RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 LRRC58Q96CX6 371 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 ATXN7L3BQ96GX2 97 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 AHCYL2Q96HN2 611 aaKnown RBP2.15□□□□□ -2.07
USP53-202ENST00000450251 OR4K3Q96R72 315 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 ACBD6Q9BR61 282 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 ASPNQ9BXN1 380 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 FTHL17Q9BXU8 183 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 GPR61Q9BZJ8 451 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP2.15□□□□□ -2.07
USP53-202ENST00000450251 SDCBP2Q9H190 292 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 CHRDQ9H2X0 955 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 NARFLQ9H6Q4 476 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 BCO1Q9HAY6 547 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 ABCB9Q9NP78 766 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 VSX1Q9NZR4 365 aaPredicted RBP2.15□□□□□ -2.07
USP53-202ENST00000450251 CDH10Q9Y6N8 788 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 V9GYS6 101 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 ASTN1O14525 1302 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 NALCNQ8IZF0 1738 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP2.15□□□□□ -2.07
USP53-202ENST00000450251 ZNF98A6NK75 572 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 ERVV-1B6SEH8 477 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 D6RAR5 112 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 NPIPA2E9PIF3 369 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 CA12O43570 354 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 SDC3O75056 442 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 RGS9O75916 674 aaPredicted RBP2.15□□□□□ -2.07
USP53-202ENST00000450251 AQP8O94778 261 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 FGRP09769 529 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 SUPT20HL2P0C7V6 817 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 ERVK-10P10266 1014 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 DDCP20711 480 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 FGF7P21781 194 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 CRHBPP24387 322 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 PTAFRP25105 342 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 AZGP1P25311 298 aaKnown RBP2.15□□□□□ -2.07
USP53-202ENST00000450251 MGAT1P26572 445 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 GTF2E2P29084 291 aaKnown RBP2.15□□□□□ -2.07
USP53-202ENST00000450251 S100GP29377 79 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 ADORA1P30542 326 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 CA5AP35218 305 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 NOS2P35228 1153 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 CLCNKBP51801 687 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 EMP3P54852 163 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 TAS2R31P59538 309 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 SPOCK1Q08629 439 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 SELENBP1Q13228 472 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 ZNF177Q13360 481 aaPredicted RBP2.15□□□□□ -2.07
USP53-202ENST00000450251 MAMLD1Q13495 774 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 SNTB1Q13884 538 aaKnown RBP2.15□□□□□ -2.07
USP53-202ENST00000450251 CSHL1Q14406 222 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 SHROOM1Q2M3G4 852 aaPredicted RBP2.15□□□□□ -2.07
USP53-202ENST00000450251 AP5B1Q2VPB7 878 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 C4orf46Q504U0 113 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 ZRANB3Q5FWF4 1079 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 TCEAL5Q5H9L2 206 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 FAM209BQ5JX69 171 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 ZNF691Q5VV52 312 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 STEAP3Q658P3 488 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 ATG9BQ674R7 924 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 SLFN13Q68D06 897 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 OR2T5Q6IEZ7 315 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 TRIM40Q6P9F5 258 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 SEZ6L2Q6UXD5 910 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 SCARA5Q6ZMJ2 495 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 C16orf86Q6ZW13 317 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 BRINP3Q76B58 766 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 SSX6Q7RTT6 188 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 NUP54Q7Z3B4 507 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 DPP9Q86TI2 863 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 DDX53Q86TM3 631 aaKnown RBP2.15□□□□□ -2.07
USP53-202ENST00000450251 ZDHHC21Q8IVQ6 265 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 TMEM192Q8IY95 271 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 CPNE9Q8IYJ1 553 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 DAW1Q8N136 415 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 NAT8LQ8N9F0 302 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 AGBL3Q8NEM8 1001 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 OR2T29Q8NH02 315 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 OR10A6Q8NH74 314 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 GPR151Q8TDV0 419 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 CPT1BQ92523 772 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 SHC3Q92529 594 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 CNOT9Q92600 299 aaKnown RBP2.15□□□□□ -2.07
USP53-202ENST00000450251 ALG3Q92685 438 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 RIT1Q92963 219 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 PTP4A1Q93096 173 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 C1GALT1C1Q96EU7 318 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 KAZALD1Q96I82 304 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 CPB2Q96IY4 423 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 HS6ST2Q96MM7 605 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 DHRS4Q9BTZ2 278 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 MECRQ9BV79 373 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 GSX2Q9BZM3 304 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 KCTD10Q9H3F6 313 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 GPATCH2Q9NW75 528 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 RBFOX1Q9NWB1 397 aaKnown RBP2.15□□□□□ -2.07
USP53-202ENST00000450251 NUDT4Q9NZJ9 180 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 GMPR2Q9P2T1 348 aaKnown RBP2.15□□□□□ -2.07
USP53-202ENST00000450251 MGAT4CQ9UBM8 478 aa2.15□□□□□ -2.07
USP53-202ENST00000450251 GULP1Q9UBP9 304 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms