RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 WDR55Q9H6Y2 383 aaPredicted RBP10.57□□□□□ -0.72
SCN9A-205ENST00000454569 SEMA4GQ9NTN9 838 aa10.57□□□□□ -0.72
SCN9A-205ENST00000454569 HRASLS2Q9NWW9 162 aa10.57□□□□□ -0.72
SCN9A-205ENST00000454569 ACTR10Q9NZ32 417 aa10.57□□□□□ -0.72
SCN9A-205ENST00000454569 RAPGEFL1Q9UHV5 662 aa10.57□□□□□ -0.72
SCN9A-205ENST00000454569 PADI4Q9UM07 663 aa10.57□□□□□ -0.72
SCN9A-205ENST00000454569 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.57□□□□□ -0.72
SCN9A-205ENST00000454569 FEZF1A0PJY2 475 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 PIPSLA2A3N6 862 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 LCMT2O60294 686 aaKnown RBP10.56□□□□□ -0.72
SCN9A-205ENST00000454569 DFNA5O60443 496 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 SNX3O60493 162 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 CLDN9O95484 217 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 MLYCDO95822 493 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 OTCP00480 354 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 EBLN1P0CF75 366 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 C1GALT1C1LP0DN25 315 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 ALDH4A1P30038 563 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 HSD17B2P37059 387 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 AQP5P55064 265 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 GFERP55789 205 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 IRF8Q02556 426 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 PRDX1Q06830 199 aaKnown RBP10.56□□□□□ -0.72
SCN9A-205ENST00000454569 PCDH1Q08174 1060 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 SF1Q15637 639 aaKnown RBP10.56□□□□□ -0.72
SCN9A-205ENST00000454569 ZCCHC8Q6NZY4 707 aaKnown RBP10.56□□□□□ -0.72
SCN9A-205ENST00000454569 NXPE4Q6UWF7 544 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 TMPRSS9Q7Z410 1059 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 FAM129CQ86XR2 697 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 MYLK4Q86YV6 388 aaPredicted RBP10.56□□□□□ -0.72
SCN9A-205ENST00000454569 CLYBLQ8N0X4 340 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 OR2T11Q8NH01 316 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 C10orf82Q8WW14 230 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 CCDC74AQ96AQ1 378 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 SLC38A3Q99624 504 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 ABCG4Q9H172 646 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 ACTR8Q9H981 624 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 EML4Q9HC35 981 aaKnown RBP10.56□□□□□ -0.72
SCN9A-205ENST00000454569 DNAAF2Q9NVR5 837 aaKnown RBP10.56□□□□□ -0.72
SCN9A-205ENST00000454569 GEMIN8Q9NWZ8 242 aaKnown RBP10.56□□□□□ -0.72
SCN9A-205ENST00000454569 OR6C2Q9NZP2 312 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 TMEM9Q9P0T7 183 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 KCNE2Q9Y6J6 123 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 USH1CQ9Y6N9 552 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 CROCCQ5TZA2 2017 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 COL5A1P20908 1838 aaPredicted RBP10.56□□□□□ -0.72
SCN9A-205ENST00000454569 IGHV1OR21-1A0A087WYE8 117 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 GOLGA8QA0A0J9YX86 632 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 ATP6AP2A0A1C7CYW4 349 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 CPED1A4D0V7 1026 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 GSAPA4D1B5 854 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 GOLGA8OA6NCC3 632 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 OR5K3A6NET4 321 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 LILRA5A6NI73 299 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 RHPN2P1A8MT19 583 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 GOLGA8NF8WBI6 632 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 CLGNO14967 610 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 PIP5K1BO14986 540 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 HCRTR1O43613 425 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 SH3BP5O60239 455 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 ATP6AP2O75787 350 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 UBXN7O94888 489 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 STATHP02808 62 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 LINC00032P0C843 101 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 CD59P13987 128 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 HGFP14210 728 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 ALOX15P16050 662 aaPredicted RBP10.56□□□□□ -0.72
SCN9A-205ENST00000454569 GLB1P16278 677 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 GNAZP19086 355 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 GRIA3P42263 894 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 CASP2P42575 452 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 IDH3AP50213 366 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 PKNOX1P55347 436 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 SNRPNP63162 240 aaKnown RBP10.56□□□□□ -0.72
SCN9A-205ENST00000454569 CSNK1G2P78368 415 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 TUBB3Q13509 450 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 SLBPQ14493 270 aaKnown RBP eCLIP10.56□□□□□ -0.72
SCN9A-205ENST00000454569 ABRAXAS2Q15018 415 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 ZRSR2Q15696 482 aaKnown RBP10.56□□□□□ -0.72
SCN9A-205ENST00000454569 ZIC1Q15915 447 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 SGO1Q5FBB7 561 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 ATG9BQ674R7 924 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 FCRL6Q6DN72 434 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 EPGNQ6UW88 154 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 USP53Q70EK8 1073 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 VN1R5Q7Z5H4 357 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 CACNA2D3Q8IZS8 1091 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 OR4K1Q8NGD4 311 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 METTL6Q8TCB7 284 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 TWIST2Q8WVJ9 160 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 GRAMD1AQ96CP6 724 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 WDR34Q96EX3 536 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 FCRL4Q96PJ5 515 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 OR52B2Q96RD2 323 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 DPH7Q9BTV6 452 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 RAB11FIP5Q9BXF6 653 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 UCK1Q9HA47 277 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 GPRC5BQ9NZH0 403 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 TRPS1Q9UHF7 1281 aa10.56□□□□□ -0.72
SCN9A-205ENST00000454569 DYRK1BQ9Y463 629 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms