RNA–Protein interactions for RNA: ENST00000453527.6

CTSB-204, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CTSB, Length 2,011 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-204ENST00000453527 AP3M1Q9Y2T2 418 aa17.14■□□□□ 0.33
CTSB-204ENST00000453527 TDRKHQ9Y2W6 561 aaKnown RBP17.14■□□□□ 0.33
CTSB-204ENST00000453527 MTCH2Q9Y6C9 303 aa17.14■□□□□ 0.33
CTSB-204ENST00000453527 PIAS3Q9Y6X2 628 aa17.14■□□□□ 0.33
CTSB-204ENST00000453527 EYSQ5T1H1 3165 aa17.14■□□□□ 0.33
CTSB-204ENST00000453527 TBC1D3DA0A087WVF3 549 aa17.13■□□□□ 0.33
CTSB-204ENST00000453527 TBC1D3IA0A087WXS9 549 aa17.13■□□□□ 0.33
CTSB-204ENST00000453527 TBC1D3EA0A087X179 549 aa17.13■□□□□ 0.33
CTSB-204ENST00000453527 TBC1D3KA0A087X1G2 549 aa17.13■□□□□ 0.33
CTSB-204ENST00000453527 PIPSLA2A3N6 862 aa17.13■□□□□ 0.33
CTSB-204ENST00000453527 TBC1D3FA6NER0 549 aaPredicted RBP17.13■□□□□ 0.33
CTSB-204ENST00000453527 EIF4E1BA6NMX2 242 aaKnown RBP17.13■□□□□ 0.33
CTSB-204ENST00000453527 TBC1D3LB9A6J9 549 aa17.13■□□□□ 0.33
CTSB-204ENST00000453527 AKAP10O43572 662 aa17.13■□□□□ 0.33
CTSB-204ENST00000453527 TBC1D3HP0C7X1 549 aa17.13■□□□□ 0.33
CTSB-204ENST00000453527 BMP2P12643 396 aa17.13■□□□□ 0.33
CTSB-204ENST00000453527 ZNF26P17031 533 aaPredicted RBP17.13■□□□□ 0.33
CTSB-204ENST00000453527 DRD1P21728 446 aa17.13■□□□□ 0.33
CTSB-204ENST00000453527 KIR3DL1P43629 444 aa17.13■□□□□ 0.33
CTSB-204ENST00000453527 RPS13P62277 151 aaKnown RBP17.13■□□□□ 0.33
CTSB-204ENST00000453527 RAE1P78406 368 aaKnown RBP17.13■□□□□ 0.33
CTSB-204ENST00000453527 SRSF11Q05519 484 aaKnown RBP17.13■□□□□ 0.33
CTSB-204ENST00000453527 SPIN4Q56A73 249 aa17.13■□□□□ 0.33
CTSB-204ENST00000453527 PRAMEF14Q5SWL7 426 aa17.13■□□□□ 0.33
CTSB-204ENST00000453527 PRAMEF13Q5VWM6 474 aa17.13■□□□□ 0.33
CTSB-204ENST00000453527 TBC1D3GQ6DHY5 549 aa17.13■□□□□ 0.33
CTSB-204ENST00000453527 TBC1D3CQ6IPX1 549 aa17.13■□□□□ 0.33
CTSB-204ENST00000453527 AMIGO2Q86SJ2 522 aa17.13■□□□□ 0.33
CTSB-204ENST00000453527 HORMAD1Q86X24 394 aa17.13■□□□□ 0.33
CTSB-204ENST00000453527 TBC1D3Q8IZP1 549 aaPredicted RBP17.13■□□□□ 0.33
CTSB-204ENST00000453527 C1orf52Q8N6N3 182 aaKnown RBP17.13■□□□□ 0.33
CTSB-204ENST00000453527 CCDC115Q96NT0 180 aa17.13■□□□□ 0.33
CTSB-204ENST00000453527 HAUS8Q9BT25 410 aa17.13■□□□□ 0.33
CTSB-204ENST00000453527 RMI1Q9H9A7 625 aa17.13■□□□□ 0.33
CTSB-204ENST00000453527 SLC6A13Q9NSD5 602 aa17.13■□□□□ 0.33
CTSB-204ENST00000453527 SLC17A4Q9Y2C5 497 aa17.13■□□□□ 0.33
CTSB-204ENST00000453527 CFAP20Q9Y6A4 193 aaKnown RBP17.13■□□□□ 0.33
CTSB-204ENST00000453527 SLC35G4P0C7Q5 338 aa17.13■□□□□ 0.33
CTSB-204ENST00000453527 HOXB9P17482 250 aaPredicted RBP17.13■□□□□ 0.33
CTSB-204ENST00000453527 GGT1P19440 569 aa17.13■□□□□ 0.33
CTSB-204ENST00000453527 RPL10P27635 214 aaKnown RBP17.13■□□□□ 0.33
CTSB-204ENST00000453527 PTPN6P29350 595 aa17.13■□□□□ 0.33
CTSB-204ENST00000453527 HSD17B2P37059 387 aa17.13■□□□□ 0.33
CTSB-204ENST00000453527 CLCNKAP51800 687 aa17.13■□□□□ 0.33
CTSB-204ENST00000453527 HNRNPFP52597 415 aaKnown RBP17.13■□□□□ 0.33
CTSB-204ENST00000453527 SF1Q15637 639 aaKnown RBP17.13■□□□□ 0.33
CTSB-204ENST00000453527 UGT8Q16880 541 aa17.13■□□□□ 0.33
CTSB-204ENST00000453527 GTDC1Q4AE62 458 aa17.13■□□□□ 0.33
CTSB-204ENST00000453527 MTX3Q5HYI7 312 aa17.13■□□□□ 0.33
CTSB-204ENST00000453527 CAPRIN2Q6IMN6 1127 aaKnown RBP17.13■□□□□ 0.33
CTSB-204ENST00000453527 ANKRD46Q86W74 232 aa17.13■□□□□ 0.33
CTSB-204ENST00000453527 DTWD1Q8N5C7 304 aa17.13■□□□□ 0.33
CTSB-204ENST00000453527 ANKFN1Q8N957 763 aa17.13■□□□□ 0.33
CTSB-204ENST00000453527 PAPD5Q8NDF8 572 aaKnown RBP17.13■□□□□ 0.33
CTSB-204ENST00000453527 OR2T12Q8NG77 320 aa17.13■□□□□ 0.33
CTSB-204ENST00000453527 OR10A6Q8NH74 314 aa17.13■□□□□ 0.33
CTSB-204ENST00000453527 BIRC7Q96CA5 298 aa17.13■□□□□ 0.33
CTSB-204ENST00000453527 INPP5KQ9BT40 448 aa17.13■□□□□ 0.33
CTSB-204ENST00000453527 TRIT1Q9H3H1 467 aaKnown RBP17.13■□□□□ 0.33
CTSB-204ENST00000453527 PREBQ9HCU5 417 aa17.13■□□□□ 0.33
CTSB-204ENST00000453527 FZD4Q9ULV1 537 aa17.13■□□□□ 0.33
CTSB-204ENST00000453527 BRWD1Q9NSI6 2320 aa17.12■□□□□ 0.33
CTSB-204ENST00000453527 MAGEA13PA6NCF6 341 aa17.12■□□□□ 0.33
CTSB-204ENST00000453527 H0YJX3 145 aa17.12■□□□□ 0.33
CTSB-204ENST00000453527 DENRO43583 198 aaKnown RBP17.12■□□□□ 0.33
CTSB-204ENST00000453527 CEACAM5P06731 702 aa17.12■□□□□ 0.33
CTSB-204ENST00000453527 IGFALSP35858 605 aa17.12■□□□□ 0.33
CTSB-204ENST00000453527 GRSF1Q12849 480 aaKnown RBP eCLIP17.12■□□□□ 0.33
CTSB-204ENST00000453527 OR4F3Q6IEY1 312 aa17.12■□□□□ 0.33
CTSB-204ENST00000453527 GALNT18Q6P9A2 607 aa17.12■□□□□ 0.33
CTSB-204ENST00000453527 TMEM132CQ8N3T6 1108 aa17.12■□□□□ 0.33
CTSB-204ENST00000453527 GALNT4Q8N4A0 578 aa17.12■□□□□ 0.33
CTSB-204ENST00000453527 TNIP2Q8NFZ5 429 aa17.12■□□□□ 0.33
CTSB-204ENST00000453527 OR7A2PQ8NGA2 310 aa17.12■□□□□ 0.33
CTSB-204ENST00000453527 OR8J2Q8NGG1 315 aa17.12■□□□□ 0.33
CTSB-204ENST00000453527 NSMCE2Q96MF7 247 aa17.12■□□□□ 0.33
CTSB-204ENST00000453527 GBP5Q96PP8 586 aa17.12■□□□□ 0.33
CTSB-204ENST00000453527 REXO4Q9GZR2 422 aaKnown RBP17.12■□□□□ 0.33
CTSB-204ENST00000453527 KAT8Q9H7Z6 458 aaKnown RBP17.12■□□□□ 0.33
CTSB-204ENST00000453527 COQ10BQ9H8M1 238 aa17.12■□□□□ 0.33
CTSB-204ENST00000453527 AGPAT4Q9NRZ5 378 aa17.12■□□□□ 0.33
CTSB-204ENST00000453527 ANAPC2Q9UJX6 822 aa17.12■□□□□ 0.33
CTSB-204ENST00000453527 RAB26Q9ULW5 256 aa17.12■□□□□ 0.33
CTSB-204ENST00000453527 INVSQ9Y283 1065 aa17.12■□□□□ 0.33
CTSB-204ENST00000453527 TSC22D4Q9Y3Q8 395 aa17.12■□□□□ 0.33
CTSB-204ENST00000453527 SH3BGRLO75368 114 aa17.11■□□□□ 0.33
CTSB-204ENST00000453527 ANXA4P09525 319 aaPredicted RBP17.11■□□□□ 0.33
CTSB-204ENST00000453527 ACP5P13686 325 aa17.11■□□□□ 0.33
CTSB-204ENST00000453527 FASP25445 335 aa17.11■□□□□ 0.33
CTSB-204ENST00000453527 MAT2AP31153 395 aaKnown RBP17.11■□□□□ 0.33
CTSB-204ENST00000453527 ASMTP46597 345 aa17.11■□□□□ 0.33
CTSB-204ENST00000453527 MRPS21P82921 87 aaKnown RBP17.11■□□□□ 0.33
CTSB-204ENST00000453527 CYP2A13Q16696 494 aa17.11■□□□□ 0.33
CTSB-204ENST00000453527 TBC1D21Q8IYX1 336 aa17.11■□□□□ 0.33
CTSB-204ENST00000453527 C2orf73Q8N5S3 287 aaPredicted RBP17.11■□□□□ 0.33
CTSB-204ENST00000453527 ZNF548Q8NEK5 533 aaPredicted RBP17.11■□□□□ 0.33
CTSB-204ENST00000453527 STARD8Q92502 1023 aa17.11■□□□□ 0.33
CTSB-204ENST00000453527 UBE2E3Q969T4 207 aa17.11■□□□□ 0.33
CTSB-204ENST00000453527 SIPA1Q96FS4 1042 aa17.11■□□□□ 0.33
CTSB-204ENST00000453527 TIMM29Q9BSF4 260 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms