RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 POLR2LP62875 67 aaKnown RBP3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 YBX1P67809 324 aaKnown RBP3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 RPP38P78345 283 aaKnown RBP3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 PHC1P78364 1004 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 SMAD3P84022 425 aaKnown RBP3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 ARF5P84085 180 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 SPIBQ01892 262 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 CREMQ03060 361 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 PRKCDQ05655 676 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 RUNX1T1Q06455 604 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 PIGFQ07326 219 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 RBBP4Q09028 425 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 FCHO2Q0JRZ9 810 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 NPRL3Q12980 569 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 MTAPQ13126 283 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 CHIT1Q13231 466 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 DMC1Q14565 340 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 CHRNA6Q15825 494 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 PHKG1Q16816 387 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 TIGD6Q17RP2 521 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 ZNF630Q2M218 657 aaPredicted RBP3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 TRIM71Q2Q1W2 868 aaKnown RBP3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 ADPRMQ3LIE5 342 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 GTDC1Q4AE62 458 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 MPPE1Q53F39 396 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 IFI44LQ53G44 452 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 XKR6Q5GH73 641 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 COLEC12Q5KU26 742 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 TPRG1LQ5T0D9 272 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 GCNT6Q5T4J0 391 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 ATXN7L2Q5T6C5 722 aaPredicted RBP3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 ATAD3BQ5T9A4 648 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 TMEM236Q5W0B7 351 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 FAM219BQ5XKK7 198 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 TPGS2Q68CL5 300 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 HIST2H2AA3Q6FI13 130 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 OR4F3Q6IEY1 312 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 PDE12Q6L8Q7 609 aaKnown RBP3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 CXorf57Q6NSI4 855 aaKnown RBP3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 NOXRED1Q6NXP6 359 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 TMEM53Q6P2H8 277 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 FAHD1Q6P587 224 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 TRIM40Q6P9F5 258 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 SUSD1Q6UWL2 747 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 ANGPTL8Q6UXH0 198 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 TPRG1Q6ZUI0 275 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 AHSA2Q719I0 299 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 CCDC80Q76M96 950 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 RBM23Q86U06 439 aaKnown RBP3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 ZBTB46Q86UZ6 589 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 SLC22A16Q86VW1 577 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 CYP4Z1Q86W10 505 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 ANKRD46Q86W74 232 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 ZSWIM9Q86XI8 627 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 RASAL3Q86YV0 1011 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 IFNL1Q8IU54 200 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 SPNS2Q8IVW8 549 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 CCDC103Q8IW40 242 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 NPAS3Q8IXF0 933 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 PLPP6Q8IY26 295 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 CHPFQ8IZ52 775 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 HS3ST5Q8IZT8 346 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 TAGAPQ8N103 731 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 SYNPOQ8N3V7 929 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 MFSD4AQ8N468 514 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 CPA6Q8N4T0 437 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 OXR1Q8N573 874 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 TTC9BQ8N6N2 239 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 KIAA1958Q8N8K9 716 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 POC5Q8NA72 575 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 DENND6BQ8NEG7 585 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 TRPV1Q8NER1 839 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 FLCNQ8NFG4 579 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 ST13P5Q8NFI4 369 aaPredicted RBP3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 OR10G2Q8NGC3 310 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 OR8J2Q8NGG1 315 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 OR4A15Q8NGL6 344 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 RHOXF1Q8NHV9 184 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 NDNFQ8TB73 568 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 SETD6Q8TBK2 473 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 SPPL2AQ8TCT8 520 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 LKAAEAR1Q8TD35 194 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 ZFP90Q8TF47 636 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 CHTF18Q8WVB6 975 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 PIH1D2Q8WWB5 315 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 ASZ1Q8WWH4 475 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 GEMIN6Q8WXD5 167 aaKnown RBP3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 ELMO1Q92556 727 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 UPF1Q92900 1129 aaKnown RBP eCLIP3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 TMCO6Q96DC7 493 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 MTFMTQ96DP5 389 aaKnown RBP3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 LGALS12Q96DT0 336 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 MYEOVQ96EZ4 313 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 TRMT2BQ96GJ1 504 aaKnown RBP3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 PPP1R16AQ96I34 528 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 TXNDC15Q96J42 360 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 HRASLS5Q96KN8 279 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 APOLD1Q96LR9 279 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 Q96MT0 163 aa3.23□□□□□ -1.89
HMGN1P18-201ENST00000457642 LYSMD1Q96S90 227 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms