RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 MYOCQ99972 504 aa8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 DUSP26Q9BV47 211 aa8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 POLR2J3Q9H1A7 115 aaKnown RBP8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 Q9N2J8 555 aa8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 LRRC42Q9Y546 428 aa8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 SLX4Q8IY92 1834 aa8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 TMEM88BA6NKF7 163 aa8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 ZNF99A8MXY4 864 aaPredicted RBP8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 HSPA12AO43301 675 aa8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 BUD23O43709 281 aaKnown RBP8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 IL33O95760 270 aa8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 CSNK2A2P19784 350 aaPredicted RBP8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 ABCG1P45844 678 aa8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 ECT2LQ008S8 904 aa8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 ZNF45Q02386 682 aa8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 SF3B4Q15427 424 aaKnown RBP eCLIP8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 FAM110CQ1W6H9 321 aa8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 SERPINA9Q86WD7 417 aa8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 ZNF101Q8IZC7 436 aa8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 NXPE1Q8N323 547 aa8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 GSTCDQ8NEC7 633 aa8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 SLC13A3Q8WWT9 602 aa8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 KCNJ9Q92806 393 aa8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 LRRC4CQ9HCJ2 640 aa8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 REXO2Q9Y3B8 237 aaKnown RBP8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 BORCS7-ASMTA0A0B4J1R7 106 aa8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 CPSF4LA6NMK7 179 aaKnown RBP8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 TBX1O43435 398 aa8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 LPLP06858 475 aa8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 DUSP3P51452 185 aaPredicted RBP8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 SEC13P55735 322 aa8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 PLP2Q04941 152 aa8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 GNMTQ14749 295 aa8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 BORCS7Q96B45 105 aa8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 LRRC3Q9BY71 257 aa8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 SLC29A3Q9BZD2 475 aa8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 DNAJB9Q9UBS3 223 aa8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 ARHGEF17Q96PE2 2063 aaPredicted RBP8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 MUSKO15146 869 aa8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 LIMK2P53671 638 aa8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 SLC5A3P53794 718 aa8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 CHAF1BQ13112 559 aa8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 SEMA5AQ13591 1074 aa8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 NOMO1Q15155 1222 aa8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 KIAA0319Q5VV43 1072 aa8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 TSEN2Q8NCE0 465 aaKnown RBP8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 OR52J3Q8NH60 311 aa8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 CEP295NLQ96MC4 621 aa8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 DNAJC5Q9H3Z4 198 aa8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 SNX10Q9Y5X0 201 aa8.68□□□□□ -1.02
SHROOM4-203ENST00000460112 TP53I11O14683 189 aa8.67□□□□□ -1.02
SHROOM4-203ENST00000460112 STBD1O95210 358 aa8.67□□□□□ -1.02
SHROOM4-203ENST00000460112 MT-ND5P03915 603 aa8.67□□□□□ -1.02
SHROOM4-203ENST00000460112 MATN1P21941 496 aa8.67□□□□□ -1.02
SHROOM4-203ENST00000460112 RAB30Q15771 203 aa8.67□□□□□ -1.02
SHROOM4-203ENST00000460112 ZNF829Q3KNS6 432 aaPredicted RBP8.67□□□□□ -1.02
SHROOM4-203ENST00000460112 SCGB1C1Q8TD33 95 aa8.67□□□□□ -1.02
SHROOM4-203ENST00000460112 DPYSL5Q9BPU6 564 aa8.67□□□□□ -1.02
SHROOM4-203ENST00000460112 NPLQ9BXD5 320 aaPredicted RBP8.67□□□□□ -1.02
SHROOM4-203ENST00000460112 ZNF700Q9H0M5 742 aa8.67□□□□□ -1.02
SHROOM4-203ENST00000460112 FLRT1Q9NZU1 646 aa8.67□□□□□ -1.02
SHROOM4-203ENST00000460112 TNFRSF10DQ9UBN6 386 aa8.67□□□□□ -1.02
SHROOM4-203ENST00000460112 TP53BP1Q12888 1972 aaPredicted RBP8.67□□□□□ -1.02
SHROOM4-203ENST00000460112 RAD51DO75771 328 aa8.67□□□□□ -1.02
SHROOM4-203ENST00000460112 ITGA5P08648 1049 aa8.67□□□□□ -1.02
SHROOM4-203ENST00000460112 PIRTP0C851 137 aa8.67□□□□□ -1.02
SHROOM4-203ENST00000460112 PRPS1L1P21108 318 aa8.67□□□□□ -1.02
SHROOM4-203ENST00000460112 CSTF2P33240 577 aaKnown RBP eCLIP8.67□□□□□ -1.02
SHROOM4-203ENST00000460112 FMO1Q01740 532 aa8.67□□□□□ -1.02
SHROOM4-203ENST00000460112 CA9Q16790 459 aa8.67□□□□□ -1.02
SHROOM4-203ENST00000460112 OTOP3Q7RTS5 596 aa8.67□□□□□ -1.02
SHROOM4-203ENST00000460112 AMIGO2Q86SJ2 522 aa8.67□□□□□ -1.02
SHROOM4-203ENST00000460112 OSTF1Q92882 214 aa8.67□□□□□ -1.02
SHROOM4-203ENST00000460112 CMTM7Q96FZ5 175 aa8.67□□□□□ -1.02
SHROOM4-203ENST00000460112 IL17RBQ9NRM6 502 aa8.67□□□□□ -1.02
SHROOM4-203ENST00000460112 A0A1B0GVI7 797 aa8.67□□□□□ -1.02
SHROOM4-203ENST00000460112 CCDC85CA6NKD9 419 aa8.67□□□□□ -1.02
SHROOM4-203ENST00000460112 SCGB1D2O95969 90 aa8.67□□□□□ -1.02
SHROOM4-203ENST00000460112 GSTT2P0CG29 244 aa8.67□□□□□ -1.02
SHROOM4-203ENST00000460112 IRF2P14316 349 aa8.67□□□□□ -1.02
SHROOM4-203ENST00000460112 GNG2P59768 71 aa8.67□□□□□ -1.02
SHROOM4-203ENST00000460112 MFSD2AQ8NA29 543 aa8.67□□□□□ -1.02
SHROOM4-203ENST00000460112 AKT1S1Q96B36 256 aa8.67□□□□□ -1.02
SHROOM4-203ENST00000460112 ACTR6Q9GZN1 396 aa8.67□□□□□ -1.02
SHROOM4-203ENST00000460112 KATNBL1Q9H079 304 aa8.67□□□□□ -1.02
SHROOM4-203ENST00000460112 BRD7Q9NPI1 651 aa8.67□□□□□ -1.02
SHROOM4-203ENST00000460112 FTCDNL1E5RQL4 147 aa8.67□□□□□ -1.02
SHROOM4-203ENST00000460112 CCL23P55773 120 aa8.67□□□□□ -1.02
SHROOM4-203ENST00000460112 FOXK1P85037 733 aa8.67□□□□□ -1.02
SHROOM4-203ENST00000460112 SCIMPQ6UWF3 145 aa8.67□□□□□ -1.02
SHROOM4-203ENST00000460112 IRF2BP2Q7Z5L9 587 aa8.67□□□□□ -1.02
SHROOM4-203ENST00000460112 PAQR7Q86WK9 346 aa8.67□□□□□ -1.02
SHROOM4-203ENST00000460112 DNAAF1Q8NEP3 725 aa8.67□□□□□ -1.02
SHROOM4-203ENST00000460112 S100A16Q96FQ6 103 aaKnown RBP8.67□□□□□ -1.02
SHROOM4-203ENST00000460112 COPS4Q9BT78 406 aa8.67□□□□□ -1.02
SHROOM4-203ENST00000460112 METTL7AQ9H8H3 244 aa8.67□□□□□ -1.02
SHROOM4-203ENST00000460112 CXorf21Q9HAI6 301 aa8.67□□□□□ -1.02
SHROOM4-203ENST00000460112 RGPD1P0DJD0 1748 aa8.67□□□□□ -1.02
SHROOM4-203ENST00000460112 WNT9AO14904 365 aa8.67□□□□□ -1.02
SHROOM4-203ENST00000460112 GP1BBP13224 206 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms