RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 THAP4Q8WY91 577 aa15.45■□□□□ 0.06
CD28-203ENST00000458610 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.45■□□□□ 0.06
CD28-203ENST00000458610 UBXN10Q96LJ8 280 aa15.45■□□□□ 0.06
CD28-203ENST00000458610 OR2A5Q96R48 311 aa15.45■□□□□ 0.06
CD28-203ENST00000458610 CAPS2Q9BXY5 557 aa15.45■□□□□ 0.06
CD28-203ENST00000458610 ACTL8Q9H568 366 aa15.45■□□□□ 0.06
CD28-203ENST00000458610 CNOT10Q9H9A5 744 aaKnown RBP15.45■□□□□ 0.06
CD28-203ENST00000458610 AKIRIN1Q9H9L7 192 aaPredicted RBP15.45■□□□□ 0.06
CD28-203ENST00000458610 DHCR7Q9UBM7 475 aaKnown RBP15.45■□□□□ 0.06
CD28-203ENST00000458610 KCNE2Q9Y6J6 123 aa15.45■□□□□ 0.06
CD28-203ENST00000458610 LOC105369274A0A096LPK9 316 aa15.44■□□□□ 0.06
CD28-203ENST00000458610 IGKV1-8A0A0C4DH67 115 aa15.44■□□□□ 0.06
CD28-203ENST00000458610 LOC102723532A0A0G2JNH3 316 aa15.44■□□□□ 0.06
CD28-203ENST00000458610 PRPF4O43172 522 aaKnown RBP eCLIP15.44■□□□□ 0.06
CD28-203ENST00000458610 ONECUT2O95948 504 aa15.44■□□□□ 0.06
CD28-203ENST00000458610 ALBP02768 609 aa15.44■□□□□ 0.06
CD28-203ENST00000458610 LTA4HP09960 611 aaKnown RBP15.44■□□□□ 0.06
CD28-203ENST00000458610 PRKAR1AP10644 381 aa15.44■□□□□ 0.06
CD28-203ENST00000458610 TYK2P29597 1187 aa15.44■□□□□ 0.06
CD28-203ENST00000458610 PMS2P54278 862 aa15.44■□□□□ 0.06
CD28-203ENST00000458610 YBX1P67809 324 aaKnown RBP15.44■□□□□ 0.06
CD28-203ENST00000458610 CYP4F2P78329 520 aa15.44■□□□□ 0.06
CD28-203ENST00000458610 ERV3-1Q14264 604 aa15.44■□□□□ 0.06
CD28-203ENST00000458610 EFTUD2Q15029 972 aaKnown RBP eCLIP15.44■□□□□ 0.06
CD28-203ENST00000458610 NCF4Q15080 339 aa15.44■□□□□ 0.06
CD28-203ENST00000458610 TGFBIQ15582 683 aa15.44■□□□□ 0.06
CD28-203ENST00000458610 TBR1Q16650 682 aa15.44■□□□□ 0.06
CD28-203ENST00000458610 NDUFA9Q16795 377 aa15.44■□□□□ 0.06
CD28-203ENST00000458610 FAM83EQ2M2I3 478 aa15.44■□□□□ 0.06
CD28-203ENST00000458610 C1orf189Q5VU69 101 aa15.44■□□□□ 0.06
CD28-203ENST00000458610 MLIPQ5VWP3 458 aa15.44■□□□□ 0.06
CD28-203ENST00000458610 ZNF385CQ66K41 422 aaPredicted RBP15.44■□□□□ 0.06
CD28-203ENST00000458610 SULT1C3Q6IMI6 304 aa15.44■□□□□ 0.06
CD28-203ENST00000458610 FRMPD2BQ6IN97 320 aa15.44■□□□□ 0.06
CD28-203ENST00000458610 PRMT9Q6P2P2 845 aa15.44■□□□□ 0.06
CD28-203ENST00000458610 OR4N4Q8N0Y3 316 aa15.44■□□□□ 0.06
CD28-203ENST00000458610 CSNK1A1LQ8N752 337 aa15.44■□□□□ 0.06
CD28-203ENST00000458610 ENDOVQ8N8Q3 282 aaKnown RBP15.44■□□□□ 0.06
CD28-203ENST00000458610 SLC44A1Q8WWI5 657 aa15.44■□□□□ 0.06
CD28-203ENST00000458610 TTC9Q92623 222 aa15.44■□□□□ 0.06
CD28-203ENST00000458610 KIAA1191Q96A73 305 aa15.44■□□□□ 0.06
CD28-203ENST00000458610 CCDC77Q9BR77 488 aa15.44■□□□□ 0.06
CD28-203ENST00000458610 STARD5Q9NSY2 213 aa15.44■□□□□ 0.06
CD28-203ENST00000458610 CUEDC1Q9NWM3 386 aaPredicted RBP15.44■□□□□ 0.06
CD28-203ENST00000458610 RNF112Q9ULX5 631 aa15.44■□□□□ 0.06
CD28-203ENST00000458610 POLHQ9Y253 713 aa15.44■□□□□ 0.06
CD28-203ENST00000458610 CDC14CA4D256 554 aa15.43■□□□□ 0.06
CD28-203ENST00000458610 H2AFYO75367 372 aaKnown RBP15.43■□□□□ 0.06
CD28-203ENST00000458610 IPO13O94829 963 aaKnown RBP15.43■□□□□ 0.06
CD28-203ENST00000458610 CTSBP07858 339 aa15.43■□□□□ 0.06
CD28-203ENST00000458610 ABHD2P08910 425 aa15.43■□□□□ 0.06
CD28-203ENST00000458610 GCGRP47871 477 aa15.43■□□□□ 0.06
CD28-203ENST00000458610 SERPINB8P50452 374 aa15.43■□□□□ 0.06
CD28-203ENST00000458610 CSNK1G2P78368 415 aa15.43■□□□□ 0.06
CD28-203ENST00000458610 UGT8Q16880 541 aa15.43■□□□□ 0.06
CD28-203ENST00000458610 TEX35Q5T0J7 233 aa15.43■□□□□ 0.06
CD28-203ENST00000458610 KLC3Q6P597 504 aa15.43■□□□□ 0.06
CD28-203ENST00000458610 THOC6Q86W42 341 aaKnown RBP15.43■□□□□ 0.06
CD28-203ENST00000458610 CAMKVQ8NCB2 501 aa15.43■□□□□ 0.06
CD28-203ENST00000458610 ABHD11Q8NFV4 315 aa15.43■□□□□ 0.06
CD28-203ENST00000458610 APOBEC4Q8WW27 367 aaKnown RBP15.43■□□□□ 0.06
CD28-203ENST00000458610 SLC5A11Q8WWX8 675 aa15.43■□□□□ 0.06
CD28-203ENST00000458610 FKBP10Q96AY3 582 aa15.43■□□□□ 0.06
CD28-203ENST00000458610 PYCR2Q96C36 320 aa15.43■□□□□ 0.06
CD28-203ENST00000458610 MVB12AQ96EY5 273 aa15.43■□□□□ 0.06
CD28-203ENST00000458610 CABS1Q96KC9 395 aa15.43■□□□□ 0.06
CD28-203ENST00000458610 IP6K3Q96PC2 410 aa15.43■□□□□ 0.06
CD28-203ENST00000458610 CD274Q9NZQ7 290 aa15.43■□□□□ 0.06
CD28-203ENST00000458610 ZNF180Q9UJW8 692 aa15.43■□□□□ 0.06
CD28-203ENST00000458610 IKZF3Q9UKT9 509 aa15.43■□□□□ 0.06
CD28-203ENST00000458610 TCFL5Q9UL49 500 aa15.43■□□□□ 0.06
CD28-203ENST00000458610 MRPS18BQ9Y676 258 aaKnown RBP15.43■□□□□ 0.06
CD28-203ENST00000458610 POC1B-GALNT4F8VUJ3 575 aa15.42■□□□□ 0.06
CD28-203ENST00000458610 HAT1O14929 419 aa15.42■□□□□ 0.06
CD28-203ENST00000458610 C2P06681 752 aa15.42■□□□□ 0.06
CD28-203ENST00000458610 SLC35E2BP0CK96 405 aa15.42■□□□□ 0.06
CD28-203ENST00000458610 CXCR2P25025 360 aa15.42■□□□□ 0.06
CD28-203ENST00000458610 PRTGQ2VWP7 1150 aa15.42■□□□□ 0.06
CD28-203ENST00000458610 DEFB109BQ30KR1 87 aa15.42■□□□□ 0.06
CD28-203ENST00000458610 LCN10Q6JVE6 187 aa15.42■□□□□ 0.06
CD28-203ENST00000458610 FAM198BQ6UWH4 519 aa15.42■□□□□ 0.06
CD28-203ENST00000458610 OVCH1Q7RTY7 1134 aa15.42■□□□□ 0.06
CD28-203ENST00000458610 CMC1Q7Z7K0 106 aa15.42■□□□□ 0.06
CD28-203ENST00000458610 RAB43Q86YS6 212 aa15.42■□□□□ 0.06
CD28-203ENST00000458610 SPATA6LQ8N4H0 392 aa15.42■□□□□ 0.06
CD28-203ENST00000458610 OR4K1Q8NGD4 311 aa15.42■□□□□ 0.06
CD28-203ENST00000458610 SLC39A7Q92504 469 aa15.42■□□□□ 0.06
CD28-203ENST00000458610 EXTL1Q92935 676 aa15.42■□□□□ 0.06
CD28-203ENST00000458610 COL26A1Q96A83 441 aa15.42■□□□□ 0.06
CD28-203ENST00000458610 PTERQ96BW5 349 aa15.42■□□□□ 0.06
CD28-203ENST00000458610 RHBDF1Q96CC6 855 aa15.42■□□□□ 0.06
CD28-203ENST00000458610 PAFAH2Q99487 392 aa15.42■□□□□ 0.06
CD28-203ENST00000458610 ADNPQ9H2P0 1102 aa15.42■□□□□ 0.06
CD28-203ENST00000458610 PELI2Q9HAT8 420 aa15.42■□□□□ 0.06
CD28-203ENST00000458610 ZNF304Q9HCX3 659 aa15.42■□□□□ 0.06
CD28-203ENST00000458610 SNX15Q9NRS6 342 aa15.42■□□□□ 0.06
CD28-203ENST00000458610 WWOXQ9NZC7 414 aa15.42■□□□□ 0.06
CD28-203ENST00000458610 NXT1Q9UKK6 140 aaKnown RBP15.42■□□□□ 0.06
CD28-203ENST00000458610 SLC22A14Q9Y267 594 aa15.42■□□□□ 0.06
CD28-203ENST00000458610 PCM1Q15154 2024 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms