RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 KCNH6Q9H252 994 aa5.09□□□□□ -1.59
HMGB1P4-201ENST00000455362 EBF3Q9H4W6 596 aa5.09□□□□□ -1.59
HMGB1P4-201ENST00000455362 ECT2Q9H8V3 914 aa5.09□□□□□ -1.59
HMGB1P4-201ENST00000455362 PLAC1Q9HBJ0 212 aa5.09□□□□□ -1.59
HMGB1P4-201ENST00000455362 HPS4Q9NQG7 708 aa5.09□□□□□ -1.59
HMGB1P4-201ENST00000455362 SNX15Q9NRS6 342 aa5.09□□□□□ -1.59
HMGB1P4-201ENST00000455362 SNTG1Q9NSN8 517 aa5.09□□□□□ -1.59
HMGB1P4-201ENST00000455362 INTS10Q9NVR2 710 aaKnown RBP5.09□□□□□ -1.59
HMGB1P4-201ENST00000455362 MRPS18AQ9NVS2 196 aaKnown RBP5.09□□□□□ -1.59
HMGB1P4-201ENST00000455362 FAM53CQ9NYF3 392 aa5.09□□□□□ -1.59
HMGB1P4-201ENST00000455362 NCDNQ9UBB6 729 aa5.09□□□□□ -1.59
HMGB1P4-201ENST00000455362 LHX3Q9UBR4 397 aa5.09□□□□□ -1.59
HMGB1P4-201ENST00000455362 DNAJB9Q9UBS3 223 aa5.09□□□□□ -1.59
HMGB1P4-201ENST00000455362 CD207Q9UJ71 328 aa5.09□□□□□ -1.59
HMGB1P4-201ENST00000455362 GGA2Q9UJY4 613 aa5.09□□□□□ -1.59
HMGB1P4-201ENST00000455362 RCE1Q9Y256 329 aa5.09□□□□□ -1.59
HMGB1P4-201ENST00000455362 HS3ST2Q9Y278 367 aa5.09□□□□□ -1.59
HMGB1P4-201ENST00000455362 SLC27A6Q9Y2P4 619 aa5.09□□□□□ -1.59
HMGB1P4-201ENST00000455362 PTRH2Q9Y3E5 179 aaKnown RBP5.09□□□□□ -1.59
HMGB1P4-201ENST00000455362 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.09□□□□□ -1.59
HMGB1P4-201ENST00000455362 MYLKQ15746 1914 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 MBD3L5A6NJ08 208 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 FAM90A7PA6NKC0 464 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 FAM90A22PA8MWA6 464 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 FAM90A12PA8MX19 464 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 FAM90A23PA8MXZ1 464 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 ANHXE9PGG2 379 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 H3BQ06 376 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 AP3B1O00203 1094 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 INSIG1O15503 277 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 TXNL1O43396 289 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 ECI2O75521 394 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 ZNF821O75541 412 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 SPAG6O75602 509 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 JUNP05412 331 aaKnown RBP5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 SERPINF2P08697 491 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 ABHD2P08910 425 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 GSTA2P09210 222 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 SRCP12931 536 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 SELLP14151 372 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 POLR2EP19388 210 aaKnown RBP5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 CHRM3P20309 590 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 MGAT1P26572 445 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 CD6P30203 668 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 SSTR1P30872 391 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 SLC15A1P46059 708 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 CSNK1DP48730 415 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 STK19P49842 368 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 GZMKP49863 264 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 SERPINH1P50454 418 aaKnown RBP5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 LOXL3P58215 753 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 ERVFRD-1P60508 538 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 RHOAP61586 193 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 CRADDP78560 199 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 ECT2LQ008S8 904 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 SULT2A1Q06520 285 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 CDK18Q07002 472 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 SCN1BQ07699 218 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 ZNF844Q08AG5 666 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 MESP2Q0VG99 397 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 CDH17Q12864 832 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 TCF15Q12870 199 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 CBX3Q13185 183 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 SLC14A1Q13336 389 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 MSLNQ13421 630 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 SMAD4Q13485 552 aaKnown RBP5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 HTR4Q13639 388 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 RUNX3Q13761 415 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 UBXN2BQ14CS0 331 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 PCLAFQ15004 111 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 GEN1Q17RS7 908 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 MSMPQ1L6U9 139 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 PTCHD3Q3KNS1 767 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 TMEM196Q5HYL7 178 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 SIRPB2Q5JXA9 342 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 CERCAMQ5T4B2 595 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 GKAP1Q5VSY0 366 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 STEAP4Q687X5 459 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 NAPEPLDQ6IQ20 393 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 ZC3H14Q6PJT7 736 aaKnown RBP5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 RPTNQ6XPR3 784 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 CYS1Q717R9 158 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 MTSS1LQ765P7 747 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 MTERF4Q7Z6M4 381 aaKnown RBP5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 ANKRD13BQ86YJ7 626 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 TICAM1Q8IUC6 712 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 TUSC5Q8IXB3 177 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 SLC25A41Q8N5S1 370 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 DPP10Q8N608 796 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 FITM2Q8N6M3 262 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 DNAAF3Q8N9W5 541 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 TMEM116Q8NCL8 245 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 AGBL5Q8NDL9 886 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 ISG20Q96AZ6 181 aaKnown RBP5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 SLC7A6OSQ96CW6 309 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 RNFT2Q96EX2 444 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 STAMBPL1Q96FJ0 436 aa5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 RPL10LQ96L21 214 aaKnown RBP5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 XPO6Q96QU8 1125 aaKnown RBP5.08□□□□□ -1.6
HMGB1P4-201ENST00000455362 NUDCD1Q96RS6 583 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms