RNA–Protein interactions for RNA: ENST00000455385.6

SYPL1-202, Transcript of synaptophysin like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYPL1, Length 2,151 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-202ENST00000455385 WDR34Q96EX3 536 aa10.32□□□□□ -0.76
SYPL1-202ENST00000455385 FCRL4Q96PJ5 515 aa10.32□□□□□ -0.76
SYPL1-202ENST00000455385 CD180Q99467 661 aa10.32□□□□□ -0.76
SYPL1-202ENST00000455385 SORT1Q99523 831 aa10.32□□□□□ -0.76
SYPL1-202ENST00000455385 PLCD4Q9BRC7 762 aa10.32□□□□□ -0.76
SYPL1-202ENST00000455385 CAPS2Q9BXY5 557 aa10.32□□□□□ -0.76
SYPL1-202ENST00000455385 TMEM184CQ9NVA4 438 aa10.32□□□□□ -0.76
SYPL1-202ENST00000455385 CDV3Q9UKY7 258 aaKnown RBP10.32□□□□□ -0.76
SYPL1-202ENST00000455385 ZNF490Q9ULM2 529 aaPredicted RBP10.32□□□□□ -0.76
SYPL1-202ENST00000455385 KCNE1BA0A087WTH5 132 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 FEZF1A0PJY2 475 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 OR2A25A4D2G3 310 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 AGRPO00253 132 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 CLGNO14967 610 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 RASSF9O75901 435 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 OR4F21O95013 312 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 KCNK5O95279 499 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 FKBP9O95302 570 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 THRAP10827 490 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 SLC1A6P48664 564 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 PIK3CGP48736 1102 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 SEPHS1P49903 392 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 NOVA1P51513 510 aaKnown RBP10.31□□□□□ -0.76
SYPL1-202ENST00000455385 CCR8P51685 355 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 CCNG1P51959 295 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 ABCE1P61221 599 aaKnown RBP10.31□□□□□ -0.76
SYPL1-202ENST00000455385 IRF8Q02556 426 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 RBBP7Q16576 425 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 CLPPQ16740 277 aaPredicted RBP10.31□□□□□ -0.76
SYPL1-202ENST00000455385 CDCP2Q5VXM1 449 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 MILR1Q7Z6M3 343 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 L3MBTL4Q8NA19 623 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 AGAP11Q8TF27 550 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 DYDC1Q8WWB3 177 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 ATP6V1E2Q96A05 226 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 ZUFSPQ96AP4 578 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 CCDC74BQ96LY2 380 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 ZNF382Q96SR6 550 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 ZMYND15Q9H091 742 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 GEMIN8Q9NWZ8 242 aaKnown RBP10.31□□□□□ -0.76
SYPL1-202ENST00000455385 PILRAQ9UKJ1 303 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 SNX7Q9UNH6 387 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 SPTBP11277 2137 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 KIF26BQ2KJY2 2108 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 MDC1Q14676 2089 aaKnown RBP10.31□□□□□ -0.76
SYPL1-202ENST00000455385 DCHS1Q96JQ0 3298 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 DCDC2BA2VCK2 349 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 HAT1O14929 419 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 SNNO75324 88 aaPredicted RBP10.31□□□□□ -0.76
SYPL1-202ENST00000455385 CCNDBP1O95273 360 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 CLDN9O95484 217 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 MLYCDO95822 493 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 GRK2P25098 689 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 MDH1P40925 334 aaKnown RBP10.31□□□□□ -0.76
SYPL1-202ENST00000455385 FOXA1P55317 472 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 TBCCQ15814 346 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 ADNP2Q6IQ32 1131 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 PRSS42Q7Z5A4 293 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 ADCK2Q7Z695 626 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 C19orf47Q8N9M1 422 aaKnown RBP10.31□□□□□ -0.76
SYPL1-202ENST00000455385 SREK1Q8WXA9 508 aaKnown RBP10.31□□□□□ -0.76
SYPL1-202ENST00000455385 KLHL6Q8WZ60 621 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 PTCD3Q96EY7 689 aaKnown RBP10.31□□□□□ -0.76
SYPL1-202ENST00000455385 KCNA7Q96RP8 456 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 DPYSL5Q9BPU6 564 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 TRMOQ9BU70 441 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 EHD1Q9H4M9 534 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 ACTR8Q9H981 624 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 PELI2Q9HAT8 420 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 MID1IP1Q9NPA3 183 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 ZDHHC2Q9UIJ5 367 aa10.31□□□□□ -0.76
SYPL1-202ENST00000455385 TMEM114B3SHH9 223 aa10.3□□□□□ -0.76
SYPL1-202ENST00000455385 KLF11O14901 512 aa10.3□□□□□ -0.76
SYPL1-202ENST00000455385 POLR3GO15318 223 aaPredicted RBP10.3□□□□□ -0.76
SYPL1-202ENST00000455385 H2AFYO75367 372 aaKnown RBP10.3□□□□□ -0.76
SYPL1-202ENST00000455385 ESRRBO95718 433 aa10.3□□□□□ -0.76
SYPL1-202ENST00000455385 OTCP00480 354 aa10.3□□□□□ -0.76
SYPL1-202ENST00000455385 CTSBP07858 339 aa10.3□□□□□ -0.76
SYPL1-202ENST00000455385 EBLN1P0CF75 366 aa10.3□□□□□ -0.76
SYPL1-202ENST00000455385 NAA20P61599 178 aa10.3□□□□□ -0.76
SYPL1-202ENST00000455385 GALNT1Q10472 559 aaPredicted RBP10.3□□□□□ -0.76
SYPL1-202ENST00000455385 SLBPQ14493 270 aaKnown RBP eCLIP10.3□□□□□ -0.76
SYPL1-202ENST00000455385 KCNAB1Q14722 419 aa10.3□□□□□ -0.76
SYPL1-202ENST00000455385 CPSF6Q16630 551 aaKnown RBP eCLIP10.3□□□□□ -0.76
SYPL1-202ENST00000455385 LIPJQ5W064 366 aa10.3□□□□□ -0.76
SYPL1-202ENST00000455385 RBM44Q6ZP01 1051 aaKnown RBP10.3□□□□□ -0.76
SYPL1-202ENST00000455385 GPRIN3Q6ZVF9 776 aa10.3□□□□□ -0.76
SYPL1-202ENST00000455385 CUZD1Q86UP6 607 aa10.3□□□□□ -0.76
SYPL1-202ENST00000455385 MYLK4Q86YV6 388 aaPredicted RBP10.3□□□□□ -0.76
SYPL1-202ENST00000455385 DNAJC22Q8N4W6 341 aa10.3□□□□□ -0.76
SYPL1-202ENST00000455385 ANKRD53Q8N9V6 530 aa10.3□□□□□ -0.76
SYPL1-202ENST00000455385 WDR48Q8TAF3 677 aa10.3□□□□□ -0.76
SYPL1-202ENST00000455385 RAB3IL1Q8TBN0 382 aa10.3□□□□□ -0.76
SYPL1-202ENST00000455385 FAM122AQ96E09 287 aa10.3□□□□□ -0.76
SYPL1-202ENST00000455385 SLC41A2Q96JW4 573 aa10.3□□□□□ -0.76
SYPL1-202ENST00000455385 MAGEB18Q96M61 343 aa10.3□□□□□ -0.76
SYPL1-202ENST00000455385 ZNF768Q9H5H4 540 aaKnown RBP10.3□□□□□ -0.76
SYPL1-202ENST00000455385 SLCO1B3Q9NPD5 702 aa10.3□□□□□ -0.76
SYPL1-202ENST00000455385 LOC105369274A0A096LPK9 316 aa10.29□□□□□ -0.76
SYPL1-202ENST00000455385 LOC102723532A0A0G2JNH3 316 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms