RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 ISM1B1AKI9 464 aa18.54■□□□□ 0.56
RPS28-202ENST00000449223 NPIPB8E9PQR5 432 aa18.54■□□□□ 0.56
RPS28-202ENST00000449223 MANBAO00462 879 aa18.54■□□□□ 0.56
RPS28-202ENST00000449223 PIP5K1BO14986 540 aa18.54■□□□□ 0.56
RPS28-202ENST00000449223 ULK1O75385 1050 aa18.54■□□□□ 0.56
RPS28-202ENST00000449223 SKAP2O75563 359 aaPredicted RBP18.54■□□□□ 0.56
RPS28-202ENST00000449223 POLR2CP19387 275 aaPredicted RBP18.54■□□□□ 0.56
RPS28-202ENST00000449223 VARSP26640 1264 aaKnown RBP18.54■□□□□ 0.56
RPS28-202ENST00000449223 REEP5Q00765 189 aa18.54■□□□□ 0.56
RPS28-202ENST00000449223 TUBB3Q13509 450 aa18.54■□□□□ 0.56
RPS28-202ENST00000449223 SF1Q15637 639 aaKnown RBP18.54■□□□□ 0.56
RPS28-202ENST00000449223 SLC9B1Q4ZJI4 515 aa18.54■□□□□ 0.56
RPS28-202ENST00000449223 TCHHL1Q5QJ38 904 aaPredicted RBP18.54■□□□□ 0.56
RPS28-202ENST00000449223 SPESP1Q6UW49 350 aa18.54■□□□□ 0.56
RPS28-202ENST00000449223 ZNF761Q86XN6 746 aaPredicted RBP18.54■□□□□ 0.56
RPS28-202ENST00000449223 MYLK4Q86YV6 388 aaPredicted RBP18.54■□□□□ 0.56
RPS28-202ENST00000449223 CACNA2D3Q8IZS8 1091 aa18.54■□□□□ 0.56
RPS28-202ENST00000449223 RSC1A1Q92681 617 aa18.54■□□□□ 0.56
RPS28-202ENST00000449223 REPS1Q96D71 796 aa18.54■□□□□ 0.56
RPS28-202ENST00000449223 APOLD1Q96LR9 279 aa18.54■□□□□ 0.56
RPS28-202ENST00000449223 CCDC28BQ9BUN5 200 aa18.54■□□□□ 0.56
RPS28-202ENST00000449223 GTPBP2Q9BX10 602 aaKnown RBP18.54■□□□□ 0.56
RPS28-202ENST00000449223 SLC6A20Q9NP91 592 aa18.54■□□□□ 0.56
RPS28-202ENST00000449223 POMT2Q9UKY4 750 aa18.54■□□□□ 0.56
RPS28-202ENST00000449223 PADI4Q9UM07 663 aa18.54■□□□□ 0.56
RPS28-202ENST00000449223 CCL27Q9Y4X3 112 aa18.54■□□□□ 0.56
RPS28-202ENST00000449223 MUC6Q6W4X9 2439 aa18.53■□□□□ 0.56
RPS28-202ENST00000449223 SIGLEC6O43699 453 aa18.53■□□□□ 0.56
RPS28-202ENST00000449223 VPS4BO75351 444 aa18.53■□□□□ 0.56
RPS28-202ENST00000449223 PROS1P07225 676 aa18.53■□□□□ 0.56
RPS28-202ENST00000449223 HTR6P50406 440 aa18.53■□□□□ 0.56
RPS28-202ENST00000449223 ATXN3P54252 364 aaPredicted RBP18.53■□□□□ 0.56
RPS28-202ENST00000449223 CSNK1G2P78368 415 aa18.53■□□□□ 0.56
RPS28-202ENST00000449223 GPLD1P80108 840 aa18.53■□□□□ 0.56
RPS28-202ENST00000449223 RELAQ04206 551 aa18.53■□□□□ 0.56
RPS28-202ENST00000449223 BIRC2Q13490 618 aa18.53■□□□□ 0.56
RPS28-202ENST00000449223 SLBPQ14493 270 aaKnown RBP eCLIP18.53■□□□□ 0.56
RPS28-202ENST00000449223 ABRAXAS2Q15018 415 aa18.53■□□□□ 0.56
RPS28-202ENST00000449223 FAM219BQ5XKK7 198 aa18.53■□□□□ 0.56
RPS28-202ENST00000449223 MED27Q6P2C8 311 aa18.53■□□□□ 0.56
RPS28-202ENST00000449223 KRT78Q8N1N4 520 aa18.53■□□□□ 0.56
RPS28-202ENST00000449223 OR7G3Q8NG95 312 aa18.53■□□□□ 0.56
RPS28-202ENST00000449223 AIF1LQ9BQI0 150 aa18.53■□□□□ 0.56
RPS28-202ENST00000449223 ELOVL6Q9H5J4 265 aa18.53■□□□□ 0.56
RPS28-202ENST00000449223 ZNF490Q9ULM2 529 aaPredicted RBP18.53■□□□□ 0.56
RPS28-202ENST00000449223 EME2A4GXA9 379 aaPredicted RBP18.52■□□□□ 0.56
RPS28-202ENST00000449223 H7BY64 318 aa18.52■□□□□ 0.56
RPS28-202ENST00000449223 FFAR3O14843 346 aa18.52■□□□□ 0.56
RPS28-202ENST00000449223 GPR42O15529 346 aa18.52■□□□□ 0.56
RPS28-202ENST00000449223 DIAPH2O60879 1101 aa18.52■□□□□ 0.56
RPS28-202ENST00000449223 PRR35P0CG20 571 aa18.52■□□□□ 0.56
RPS28-202ENST00000449223 HSD3B1P14060 373 aa18.52■□□□□ 0.56
RPS28-202ENST00000449223 HSD3B2P26439 372 aa18.52■□□□□ 0.56
RPS28-202ENST00000449223 GSTM2P28161 218 aa18.52■□□□□ 0.56
RPS28-202ENST00000449223 EPHA3P29320 983 aa18.52■□□□□ 0.56
RPS28-202ENST00000449223 IFT88Q13099 833 aa18.52■□□□□ 0.56
RPS28-202ENST00000449223 SLC14A1Q13336 389 aa18.52■□□□□ 0.56
RPS28-202ENST00000449223 SUZ12Q15022 739 aaKnown RBP18.52■□□□□ 0.56
RPS28-202ENST00000449223 NR0B2Q15466 257 aa18.52■□□□□ 0.56
RPS28-202ENST00000449223 HIST2H2ACQ16777 129 aaPredicted RBP18.52■□□□□ 0.56
RPS28-202ENST00000449223 PROX2Q3B8N5 592 aa18.52■□□□□ 0.56
RPS28-202ENST00000449223 KIAA1614Q5VZ46 1190 aa18.52■□□□□ 0.56
RPS28-202ENST00000449223 METTL21CQ5VZV1 264 aa18.52■□□□□ 0.56
RPS28-202ENST00000449223 HIST2H2AA3Q6FI13 130 aa18.52■□□□□ 0.56
RPS28-202ENST00000449223 TMIGD1Q6UXZ0 262 aa18.52■□□□□ 0.56
RPS28-202ENST00000449223 LARP4Q71RC2 724 aaKnown RBP eCLIP18.52■□□□□ 0.565e-9■■□□□ 12.7
RPS28-202ENST00000449223 OR10G6Q8NH81 332 aa18.52■□□□□ 0.56
RPS28-202ENST00000449223 PRR11Q96HE9 360 aaPredicted RBP18.52■□□□□ 0.56
RPS28-202ENST00000449223 C3orf30Q96M34 536 aa18.52■□□□□ 0.56
RPS28-202ENST00000449223 PRAP1Q96NZ9 151 aa18.52■□□□□ 0.56
RPS28-202ENST00000449223 SPNS1Q9H2V7 528 aa18.52■□□□□ 0.56
RPS28-202ENST00000449223 RHBGQ9H310 441 aa18.52■□□□□ 0.56
RPS28-202ENST00000449223 BRF2Q9HAW0 419 aa18.52■□□□□ 0.56
RPS28-202ENST00000449223 TCF7L2Q9NQB0 619 aa18.52■□□□□ 0.56
RPS28-202ENST00000449223 SNX7Q9UNH6 387 aa18.52■□□□□ 0.56
RPS28-202ENST00000449223 IGHV1OR21-1A0A087WYE8 117 aa18.51■□□□□ 0.55
RPS28-202ENST00000449223 A0A0J9YY10 115 aa18.51■□□□□ 0.55
RPS28-202ENST00000449223 GSAPA4D1B5 854 aa18.51■□□□□ 0.55
RPS28-202ENST00000449223 OR2A25A4D2G3 310 aa18.51■□□□□ 0.55
RPS28-202ENST00000449223 FOXE1O00358 373 aaPredicted RBP18.51■□□□□ 0.55
RPS28-202ENST00000449223 PRPH2P23942 346 aa18.51■□□□□ 0.55
RPS28-202ENST00000449223 SERPINB1P30740 379 aa18.51■□□□□ 0.55
RPS28-202ENST00000449223 GRIA3P42263 894 aa18.51■□□□□ 0.55
RPS28-202ENST00000449223 PIK3CBP42338 1070 aa18.51■□□□□ 0.55
RPS28-202ENST00000449223 CSTF3Q12996 717 aaKnown RBP18.51■□□□□ 0.55
RPS28-202ENST00000449223 SQSTM1Q13501 440 aa18.51■□□□□ 0.55
RPS28-202ENST00000449223 Q6ZSR9 355 aa18.51■□□□□ 0.55
RPS28-202ENST00000449223 ACAD11Q709F0 780 aa18.51■□□□□ 0.55
RPS28-202ENST00000449223 DDIASQ8IXT1 998 aa18.51■□□□□ 0.55
RPS28-202ENST00000449223 CARFQ8N187 725 aa18.51■□□□□ 0.55
RPS28-202ENST00000449223 GBP7Q8N8V2 638 aaPredicted RBP18.51■□□□□ 0.55
RPS28-202ENST00000449223 CEP70Q8NHQ1 597 aa18.51■□□□□ 0.55
RPS28-202ENST00000449223 SELENOMQ8WWX9 145 aa18.51■□□□□ 0.55
RPS28-202ENST00000449223 NAT6Q93015 286 aa18.51■□□□□ 0.55
RPS28-202ENST00000449223 ZUFSPQ96AP4 578 aa18.51■□□□□ 0.55
RPS28-202ENST00000449223 OR52B2Q96RD2 323 aa18.51■□□□□ 0.55
RPS28-202ENST00000449223 DPH7Q9BTV6 452 aa18.51■□□□□ 0.55
RPS28-202ENST00000449223 WDR55Q9H6Y2 383 aaPredicted RBP18.51■□□□□ 0.55
RPS28-202ENST00000449223 FARSBQ9NSD9 589 aaKnown RBP18.51■□□□□ 0.55
RPS28-202ENST00000449223 ADGRE2Q9UHX3 823 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms