RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 SNAPC3Q92966 411 aa12.05□□□□□ -0.48
UBE3B-204ENST00000449510 FRMD6Q96NE9 622 aa12.05□□□□□ -0.48
UBE3B-204ENST00000449510 ATOH8Q96SQ7 321 aa12.05□□□□□ -0.48
UBE3B-204ENST00000449510 CCM2Q9BSQ5 444 aa12.05□□□□□ -0.48
UBE3B-204ENST00000449510 TEX12Q9BXU0 123 aa12.05□□□□□ -0.48
UBE3B-204ENST00000449510 NUDT4Q9NZJ9 180 aa12.05□□□□□ -0.48
UBE3B-204ENST00000449510 PADI3Q9ULW8 664 aa12.05□□□□□ -0.48
UBE3B-204ENST00000449510 TARM1B6A8C7 271 aa12.05□□□□□ -0.48
UBE3B-204ENST00000449510 SMLR1H3BR10 107 aa12.05□□□□□ -0.48
UBE3B-204ENST00000449510 WWP2O00308 870 aa12.05□□□□□ -0.48
UBE3B-204ENST00000449510 PTGESO14684 152 aa12.05□□□□□ -0.48
UBE3B-204ENST00000449510 TLX2O43763 284 aaPredicted RBP12.05□□□□□ -0.48
UBE3B-204ENST00000449510 CCNDBP1O95273 360 aa12.05□□□□□ -0.48
UBE3B-204ENST00000449510 CLDN7O95471 211 aa12.05□□□□□ -0.48
UBE3B-204ENST00000449510 CYP2A7P20853 494 aa12.05□□□□□ -0.48
UBE3B-204ENST00000449510 BUD31P41223 144 aaPredicted RBP12.05□□□□□ -0.48
UBE3B-204ENST00000449510 PTCHD3Q3KNS1 767 aa12.05□□□□□ -0.48
UBE3B-204ENST00000449510 KLHL12Q53G59 568 aa12.05□□□□□ -0.48
UBE3B-204ENST00000449510 AGAP7PQ5VUJ5 663 aa12.05□□□□□ -0.48
UBE3B-204ENST00000449510 DDX53Q86TM3 631 aaKnown RBP12.05□□□□□ -0.48
UBE3B-204ENST00000449510 FAM9CQ8IZT9 166 aa12.05□□□□□ -0.48
UBE3B-204ENST00000449510 ZBTB2Q8N680 514 aa12.05□□□□□ -0.48
UBE3B-204ENST00000449510 SLC5A8Q8N695 610 aa12.05□□□□□ -0.48
UBE3B-204ENST00000449510 TCEANCQ8N8B7 351 aa12.05□□□□□ -0.48
UBE3B-204ENST00000449510 HJURPQ8NCD3 748 aaPredicted RBP12.05□□□□□ -0.48
UBE3B-204ENST00000449510 BTN2A2Q8WVV5 523 aa12.05□□□□□ -0.48
UBE3B-204ENST00000449510 TANKQ92844 425 aa12.05□□□□□ -0.48
UBE3B-204ENST00000449510 KCNH4Q9UQ05 1017 aa12.05□□□□□ -0.48
UBE3B-204ENST00000449510 USP54Q70EL1 1684 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 FADS2P1A8MWK0 482 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 ERAL1O75616 437 aaKnown RBP12.04□□□□□ -0.48
UBE3B-204ENST00000449510 SLITRK5O94991 958 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 IFNA14P01570 189 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 C7P10643 843 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 SLC2A2P11168 524 aaPredicted RBP12.04□□□□□ -0.48
UBE3B-204ENST00000449510 SPNP16150 400 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 OGNP20774 298 aaKnown RBP12.04□□□□□ -0.48
UBE3B-204ENST00000449510 TACR1P25103 407 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 RORCP51449 518 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 CAV3P56539 151 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 IL10RBQ08334 325 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 C2orf80Q0P641 193 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 TARDBPQ13148 414 aaKnown RBP eCLIP12.04□□□□□ -0.48
UBE3B-204ENST00000449510 ACOX1Q15067 660 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 CARD16Q5EG05 197 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 C22orf42Q6IC83 251 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 TAPT1Q6NXT6 567 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 USP45Q70EL2 814 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 GPR142Q7Z601 462 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 SMG7Q92540 1137 aaKnown RBP12.04□□□□□ -0.48
UBE3B-204ENST00000449510 MUL1Q969V5 352 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 TSGA13Q96PP4 275 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 NEDD4LQ96PU5 975 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 DUSP26Q9BV47 211 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 TRPM5Q9NZQ8 1165 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 N6AMT1Q9Y5N5 214 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 ANKRD66B4E2M5 251 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 PLK4O00444 970 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 AP3D1O14617 1153 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 CXCL11O14625 94 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 TGFB1P01137 390 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 ESR1P03372 595 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 FGF4P08620 206 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 OR56A5P0C7T3 313 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 MTHFD2P13995 350 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 CSTF1Q05048 431 aaKnown RBP12.04□□□□□ -0.48
UBE3B-204ENST00000449510 CNTN1Q12860 1018 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 BHLHB9Q6PI77 547 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 SHFQ7M4L6 423 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 LAPTM4BQ86VI4 370 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 LYSMD2Q8IV50 215 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 ALDH16A1Q8IZ83 802 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 COL26A1Q96A83 441 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 ACBD6Q9BR61 282 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 CPNE5Q9HCH3 593 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 CDH7Q9ULB5 785 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 CPSF4LA6NMK7 179 aaKnown RBP12.04□□□□□ -0.48
UBE3B-204ENST00000449510 MANBAO00462 879 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 STATHP02808 62 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 NUDT7P0C024 238 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 TUBA1BP68363 451 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 ABHD18Q0P651 414 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 DPY19L3Q6ZPD9 716 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 TUBA1AQ71U36 451 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 HDDC2Q7Z4H3 204 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 IPCEF1Q8WWN9 437 aaPredicted RBP12.04□□□□□ -0.48
UBE3B-204ENST00000449510 YIPF4Q9BSR8 244 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 ZSCAN5AQ9BUG6 496 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 TMED9Q9BVK6 235 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 SLC22A4Q9H015 551 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 MCUBQ9NWR8 336 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 DLGAP4Q9Y2H0 992 aa12.04□□□□□ -0.48
UBE3B-204ENST00000449510 GLYATL1P3A0A0U1RQE8 302 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 ADAMDEC1O15204 470 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 OR2B3O76000 313 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 CCNB2O95067 398 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 FAM163BP0C2L3 166 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 PTGS2P35354 604 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 PTGER3P43115 390 aa12.03□□□□□ -0.48
UBE3B-204ENST00000449510 TGM4P49221 684 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms