RNA–Protein interactions for RNA: ENST00000454555.2

LINC00343-203, long intergenic non-protein coding RNA 343, humanhuman

TSL 2 BASIC

Gene LINC00343, Length 1,765 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-203ENST00000454555 HTR1BP28222 390 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 ARL1P40616 181 aaPredicted RBP12.89□□□□□ -0.35
LINC00343-203ENST00000454555 HTR6P50406 440 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 ZXDAP98168 799 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 PON2Q15165 354 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 CTF1Q16619 201 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 RFTN2Q52LD8 501 aaPredicted RBP12.89□□□□□ -0.35
LINC00343-203ENST00000454555 INO80DQ53TQ3 878 aaPredicted RBP12.89□□□□□ -0.35
LINC00343-203ENST00000454555 SPESP1Q6UW49 350 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 SBSNQ6UWP8 590 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 ZNF852Q6ZMS4 543 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 NCCRP1Q6ZVX7 275 aaPredicted RBP12.89□□□□□ -0.35
LINC00343-203ENST00000454555 PRSS48Q7RTY5 328 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 PLPP6Q8IY26 295 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 PIANPQ8IYJ0 282 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 PGBD3Q8N328 593 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 OR10A6Q8NH74 314 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 FBXO30Q8TB52 745 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 PHF10Q8WUB8 498 aaKnown RBP12.89□□□□□ -0.35
LINC00343-203ENST00000454555 RORBQ92753 470 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 KCNH6Q9H252 994 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 PIF1Q9H611 641 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 KAT8Q9H7Z6 458 aaKnown RBP12.89□□□□□ -0.35
LINC00343-203ENST00000454555 RDH14Q9HBH5 336 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 DAPK2Q9UIK4 370 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 FKBPLQ9UIM3 349 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 FBXL21Q9UKT6 434 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 CA14Q9ULX7 337 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 PCDHGA4Q9Y5G9 962 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 RAI2Q9Y5P3 530 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 CORINQ9Y5Q5 1042 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 KIAA1549LQ6ZVL6 1849 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 KRBA1A5PL33 1030 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 J3QRK9 145 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 K7EQS6 105 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 WNT9AO14904 365 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 HS6ST1O60243 411 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 PRKD3O94806 890 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 CD160O95971 181 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 SRPRAP08240 638 aaKnown RBP12.89□□□□□ -0.35
LINC00343-203ENST00000454555 PRPS2P11908 318 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 PCNAP12004 261 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 DGKAP23743 735 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 ACVR2AP27037 513 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 OPRL1P41146 370 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 RPL38P63173 70 aaKnown RBP12.89□□□□□ -0.35
LINC00343-203ENST00000454555 ABHD18Q0P651 414 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 ABRAXAS2Q15018 415 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 MEP1AQ16819 746 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 FBXO43Q4G163 708 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 CAPN13Q6MZZ7 669 aaPredicted RBP12.89□□□□□ -0.35
LINC00343-203ENST00000454555 ENPP6Q6UWR7 440 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 DCP2Q8IU60 420 aaKnown RBP12.89□□□□□ -0.35
LINC00343-203ENST00000454555 LPCAT1Q8NF37 534 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 RHBDF1Q96CC6 855 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 FBXL8Q96CD0 374 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 PYURFQ96I23 114 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 RPL10LQ96L21 214 aaKnown RBP12.89□□□□□ -0.35
LINC00343-203ENST00000454555 ALPK1Q96QP1 1244 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 NELL2Q99435 816 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 APOL4Q9BPW4 351 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 CIPCQ9C0C6 399 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 SMURF2Q9HAU4 748 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 C1orf109Q9NX04 203 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 OPTCQ9UBM4 332 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 HS3ST2Q9Y278 367 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 MRPS17Q9Y2R5 130 aaKnown RBP12.89□□□□□ -0.35
LINC00343-203ENST00000454555 ANGPTL3Q9Y5C1 460 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 UNC80Q8N2C7 3258 aa12.89□□□□□ -0.35
LINC00343-203ENST00000454555 NPIPB8E9PQR5 432 aa12.88□□□□□ -0.35
LINC00343-203ENST00000454555 M0R3G1 203 aa12.88□□□□□ -0.35
LINC00343-203ENST00000454555 NPC1O15118 1278 aa12.88□□□□□ -0.35
LINC00343-203ENST00000454555 ULK1O75385 1050 aa12.88□□□□□ -0.35
LINC00343-203ENST00000454555 GJB3O75712 270 aa12.88□□□□□ -0.35
LINC00343-203ENST00000454555 CCNDBP1O95273 360 aa12.88□□□□□ -0.35
LINC00343-203ENST00000454555 ANGPTL1O95841 491 aa12.88□□□□□ -0.35
LINC00343-203ENST00000454555 MAPK1P28482 360 aa12.88□□□□□ -0.35
LINC00343-203ENST00000454555 PIGAP37287 484 aa12.88□□□□□ -0.35
LINC00343-203ENST00000454555 CTSOP43234 321 aaPredicted RBP12.88□□□□□ -0.35
LINC00343-203ENST00000454555 DGKQP52824 942 aa12.88□□□□□ -0.35
LINC00343-203ENST00000454555 GP2P55259 537 aaKnown RBP12.88□□□□□ -0.35
LINC00343-203ENST00000454555 ABRQ12979 859 aa12.88□□□□□ -0.35
LINC00343-203ENST00000454555 CDK5R2Q13319 367 aa12.88□□□□□ -0.35
LINC00343-203ENST00000454555 SPCS2Q15005 226 aa12.88□□□□□ -0.35
LINC00343-203ENST00000454555 IMPG1Q17R60 797 aa12.88□□□□□ -0.35
LINC00343-203ENST00000454555 CTU2Q2VPK5 515 aaKnown RBP12.88□□□□□ -0.35
LINC00343-203ENST00000454555 TTLL9Q3SXZ7 439 aa12.88□□□□□ -0.35
LINC00343-203ENST00000454555 FAM174BQ3ZCQ3 159 aa12.88□□□□□ -0.35
LINC00343-203ENST00000454555 FBXO48Q5FWF7 155 aa12.88□□□□□ -0.35
LINC00343-203ENST00000454555 SYT6Q5T7P8 510 aaPredicted RBP12.88□□□□□ -0.35
LINC00343-203ENST00000454555 METTL3Q86U44 580 aaKnown RBP12.88□□□□□ -0.35
LINC00343-203ENST00000454555 RBFAQ8N0V3 343 aa12.88□□□□□ -0.35
LINC00343-203ENST00000454555 ZNF687Q8N1G0 1237 aa12.88□□□□□ -0.35
LINC00343-203ENST00000454555 FAR1Q8WVX9 515 aa12.88□□□□□ -0.35
LINC00343-203ENST00000454555 IPCEF1Q8WWN9 437 aaPredicted RBP12.88□□□□□ -0.35
LINC00343-203ENST00000454555 EDAQ92838 391 aa12.88□□□□□ -0.35
LINC00343-203ENST00000454555 USP7Q93009 1102 aa12.88□□□□□ -0.35
LINC00343-203ENST00000454555 TAMM41Q96BW9 452 aa12.88□□□□□ -0.35
LINC00343-203ENST00000454555 FAM120BQ96EK7 910 aaKnown RBP12.88□□□□□ -0.35
LINC00343-203ENST00000454555 ITCHQ96J02 903 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms