RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 SEC14L1Q92503 715 aa17.86■□□□□ 0.45
USP39-209ENST00000458268 COL26A1Q96A83 441 aa17.86■□□□□ 0.45
USP39-209ENST00000458268 C17orf62Q9BQA9 187 aa17.86■□□□□ 0.45
USP39-209ENST00000458268 ZDHHC18Q9NUE0 388 aa17.86■□□□□ 0.45
USP39-209ENST00000458268 ANKMY1Q9P2S6 941 aa17.86■□□□□ 0.45
USP39-209ENST00000458268 KCNMB2Q9Y691 235 aa17.86■□□□□ 0.45
USP39-209ENST00000458268 FEZF1A0PJY2 475 aa17.85■□□□□ 0.45
USP39-209ENST00000458268 SPRP35270 261 aaPredicted RBP17.85■□□□□ 0.45
USP39-209ENST00000458268 GMPRP36959 345 aa17.85■□□□□ 0.45
USP39-209ENST00000458268 POU4F1Q01851 419 aa17.85■□□□□ 0.45
USP39-209ENST00000458268 ATMQ13315 3056 aa17.85■□□□□ 0.45
USP39-209ENST00000458268 FAM214AQ32MH5 1076 aa17.85■□□□□ 0.45
USP39-209ENST00000458268 PRICKLE2Q7Z3G6 844 aa17.85■□□□□ 0.45
USP39-209ENST00000458268 PTRH1Q86Y79 214 aaKnown RBP17.85■□□□□ 0.45
USP39-209ENST00000458268 TMEM151BQ8IW70 566 aa17.85■□□□□ 0.45
USP39-209ENST00000458268 CEP112Q8N8E3 955 aa17.85■□□□□ 0.45
USP39-209ENST00000458268 C9orf43Q8TAL5 461 aaPredicted RBP17.85■□□□□ 0.45
USP39-209ENST00000458268 FAM117AQ9C073 453 aa17.85■□□□□ 0.45
USP39-209ENST00000458268 PHACTR1Q9C0D0 580 aa17.85■□□□□ 0.45
USP39-209ENST00000458268 SYNPO2LQ9H987 977 aa17.85■□□□□ 0.45
USP39-209ENST00000458268 HEMK1Q9Y5R4 338 aaPredicted RBP17.85■□□□□ 0.45
USP39-209ENST00000458268 FFAR3O14843 346 aa17.84■□□□□ 0.45
USP39-209ENST00000458268 GPR42O15529 346 aa17.84■□□□□ 0.45
USP39-209ENST00000458268 RFPL1O75677 317 aa17.84■□□□□ 0.45
USP39-209ENST00000458268 MED26O95402 600 aa17.84■□□□□ 0.45
USP39-209ENST00000458268 ENO2P09104 434 aaPredicted RBP17.84■□□□□ 0.45
USP39-209ENST00000458268 CCDC166P0CW27 439 aa17.84■□□□□ 0.45
USP39-209ENST00000458268 EZRP15311 586 aaKnown RBP17.84■□□□□ 0.45
USP39-209ENST00000458268 STMN1P16949 149 aa17.84■□□□□ 0.45
USP39-209ENST00000458268 NR1D1P20393 614 aa17.84■□□□□ 0.45
USP39-209ENST00000458268 AP1S2P56377 157 aa17.84■□□□□ 0.45
USP39-209ENST00000458268 MEF2AQ02078 507 aaPredicted RBP17.84■□□□□ 0.45
USP39-209ENST00000458268 ATP1A4Q13733 1029 aa17.84■□□□□ 0.45
USP39-209ENST00000458268 BMPR2Q13873 1038 aa17.84■□□□□ 0.45
USP39-209ENST00000458268 CRTC2Q53ET0 693 aaPredicted RBP17.84■□□□□ 0.45
USP39-209ENST00000458268 COLEC12Q5KU26 742 aa17.84■□□□□ 0.45
USP39-209ENST00000458268 UBAP2Q5T6F2 1119 aaKnown RBP17.84■□□□□ 0.45
USP39-209ENST00000458268 GRTP1Q5TC63 336 aa17.84■□□□□ 0.45
USP39-209ENST00000458268 ZNF425Q6IV72 752 aa17.84■□□□□ 0.45
USP39-209ENST00000458268 SBSNQ6UWP8 590 aa17.84■□□□□ 0.45
USP39-209ENST00000458268 CMC1Q7Z7K0 106 aa17.84■□□□□ 0.45
USP39-209ENST00000458268 RAB43Q86YS6 212 aa17.84■□□□□ 0.45
USP39-209ENST00000458268 UHMK1Q8TAS1 419 aaKnown RBP17.84■□□□□ 0.45
USP39-209ENST00000458268 ATL1Q8WXF7 558 aa17.84■□□□□ 0.45
USP39-209ENST00000458268 TSNARE1Q96NA8 513 aa17.84■□□□□ 0.45
USP39-209ENST00000458268 MACROD1Q9BQ69 325 aa17.84■□□□□ 0.45
USP39-209ENST00000458268 TRIM55Q9BYV6 548 aa17.84■□□□□ 0.45
USP39-209ENST00000458268 PCBD2Q9H0N5 130 aa17.84■□□□□ 0.45
USP39-209ENST00000458268 SOX17Q9H6I2 414 aaPredicted RBP17.84■□□□□ 0.45
USP39-209ENST00000458268 ACSS2Q9NR19 701 aa17.84■□□□□ 0.45
USP39-209ENST00000458268 GEMIN8Q9NWZ8 242 aaKnown RBP17.84■□□□□ 0.45
USP39-209ENST00000458268 NINJ2Q9NZG7 142 aa17.84■□□□□ 0.45
USP39-209ENST00000458268 TLK1Q9UKI8 766 aa17.84■□□□□ 0.45
USP39-209ENST00000458268 RUVBL1Q9Y265 456 aaKnown RBP17.84■□□□□ 0.45
USP39-209ENST00000458268 KLK4Q9Y5K2 254 aa17.84■□□□□ 0.45
USP39-209ENST00000458268 TNRC6AQ8NDV7 1962 aaKnown RBP17.84■□□□□ 0.45
USP39-209ENST00000458268 A6NL46 340 aa17.83■□□□□ 0.44
USP39-209ENST00000458268 P2RX6O15547 441 aa17.83■□□□□ 0.44
USP39-209ENST00000458268 CNOT3O75175 753 aaKnown RBP17.83■□□□□ 0.44
USP39-209ENST00000458268 ACSL3O95573 720 aa17.83■□□□□ 0.44
USP39-209ENST00000458268 SERPIND1P05546 499 aa17.83■□□□□ 0.44
USP39-209ENST00000458268 RHOXF2BP0C7M4 288 aa17.83■□□□□ 0.44
USP39-209ENST00000458268 PIM1P11309 404 aaPredicted RBP17.83■□□□□ 0.44
USP39-209ENST00000458268 ITGAXP20702 1163 aa17.83■□□□□ 0.44
USP39-209ENST00000458268 FBLP22087 321 aaKnown RBP17.83■□□□□ 0.44
USP39-209ENST00000458268 CCND1P24385 295 aa17.83■□□□□ 0.44
USP39-209ENST00000458268 PHBP35232 272 aa17.83■□□□□ 0.44
USP39-209ENST00000458268 CCL11P51671 97 aa17.83■□□□□ 0.44
USP39-209ENST00000458268 CBLBQ13191 982 aa17.83■□□□□ 0.44
USP39-209ENST00000458268 CSHL1Q14406 222 aa17.83■□□□□ 0.44
USP39-209ENST00000458268 MUM1Q2TAK8 710 aa17.83■□□□□ 0.44
USP39-209ENST00000458268 LCTLQ6UWM7 567 aa17.83■□□□□ 0.44
USP39-209ENST00000458268 ZCCHC10Q8TBK6 192 aa17.83■□□□□ 0.44
USP39-209ENST00000458268 FBXL8Q96CD0 374 aa17.83■□□□□ 0.44
USP39-209ENST00000458268 ABHD17AQ96GS6 310 aa17.83■□□□□ 0.44
USP39-209ENST00000458268 C10orf90Q96M02 699 aa17.83■□□□□ 0.44
USP39-209ENST00000458268 FMO2Q99518 471 aa17.83■□□□□ 0.44
USP39-209ENST00000458268 GPR22Q99680 433 aa17.83■□□□□ 0.44
USP39-209ENST00000458268 RHOXF2Q9BQY4 288 aa17.83■□□□□ 0.44
USP39-209ENST00000458268 DHRS4Q9BTZ2 278 aa17.83■□□□□ 0.44
USP39-209ENST00000458268 ZNF304Q9HCX3 659 aa17.83■□□□□ 0.44
USP39-209ENST00000458268 PRM3Q9NNZ6 103 aa17.83■□□□□ 0.44
USP39-209ENST00000458268 SLC22A11Q9NSA0 550 aa17.83■□□□□ 0.44
USP39-209ENST00000458268 TMEM184CQ9NVA4 438 aa17.83■□□□□ 0.44
USP39-209ENST00000458268 CTSFQ9UBX1 484 aa17.83■□□□□ 0.44
USP39-209ENST00000458268 DYRK1BQ9Y463 629 aa17.83■□□□□ 0.44
USP39-209ENST00000458268 SCN3AQ9NY46 2000 aa17.82■□□□□ 0.44
USP39-209ENST00000458268 MKRN2OSH3BPM6 223 aa17.82■□□□□ 0.44
USP39-209ENST00000458268 ANXA5P08758 320 aa17.82■□□□□ 0.44
USP39-209ENST00000458268 SFTPCP11686 197 aa17.82■□□□□ 0.44
USP39-209ENST00000458268 GRK3P35626 688 aa17.82■□□□□ 0.44
USP39-209ENST00000458268 CSNK1G2P78368 415 aa17.82■□□□□ 0.44
USP39-209ENST00000458268 RAPSNQ13702 412 aa17.82■□□□□ 0.44
USP39-209ENST00000458268 C18orf21Q32NC0 220 aaPredicted RBP17.82■□□□□ 0.44
USP39-209ENST00000458268 FBXO48Q5FWF7 155 aa17.82■□□□□ 0.44
USP39-209ENST00000458268 YOD1Q5VVQ6 348 aaPredicted RBP17.82■□□□□ 0.44
USP39-209ENST00000458268 ZNF605Q86T29 641 aa17.82■□□□□ 0.44
USP39-209ENST00000458268 ADAMTSL2Q86TH1 951 aa17.82■□□□□ 0.44
USP39-209ENST00000458268 THAP4Q8WY91 577 aa17.82■□□□□ 0.44
USP39-209ENST00000458268 MMABQ96EY8 250 aaPredicted RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms