ -0.26
HDLBP-229ENST00000460826 PCBP4P57723 403 aaKnown RBP13.4□□□□□ -0.26
HDLBP-229ENST00000460826 VSX2P58304 361 aaPredicted RBP13.4□□□□□ -0.26
HDLBP-229ENST00000460826 CDC16Q13042 620 aa13.4□□□□□ -0.26
HDLBP-229ENST00000460826 TGIF1Q15583 401 aa13.4□□□□□ -0.26
HDLBP-229ENST00000460826 ZC3H12BQ5HYM0 836 aaKnown RBP13.4□□□□□ -0.26
HDLBP-229ENST00000460826 CEP85LQ5SZL2 805 aa13.4□□□□□ -0.26
HDLBP-229ENST00000460826 CYB5D1Q6P9G0 228 aa13.4□□□□□ -0.26
HDLBP-229ENST00000460826 LRIG3Q6UXM1 1119 aa13.4□□□□□ -0.26
HDLBP-229ENST00000460826 LRRC70Q7Z2Q7 622 aa13.4□□□□□ -0.26
HDLBP-229ENST00000460826 TMPRSS11BQ86T26 416 aa13.4□□□□□ -0.26
HDLBP-229ENST00000460826 LCA5Q86VQ0 697 aa13.4□□□□□ -0.26
HDLBP-229ENST00000460826 BPHLQ86WA6 291 aaPredicted RBP13.4□□□□□ -0.26
HDLBP-229ENST00000460826 TMEM126BQ8IUX1 230 aa13.4□□□□□ -0.26
HDLBP-229ENST00000460826 SRRM1Q8IYB3 904 aaKnown RBP13.4□□□□□ -0.26
HDLBP-229ENST00000460826 SNX31Q8N9S9 440 aa13.4□□□□□ -0.26
HDLBP-229ENST00000460826 SLC38A9Q8NBW4 561 aa13.4□□□□□ -0.26
HDLBP-229ENST00000460826 ZNF740Q8NDX6 193 aa13.4□□□□□ -0.26
HDLBP-229ENST00000460826 ABHD11Q8NFV4 315 aa13.4□□□□□ -0.26
HDLBP-229ENST00000460826 OR4K1Q8NGD4 311 aa13.4□□□□□ -0.26
HDLBP-229ENST00000460826 OR8K5Q8NH50 307 aa13.4□□□□□ -0.26
HDLBP-229ENST00000460826 SNIP1Q8TAD8 396 aaKnown RBP13.4□□□□□ -0.26
HDLBP-229ENST00000460826 N4BP2L2Q92802 583 aaPredicted RBP13.4□□□□□ -0.26
HDLBP-229ENST00000460826 PHF21BQ96EK2 531 aa13.4□□□□□ -0.26
HDLBP-229ENST00000460826 NAF1Q96HR8 494 aaKnown RBP13.4□□□□□ -0.26
HDLBP-229ENST00000460826 ZNF285Q96NJ3 590 aa13.4□□□□□ -0.26
HDLBP-229ENST00000460826 CNTNAP3BQ96NU0 1288 aa13.4□□□□□ -0.26
HDLBP-229ENST00000460826 OR2A5Q96R48 311 aa13.4□□□□□ -0.26
HDLBP-229ENST00000460826 ZFYVE21Q9BQ24 234 aa13.4□□□□□ -0.26
HDLBP-229ENST00000460826 SELENOSQ9BQE4 189 aa13.4□□□□□ -0.26
HDLBP-229ENST00000460826 CNTNAP3Q9BZ76 1288 aa13.4□□□□□ -0.26
HDLBP-229ENST00000460826 ULBP3Q9BZM4 244 aa13.4□□□□□ -0.26
HDLBP-229ENST00000460826 CNOT10Q9H9A5 744 aaKnown RBP13.4□□□□□ -0.26
HDLBP-229ENST00000460826 SERTAD3Q9UJW9 196 aa13.4□□□□□ -0.26
HDLBP-229ENST00000460826 TMEM184BQ9Y519 407 aaPredicted RBP13.4□□□□□ -0.26
HDLBP-229ENST00000460826 KCNE2Q9Y6J6 123 aa13.4□□□□□ -0.26
HDLBP-229ENST00000460826 ZZEF1O43149 2961 aa13.4□□□□□ -0.26
HDLBP-229ENST00000460826 PTPRQQ9UMZ3 2332 aa13.4□□□□□ -0.26
HDLBP-229ENST00000460826 LAMA5O15230 3695 aa13.4□□□□□ -0.27
HDLBP-229ENST00000460826 A8MT66 165 aa13.39□□□□□ -0.27
HDLBP-229ENST00000460826 H0YGG7 62 aa13.39□□□□□ -0.27
HDLBP-229ENST00000460826 K7EPI3 171 aa13.39□□□□□ -0.27
HDLBP-229ENST00000460826 COPEO14579 308 aa13.39□□□□□ -0.27
HDLBP-229ENST00000460826 GLRA3O75311 464 aa13.39□□□□□ -0.27
HDLBP-229ENST00000460826 OR2B3O76000 313 aa13.39□□□□□ -0.27
HDLBP-229ENST00000460826 STATHP02808 62 aa13.39□□□□□ -0.27
HDLBP-229ENST00000460826 EZRP15311 586 aaKnown RBP13.39□□□□□ -0.27
HDLBP-229ENST00000460826 H2AFXP16104 143 aaPredicted RBP13.39□□□□□ -0.27
HDLBP-229ENST00000460826 HRH2P25021 359 aa13.39□□□□□ -0.27
HDLBP-229ENST00000460826 BCL6P41182 706 aa13.39□□□□□ -0.27
HDLBP-229ENST00000460826 GCGRP47871 477 aa13.39□□□□□ -0.27
HDLBP-229ENST00000460826 CCR8P51685 355 aa13.39□□□□□ -0.27
HDLBP-229ENST00000460826 ARF3P61204 181 aaPredicted RBP13.39□□□□□ -0.27
HDLBP-229ENST00000460826 PCBP2Q15366 365 aaKnown RBP eCLIP13.39□□□□□ -0.27
HDLBP-229ENST00000460826 PDK4Q16654 411 aa13.39□□□□□ -0.27
HDLBP-229ENST00000460826 NXPE4Q6UWF7 544 aa13.39□□□□□ -0.27
HDLBP-229ENST00000460826 SLCO4C1Q6ZQN7 724 aa13.39□□□□□ -0.27
HDLBP-229ENST00000460826 VN1R4Q7Z5H5 301 aa13.39□□□□□ -0.27
HDLBP-229ENST00000460826 PROSER1Q86XN7 944 aa13.39□□□□□ -0.27
HDLBP-229ENST00000460826 DTX1Q86Y01 620 aa13.39□□□□□ -0.27
HDLBP-229ENST00000460826 ZNF655Q8N720 491 aaPredicted RBP13.39□□□□□ -0.27
HDLBP-229ENST00000460826 BANPQ8N9N5 519 aa13.39□□□□□ -0.27
HDLBP-229ENST00000460826 KDF1Q8NAX2 398 aaPredicted RBP13.39□□□□□ -0.27
HDLBP-229ENST00000460826 GALNT6Q8NCL4 622 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms