RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 RFWD2Q8NHY2 731 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 IFI44Q8TCB0 444 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 NAT6Q93015 286 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 TGM7Q96PF1 710 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 EFCAB11Q9BUY7 163 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 NUF2Q9BZD4 464 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 EHD1Q9H4M9 534 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 ELOVL6Q9H5J4 265 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 PELI2Q9HAT8 420 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 EVA1BQ9NVM1 165 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 GEMIN8Q9NWZ8 242 aaKnown RBP14.07□□□□□ -0.16
TNF-208ENST00000449264 FTSJ1Q9UET6 329 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 KLHL3Q9UH77 587 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 POMT2Q9UKY4 750 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 DNAJC15Q9Y5T4 150 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 PTGDR2Q9Y5Y4 395 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 MDC1Q14676 2089 aaKnown RBP14.07□□□□□ -0.16
TNF-208ENST00000449264 ZNF292O60281 2723 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 KCNE1BA0A087WTH5 132 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 A0A0J9YY10 115 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 HDAC3O15379 428 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 CAPN5O15484 640 aaPredicted RBP14.07□□□□□ -0.16
TNF-208ENST00000449264 B4GAT1O43505 415 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 TGDSO95455 350 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 FGF4P08620 206 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 PCNAP12004 261 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 CKMT1AP12532 417 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 PVRP15151 417 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 CDH3P22223 829 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 HNF4AP41235 474 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 DDX39BQ13838 428 aaKnown RBP14.07□□□□□ -0.16
TNF-208ENST00000449264 NR1D2Q14995 579 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 TBCCQ15814 346 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 SLC5A12Q1EHB4 618 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 VWA5B1Q5TIE3 1220 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 SCIMPQ6UWF3 145 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 MAVSQ7Z434 540 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 PLD3Q8IV08 490 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 NAXDQ8IW45 347 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 ZNF740Q8NDX6 193 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 MTFMTQ96DP5 389 aaKnown RBP14.07□□□□□ -0.16
TNF-208ENST00000449264 FAR2Q96K12 515 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 MAGEB10Q96LZ2 347 aaPredicted RBP14.07□□□□□ -0.16
TNF-208ENST00000449264 AIF1LQ9BQI0 150 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 CCDC3Q9BQI4 270 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 SLC29A3Q9BZD2 475 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 TWSG1Q9GZX9 223 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 ABCG4Q9H172 646 aa14.07□□□□□ -0.16
TNF-208ENST00000449264 COL5A1P20908 1838 aaPredicted RBP14.07□□□□□ -0.16
TNF-208ENST00000449264 FEZF1A0PJY2 475 aa14.06□□□□□ -0.16
TNF-208ENST00000449264 SLCO1B7G3V0H7 640 aa14.06□□□□□ -0.16
TNF-208ENST00000449264 PIP5K1BO14986 540 aa14.06□□□□□ -0.16
TNF-208ENST00000449264 ZW10O43264 779 aa14.06□□□□□ -0.16
TNF-208ENST00000449264 SH3BP5O60239 455 aa14.06□□□□□ -0.16
TNF-208ENST00000449264 GDF9O60383 454 aa14.06□□□□□ -0.16
TNF-208ENST00000449264 DIAPH2O60879 1101 aa14.06□□□□□ -0.16
TNF-208ENST00000449264 LDOC1O95751 146 aaPredicted RBP14.06□□□□□ -0.16
TNF-208ENST00000449264 FAM107AO95990 144 aa14.06□□□□□ -0.16
TNF-208ENST00000449264 CD59P13987 128 aa14.06□□□□□ -0.16
TNF-208ENST00000449264 CSF2RBP32927 897 aa14.06□□□□□ -0.16
TNF-208ENST00000449264 GRIA3P42263 894 aa14.06□□□□□ -0.16
TNF-208ENST00000449264 CASP2P42575 452 aa14.06□□□□□ -0.16
TNF-208ENST00000449264 LSSP48449 732 aa14.06□□□□□ -0.16
TNF-208ENST00000449264 DUSP3P51452 185 aaPredicted RBP14.06□□□□□ -0.16
TNF-208ENST00000449264 CSNK1G2P78368 415 aa14.06□□□□□ -0.16
TNF-208ENST00000449264 GPLD1P80108 840 aa14.06□□□□□ -0.16
TNF-208ENST00000449264 REEP5Q00765 189 aa14.06□□□□□ -0.16
TNF-208ENST00000449264 BTKQ06187 659 aa14.06□□□□□ -0.16
TNF-208ENST00000449264 IFT88Q13099 833 aa14.06□□□□□ -0.16
TNF-208ENST00000449264 SLC14A1Q13336 389 aa14.06□□□□□ -0.16
TNF-208ENST00000449264 HIST2H2ACQ16777 129 aaPredicted RBP14.06□□□□□ -0.16
TNF-208ENST00000449264 HIST2H2AA3Q6FI13 130 aa14.06□□□□□ -0.16
TNF-208ENST00000449264 ADNP2Q6IQ32 1131 aa14.06□□□□□ -0.16
TNF-208ENST00000449264 MED27Q6P2C8 311 aa14.06□□□□□ -0.16
TNF-208ENST00000449264 DBX2Q6ZNG2 339 aa14.06□□□□□ -0.16
TNF-208ENST00000449264 USP53Q70EK8 1073 aa14.06□□□□□ -0.16
TNF-208ENST00000449264 SPATA21Q7Z572 469 aa14.06□□□□□ -0.16
TNF-208ENST00000449264 FAM129CQ86XR2 697 aa14.06□□□□□ -0.16
TNF-208ENST00000449264 KRT78Q8N1N4 520 aa14.06□□□□□ -0.16
TNF-208ENST00000449264 ABHD11Q8NFV4 315 aa14.06□□□□□ -0.16
TNF-208ENST00000449264 BCAS4Q8TDM0 211 aa14.06□□□□□ -0.16
TNF-208ENST00000449264 WDR34Q96EX3 536 aa14.06□□□□□ -0.16
TNF-208ENST00000449264 PHOX2BQ99453 314 aa14.06□□□□□ -0.16
TNF-208ENST00000449264 EPB41L1Q9H4G0 881 aa14.06□□□□□ -0.16
TNF-208ENST00000449264 FARSBQ9NSD9 589 aaKnown RBP14.06□□□□□ -0.16
TNF-208ENST00000449264 VTI1BQ9UEU0 232 aa14.06□□□□□ -0.16
TNF-208ENST00000449264 SNX6Q9UNH7 406 aa14.06□□□□□ -0.16
TNF-208ENST00000449264 MANBAO00462 879 aa14.05□□□□□ -0.16
TNF-208ENST00000449264 NDUFAB1O14561 156 aa14.05□□□□□ -0.16
TNF-208ENST00000449264 HAT1O14929 419 aa14.05□□□□□ -0.16
TNF-208ENST00000449264 KRT6AP02538 564 aa14.05□□□□□ -0.16
TNF-208ENST00000449264 KRT6BP04259 564 aa14.05□□□□□ -0.16
TNF-208ENST00000449264 RPLP0P05388 317 aaKnown RBP14.05□□□□□ -0.16
TNF-208ENST00000449264 HOXB3P14651 431 aaPredicted RBP14.05□□□□□ -0.16
TNF-208ENST00000449264 PNLIPP16233 465 aa14.05□□□□□ -0.16
TNF-208ENST00000449264 TGM1P22735 817 aa14.05□□□□□ -0.16
TNF-208ENST00000449264 GRK3P35626 688 aa14.05□□□□□ -0.16
TNF-208ENST00000449264 KRT6CP48668 564 aa14.05□□□□□ -0.16
TNF-208ENST00000449264 NEK2P51955 445 aa14.05□□□□□ -0.16
TNF-208ENST00000449264 HK2P52789 917 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms