RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 PADI2Q9Y2J8 665 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 PTRH2Q9Y3E5 179 aaKnown RBP5.26□□□□□ -1.57
VPS41-209ENST00000457055 HS3ST4Q9Y661 456 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 KCNE2Q9Y6J6 123 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 NUMBLQ9Y6R0 609 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 USP54Q70EL1 1684 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 QRICH2Q9H0J4 1663 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 ITSN1Q15811 1721 aa5.26□□□□□ -1.57
VPS41-209ENST00000457055 ASTN2O75129 1339 aaPredicted RBP5.25□□□□□ -1.57
VPS41-209ENST00000457055 KIF13BQ9NQT8 1826 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 K7EQM0 130 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 SCAMP2O15127 329 aaKnown RBP5.25□□□□□ -1.57
VPS41-209ENST00000457055 MDM4O15151 490 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 INPPL1O15357 1258 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 SEPT4O43236 478 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 KLK10O43240 276 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 SEC14L5O43304 696 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 COCHO43405 550 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 PFKFB2O60825 505 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 MITFO75030 526 aaPredicted RBP5.25□□□□□ -1.57
VPS41-209ENST00000457055 GPX5O75715 221 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 SIX3O95343 332 aaPredicted RBP5.25□□□□□ -1.57
VPS41-209ENST00000457055 CRYABP02511 175 aaKnown RBP5.25□□□□□ -1.57
VPS41-209ENST00000457055 ANXA2P07355 339 aaKnown RBP5.25□□□□□ -1.57
VPS41-209ENST00000457055 TFPTP0C1Z6 253 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 PRPS1L1P21108 318 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 PIK3R1P27986 724 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 HOXA13P31271 388 aaPredicted RBP5.25□□□□□ -1.57
VPS41-209ENST00000457055 DGKEP52429 567 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 STAT2P52630 851 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 NRG3P56975 720 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 ST8SIA6P61647 398 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 SLC25A3Q00325 362 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 REEP5Q00765 189 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 PDZK1IP1Q13113 114 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 PRKAA1Q13131 559 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 DMP1Q13316 513 aaPredicted RBP5.25□□□□□ -1.57
VPS41-209ENST00000457055 TP53BP2Q13625 1128 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 CAMK1Q14012 370 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 BOP1Q14137 746 aaKnown RBP5.25□□□□□ -1.57
VPS41-209ENST00000457055 SGCBQ16585 318 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 PPP1R3AQ16821 1122 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 HSDL1Q3SXM5 330 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 SLC36A3Q495N2 470 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 Q5PR19 223 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 PHYHD1Q5SRE7 291 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 MLIPQ5VWP3 458 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 WBP2NLQ6ICG8 309 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 SLFN12LQ6IEE8 588 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 PLEKHA7Q6IQ23 1121 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 PYHIN1Q6K0P9 492 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 CDC73Q6P1J9 531 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 DUS1LQ6P1R4 473 aaKnown RBP5.25□□□□□ -1.57
VPS41-209ENST00000457055 KIAA0408Q6ZU52 694 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 GAREM2Q75VX8 874 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 TRPM8Q7Z2W7 1104 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 LINC00523Q86TU6 105 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 ERICH1Q86X53 443 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 PALB2Q86YC2 1186 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 FAM185AQ8N0U4 392 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 SH2D3CQ8N5H7 860 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 MINDY1Q8N5J2 469 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 ZNF610Q8N9Z0 462 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 GLIS1Q8NBF1 620 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 C19orf18Q8NEA5 215 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 DDHD1Q8NEL9 900 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 OR5AN1Q8NGI8 311 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 OR1N1Q8NGS0 311 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 OR52N1Q8NH53 320 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 SELENOMQ8WWX9 145 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 RSC1A1Q92681 617 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 RGMAQ96B86 450 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 PHF21AQ96BD5 680 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 LRRC46Q96FV0 321 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 PLEKHA8Q96JA3 519 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 PRRC1Q96M27 445 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 ZNF578Q96N58 590 aaPredicted RBP5.25□□□□□ -1.57
VPS41-209ENST00000457055 NECTIN4Q96NY8 510 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 DGAT2Q96PD7 388 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 RANBP9Q96S59 729 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 ZNF607Q96SK3 696 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 GPHA2Q96T91 129 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 NDNQ99608 321 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 PELOQ9BRX2 385 aaKnown RBP5.25□□□□□ -1.57
VPS41-209ENST00000457055 TMEM175Q9BSA9 504 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 RTKNQ9BST9 563 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 NUP58Q9BVL2 599 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 BOCQ9BWV1 1114 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 DNTTIP1Q9H147 329 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 GPN1Q9HCN4 374 aaPredicted RBP5.25□□□□□ -1.57
VPS41-209ENST00000457055 SETD4Q9NVD3 440 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 PANK4Q9NVE7 773 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 GID8Q9NWU2 228 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 CMTM6Q9NX76 183 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 GRHL1Q9NZI5 618 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 SH3BP4Q9P0V3 963 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 CTNNAL1Q9UBT7 734 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 POLLQ9UGP5 575 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 RAB23Q9ULC3 237 aa5.25□□□□□ -1.57
VPS41-209ENST00000457055 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms