RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 GLYATQ6IB77 296 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 NIPAL3Q6P499 406 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 ZNF550Q7Z398 422 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 OR1J4Q8NGS1 313 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 HS6ST2Q96MM7 605 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 SMAD5Q99717 465 aaKnown RBP5.09□□□□□ -1.59
CSMD3-204ENST00000455883 ZSCAN5AQ9BUG6 496 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 G6PC3Q9BUM1 346 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 TARS2Q9BW92 718 aaKnown RBP5.09□□□□□ -1.59
CSMD3-204ENST00000455883 ZNF436Q9C0F3 470 aaPredicted RBP5.09□□□□□ -1.59
CSMD3-204ENST00000455883 GPR88Q9GZN0 384 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 NMUR2Q9GZQ4 415 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 FBRSQ9HAH7 460 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 TRPV4Q9HBA0 871 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 B3GAT2Q9NPZ5 323 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 NAALAD2Q9Y3Q0 740 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 DPPA5A6NC42 116 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 MICAL2O94851 1124 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 HLA-DQA2P01906 255 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 DBTP11182 482 aaKnown RBP5.09□□□□□ -1.59
CSMD3-204ENST00000455883 SCNN1BP51168 640 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 DCDC1P59894 354 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 DYNLL1P63167 89 aaKnown RBP5.09□□□□□ -1.59
CSMD3-204ENST00000455883 ARHGAP11AQ6P4F7 1023 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 UGT2A3Q6UWM9 527 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 RETREG3Q86VR2 466 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 SPPL2BQ8TCT7 592 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 OXER1Q8TDS5 423 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 ADAMTS15Q8TE58 950 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 FAM84BQ96KN1 310 aaPredicted RBP5.09□□□□□ -1.59
CSMD3-204ENST00000455883 GPER1Q99527 375 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.09□□□□□ -1.59
CSMD3-204ENST00000455883 NIPAL2Q9H841 368 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 ZNF304Q9HCX3 659 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 LCHNA4D1U4 455 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 FAM86B1E9PN63 330 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 RNASEH2AO75792 299 aaKnown RBP5.09□□□□□ -1.59
CSMD3-204ENST00000455883 PAHP00439 452 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 SERPIND1P05546 499 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 MMP2P08253 660 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 FAM86B2P0C5J1 330 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 CKMT1AP12532 417 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 SSTR1P30872 391 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 CSTF2P33240 577 aaKnown RBP eCLIP5.09□□□□□ -1.59
CSMD3-204ENST00000455883 GLP1RP43220 463 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 ST3GAL3Q11203 375 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 SF3B4Q15427 424 aaKnown RBP eCLIP5.09□□□□□ -1.59
CSMD3-204ENST00000455883 RAVER1Q8IY67 606 aaKnown RBP5.09□□□□□ -1.59
CSMD3-204ENST00000455883 ELMOD2Q8IZ81 293 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 FAM86B1Q8N7N1 296 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 OR52K1Q8NGK4 314 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 UPRTQ96BW1 309 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 RAB39BQ96DA2 213 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 METTL8Q9H825 291 aaKnown RBP5.09□□□□□ -1.59
CSMD3-204ENST00000455883 OXSMQ9NWU1 459 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 ZDHHC7Q9NXF8 308 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 LUZP4Q9P127 313 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 SNCAIPQ9Y6H5 919 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 COL1A1P02452 1464 aaPredicted RBP5.09□□□□□ -1.59
CSMD3-204ENST00000455883 SPATA31A1Q5TZJ5 1347 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 INMTO95050 263 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 HTR3BO95264 441 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 UBCP0CG48 685 aaKnown RBP5.09□□□□□ -1.59
CSMD3-204ENST00000455883 CAPN3P20807 821 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 DNASE1L1P49184 302 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 HSD11B2P80365 405 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 AADACL4Q5VUY2 407 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 C5orf46Q6UWT4 87 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 ZNF587Q96SQ5 575 aaPredicted RBP5.09□□□□□ -1.59
CSMD3-204ENST00000455883 BCL2L14Q9BZR8 327 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 TKTL2Q9H0I9 626 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 TAS2R3Q9NYW6 316 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 RNF6Q9Y252 685 aa5.09□□□□□ -1.59
CSMD3-204ENST00000455883 POLR3HQ9Y535 204 aaPredicted RBP5.09□□□□□ -1.59
CSMD3-204ENST00000455883 SLC35F4A4IF30 521 aa5.09□□□□□ -1.6
CSMD3-204ENST00000455883 STMND1H3BQB6 276 aa5.09□□□□□ -1.6
CSMD3-204ENST00000455883 ZBTB22O15209 634 aa5.09□□□□□ -1.6
CSMD3-204ENST00000455883 GRIN3BO60391 1043 aa5.09□□□□□ -1.6
CSMD3-204ENST00000455883 OR10H2O60403 315 aa5.09□□□□□ -1.6
CSMD3-204ENST00000455883 HBE1P02100 147 aa5.09□□□□□ -1.6
CSMD3-204ENST00000455883 CYP2B6P20813 491 aa5.09□□□□□ -1.6
CSMD3-204ENST00000455883 THBS3P49746 956 aa5.09□□□□□ -1.6
CSMD3-204ENST00000455883 PRKXP51817 358 aa5.09□□□□□ -1.6
CSMD3-204ENST00000455883 CAV3P56539 151 aa5.09□□□□□ -1.6
CSMD3-204ENST00000455883 SGO1Q5FBB7 561 aa5.09□□□□□ -1.6
CSMD3-204ENST00000455883 TPRA1Q86W33 373 aa5.09□□□□□ -1.6
CSMD3-204ENST00000455883 ANKRD13BQ86YJ7 626 aa5.09□□□□□ -1.6
CSMD3-204ENST00000455883 TSEN15Q8WW01 171 aaKnown RBP5.09□□□□□ -1.6
CSMD3-204ENST00000455883 RCN3Q96D15 328 aa5.09□□□□□ -1.6
CSMD3-204ENST00000455883 SLC28A3Q9HAS3 691 aa5.09□□□□□ -1.6
CSMD3-204ENST00000455883 SRRDQ9UH36 339 aa5.09□□□□□ -1.6
CSMD3-204ENST00000455883 H7C417 338 aa5.09□□□□□ -1.6
CSMD3-204ENST00000455883 RBMXL2O75526 392 aaKnown RBP5.09□□□□□ -1.6
CSMD3-204ENST00000455883 TPPPO94811 219 aa5.09□□□□□ -1.6
CSMD3-204ENST00000455883 RHOQP17081 205 aa5.09□□□□□ -1.6
CSMD3-204ENST00000455883 PBX1P40424 430 aa5.09□□□□□ -1.6
CSMD3-204ENST00000455883 TSPAN5P62079 268 aa5.09□□□□□ -1.6
CSMD3-204ENST00000455883 KIAA1161Q6NSJ0 714 aa5.09□□□□□ -1.6
CSMD3-204ENST00000455883 FBXL19Q6PCT2 694 aa5.09□□□□□ -1.6
CSMD3-204ENST00000455883 KIAA0907Q7Z7F0 614 aaPredicted RBP5.09□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms