RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 PCOLCEQ15113 449 aa7.48□□□□□ -1.21
HPS4-207ENST00000459918 MAPKAPK3Q16644 382 aa7.48□□□□□ -1.21
HPS4-207ENST00000459918 MEP1AQ16819 746 aa7.48□□□□□ -1.21
HPS4-207ENST00000459918 SYT16Q17RD7 645 aa7.48□□□□□ -1.21
HPS4-207ENST00000459918 HKDC1Q2TB90 917 aa7.48□□□□□ -1.21
HPS4-207ENST00000459918 P3H1Q32P28 736 aa7.48□□□□□ -1.21
HPS4-207ENST00000459918 FASTKD1Q53R41 847 aaKnown RBP7.48□□□□□ -1.21
HPS4-207ENST00000459918 CES4AQ5XG92 561 aa7.48□□□□□ -1.21
HPS4-207ENST00000459918 TUBA3EQ6PEY2 450 aa7.48□□□□□ -1.21
HPS4-207ENST00000459918 AFTPHQ6ULP2 937 aa7.48□□□□□ -1.21
HPS4-207ENST00000459918 CEP128Q6ZU80 1094 aa7.48□□□□□ -1.21
HPS4-207ENST00000459918 BBS12Q6ZW61 710 aa7.48□□□□□ -1.21
HPS4-207ENST00000459918 TAOK1Q7L7X3 1001 aa7.48□□□□□ -1.21
HPS4-207ENST00000459918 GALNTL5Q7Z4T8 443 aa7.48□□□□□ -1.21
HPS4-207ENST00000459918 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.48□□□□□ -1.21
HPS4-207ENST00000459918 VRK3Q8IV63 474 aa7.48□□□□□ -1.21
HPS4-207ENST00000459918 KRT222Q8N1A0 295 aa7.48□□□□□ -1.21
HPS4-207ENST00000459918 OR8K1Q8NGG5 319 aa7.48□□□□□ -1.21
HPS4-207ENST00000459918 MAGEC3Q8TD91 643 aa7.48□□□□□ -1.21
HPS4-207ENST00000459918 MCOLN3Q8TDD5 553 aa7.48□□□□□ -1.21
HPS4-207ENST00000459918 MVB12AQ96EY5 273 aa7.48□□□□□ -1.21
HPS4-207ENST00000459918 MRFAP1L1Q96HT8 127 aa7.48□□□□□ -1.21
HPS4-207ENST00000459918 C10orf90Q96M02 699 aa7.48□□□□□ -1.21
HPS4-207ENST00000459918 SIGLEC12Q96PQ1 595 aa7.48□□□□□ -1.21
HPS4-207ENST00000459918 SCN2AQ99250 2005 aa7.48□□□□□ -1.21
HPS4-207ENST00000459918 DPH7Q9BTV6 452 aa7.48□□□□□ -1.21
HPS4-207ENST00000459918 HES7Q9BYE0 225 aa7.48□□□□□ -1.21
HPS4-207ENST00000459918 DRC3Q9H069 523 aa7.48□□□□□ -1.21
HPS4-207ENST00000459918 MRPS30Q9NP92 439 aaKnown RBP7.48□□□□□ -1.21
HPS4-207ENST00000459918 RUVBL2Q9Y230 463 aaKnown RBP7.48□□□□□ -1.21
HPS4-207ENST00000459918 RUVBL1Q9Y265 456 aaKnown RBP7.48□□□□□ -1.21
HPS4-207ENST00000459918 IGLV3-12A0A075B6K2 115 aa7.47□□□□□ -1.21
HPS4-207ENST00000459918 KRT87PA6NCN2 255 aa7.47□□□□□ -1.21
HPS4-207ENST00000459918 NKX2-6A6NCS4 301 aa7.47□□□□□ -1.21
HPS4-207ENST00000459918 USP27XA6NNY8 438 aa7.47□□□□□ -1.21
HPS4-207ENST00000459918 E7EVH7 732 aa7.47□□□□□ -1.21
HPS4-207ENST00000459918 E9PLN8 166 aa7.47□□□□□ -1.21
HPS4-207ENST00000459918 TFECO14948 347 aaPredicted RBP7.47□□□□□ -1.21
HPS4-207ENST00000459918 ASNA1O43681 348 aa7.47□□□□□ -1.21
HPS4-207ENST00000459918 SLCO2B1O94956 709 aa7.47□□□□□ -1.21
HPS4-207ENST00000459918 PKMP14618 531 aaKnown RBP7.47□□□□□ -1.21
HPS4-207ENST00000459918 NAP1L1P55209 391 aaKnown RBP7.47□□□□□ -1.21
HPS4-207ENST00000459918 ACTN3Q08043 901 aaPredicted RBP7.47□□□□□ -1.21
HPS4-207ENST00000459918 TRIM14Q14142 442 aa7.47□□□□□ -1.21
HPS4-207ENST00000459918 NDUFA9Q16795 377 aa7.47□□□□□ -1.21
HPS4-207ENST00000459918 AARS2Q5JTZ9 985 aaKnown RBP7.47□□□□□ -1.21
HPS4-207ENST00000459918 THEMIS2Q5TEJ8 643 aa7.47□□□□□ -1.21
HPS4-207ENST00000459918 MEI1Q5TIA1 1274 aa7.47□□□□□ -1.21
HPS4-207ENST00000459918 SPINK14Q6IE38 97 aa7.47□□□□□ -1.21
HPS4-207ENST00000459918 DENND5AQ6IQ26 1287 aa7.47□□□□□ -1.21
HPS4-207ENST00000459918 LRRC8BQ6P9F7 803 aa7.47□□□□□ -1.21
HPS4-207ENST00000459918 PPP1R21Q6ZMI0 780 aa7.47□□□□□ -1.21
HPS4-207ENST00000459918 LANCL3Q6ZV70 420 aa7.47□□□□□ -1.21
HPS4-207ENST00000459918 RNF44Q7L0R7 432 aa7.47□□□□□ -1.21
HPS4-207ENST00000459918 OTOAQ7RTW8 1153 aa7.47□□□□□ -1.21
HPS4-207ENST00000459918 LINC00523Q86TU6 105 aa7.47□□□□□ -1.21
HPS4-207ENST00000459918 CD163Q86VB7 1156 aa7.47□□□□□ -1.21
HPS4-207ENST00000459918 CRLF3Q8IUI8 442 aa7.47□□□□□ -1.21
HPS4-207ENST00000459918 SLC5A8Q8N695 610 aa7.47□□□□□ -1.21
HPS4-207ENST00000459918 PHF10Q8WUB8 498 aaKnown RBP7.47□□□□□ -1.21
HPS4-207ENST00000459918 NRGNQ92686 78 aa7.47□□□□□ -1.21
HPS4-207ENST00000459918 FRMD6Q96NE9 622 aa7.47□□□□□ -1.21
HPS4-207ENST00000459918 ZNF285Q96NJ3 590 aa7.47□□□□□ -1.21
HPS4-207ENST00000459918 PANX3Q96QZ0 392 aa7.47□□□□□ -1.21
HPS4-207ENST00000459918 VKORC1Q9BQB6 163 aa7.47□□□□□ -1.21
HPS4-207ENST00000459918 MENTQ9BUN1 341 aa7.47□□□□□ -1.21
HPS4-207ENST00000459918 ENKD1Q9H0I2 346 aa7.47□□□□□ -1.21
HPS4-207ENST00000459918 NHEJ1Q9H9Q4 299 aaPredicted RBP7.47□□□□□ -1.21
HPS4-207ENST00000459918 KCNJ16Q9NPI9 418 aa7.47□□□□□ -1.21
HPS4-207ENST00000459918 LRFN1Q9P244 771 aa7.47□□□□□ -1.21
HPS4-207ENST00000459918 GNPTGQ9UJJ9 305 aa7.47□□□□□ -1.21
HPS4-207ENST00000459918 ZNF835Q9Y2P0 537 aa7.47□□□□□ -1.21
HPS4-207ENST00000459918 ALG6Q9Y672 507 aa7.47□□□□□ -1.21
HPS4-207ENST00000459918 NAV3Q8IVL0 2385 aa7.47□□□□□ -1.21
HPS4-207ENST00000459918 HCFC1P51610 2035 aa7.47□□□□□ -1.21
HPS4-207ENST00000459918 ANKHD1Q8IWZ3 2542 aaKnown RBP7.46□□□□□ -1.21
HPS4-207ENST00000459918 LOC102723996A0A087X1L8 192 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 A0A1B0GTL3 188 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 GOLGA6L9A6NEM1 432 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 GABRR3A8MPY1 467 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 TXNDC9O14530 226 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 PRMT3O60678 531 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 PHF2O75151 1096 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 SLC25A12O75746 678 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 ZNF189O75820 626 aaPredicted RBP7.46□□□□□ -1.22
HPS4-207ENST00000459918 WISP2O76076 250 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 TJP3O95049 919 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 CCNDBP1O95273 360 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 GOT2P00505 430 aaKnown RBP7.46□□□□□ -1.22
HPS4-207ENST00000459918 STATHP02808 62 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 SP1P08047 785 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 KLK2P20151 261 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 CHRNB4P30926 498 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 DNAJA1P31689 397 aaKnown RBP7.46□□□□□ -1.22
HPS4-207ENST00000459918 FOXN2P32314 431 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 PTGS2P35354 604 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 CD96P40200 585 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 SLC26A3P40879 764 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 CCNFP41002 786 aa7.46□□□□□ -1.22
HPS4-207ENST00000459918 IST1P53990 364 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms