RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 TRBV5-3A0A0A0MS03 114 aa17.08■□□□□ 0.32
LMNA-208ENST00000448611 FOXE1O00358 373 aaPredicted RBP17.08■□□□□ 0.32
LMNA-208ENST00000448611 PRPS1L1P21108 318 aa17.08■□□□□ 0.32
LMNA-208ENST00000448611 S100A3P33764 101 aa17.08■□□□□ 0.32
LMNA-208ENST00000448611 RPS13P62277 151 aaKnown RBP17.08■□□□□ 0.32
LMNA-208ENST00000448611 RAE1P78406 368 aaKnown RBP17.08■□□□□ 0.32
LMNA-208ENST00000448611 ACSM2AQ08AH3 577 aa17.08■□□□□ 0.32
LMNA-208ENST00000448611 CYP2A13Q16696 494 aa17.08■□□□□ 0.32
LMNA-208ENST00000448611 THEMIS2Q5TEJ8 643 aa17.08■□□□□ 0.32
LMNA-208ENST00000448611 ACSM2BQ68CK6 577 aa17.08■□□□□ 0.32
LMNA-208ENST00000448611 DUS1LQ6P1R4 473 aaKnown RBP17.08■□□□□ 0.32
LMNA-208ENST00000448611 GOLM1Q8NBJ4 401 aa17.08■□□□□ 0.32
LMNA-208ENST00000448611 CHTF18Q8WVB6 975 aa17.08■□□□□ 0.32
LMNA-208ENST00000448611 CANT1Q8WVQ1 401 aa17.08■□□□□ 0.32
LMNA-208ENST00000448611 MYOCQ99972 504 aa17.08■□□□□ 0.32
LMNA-208ENST00000448611 SUFUQ9UMX1 484 aa17.08■□□□□ 0.32
LMNA-208ENST00000448611 USP22Q9UPT9 525 aa17.08■□□□□ 0.32
LMNA-208ENST00000448611 ZNF839A8K0R7 811 aa17.07■□□□□ 0.32
LMNA-208ENST00000448611 CACNB4O00305 520 aaPredicted RBP17.07■□□□□ 0.32
LMNA-208ENST00000448611 LATO43561 262 aa17.07■□□□□ 0.32
LMNA-208ENST00000448611 NARSO43776 548 aaKnown RBP17.07■□□□□ 0.32
LMNA-208ENST00000448611 PRMT3O60678 531 aa17.07■□□□□ 0.32
LMNA-208ENST00000448611 LRATO95237 230 aa17.07■□□□□ 0.32
LMNA-208ENST00000448611 ACADMP11310 421 aa17.07■□□□□ 0.32
LMNA-208ENST00000448611 GLULP15104 373 aa17.07■□□□□ 0.32
LMNA-208ENST00000448611 HSD17B2P37059 387 aa17.07■□□□□ 0.32
LMNA-208ENST00000448611 C21orf58P58505 322 aa17.07■□□□□ 0.32
LMNA-208ENST00000448611 MTAPQ13126 283 aa17.07■□□□□ 0.32
LMNA-208ENST00000448611 LAPTM5Q13571 262 aa17.07■□□□□ 0.32
LMNA-208ENST00000448611 CCINQ13939 588 aa17.07■□□□□ 0.32
LMNA-208ENST00000448611 SF1Q15637 639 aaKnown RBP17.07■□□□□ 0.32
LMNA-208ENST00000448611 LEXMQ3ZCV2 418 aa17.07■□□□□ 0.32
LMNA-208ENST00000448611 FBXO43Q4G163 708 aa17.07■□□□□ 0.32
LMNA-208ENST00000448611 EOGTQ5NDL2 527 aa17.07■□□□□ 0.32
LMNA-208ENST00000448611 SYT12Q8IV01 421 aa17.07■□□□□ 0.32
LMNA-208ENST00000448611 C2orf73Q8N5S3 287 aaPredicted RBP17.07■□□□□ 0.32
LMNA-208ENST00000448611 C1orf52Q8N6N3 182 aaKnown RBP17.07■□□□□ 0.32
LMNA-208ENST00000448611 DNAJB8Q8NHS0 232 aa17.07■□□□□ 0.32
LMNA-208ENST00000448611 SCARF2Q96GP6 870 aaPredicted RBP17.07■□□□□ 0.32
LMNA-208ENST00000448611 INSM2Q96T92 566 aaPredicted RBP17.07■□□□□ 0.32
LMNA-208ENST00000448611 HAUS8Q9BT25 410 aa17.07■□□□□ 0.32
LMNA-208ENST00000448611 PAIP1Q9H074 479 aaKnown RBP17.07■□□□□ 0.32
LMNA-208ENST00000448611 KCNH6Q9H252 994 aa17.07■□□□□ 0.32
LMNA-208ENST00000448611 ARMC1Q9NVT9 282 aa17.07■□□□□ 0.32
LMNA-208ENST00000448611 SPATA7Q9P0W8 599 aa17.07■□□□□ 0.32
LMNA-208ENST00000448611 KCNK6Q9Y257 313 aa17.07■□□□□ 0.32
LMNA-208ENST00000448611 PLEKHM1Q9Y4G2 1056 aa17.07■□□□□ 0.32
LMNA-208ENST00000448611 KCNJ13O60928 360 aa17.06■□□□□ 0.32
LMNA-208ENST00000448611 ASGR2P07307 311 aa17.06■□□□□ 0.32
LMNA-208ENST00000448611 MTHFD1P11586 935 aaKnown RBP17.06■□□□□ 0.32
LMNA-208ENST00000448611 CDH1P12830 882 aa17.06■□□□□ 0.32
LMNA-208ENST00000448611 ACSL1P33121 698 aa17.06■□□□□ 0.32
LMNA-208ENST00000448611 OR4D2P58180 307 aa17.06■□□□□ 0.32
LMNA-208ENST00000448611 MEF2AQ02078 507 aaPredicted RBP17.06■□□□□ 0.32
LMNA-208ENST00000448611 HIST2H2ACQ16777 129 aaPredicted RBP17.06■□□□□ 0.32
LMNA-208ENST00000448611 RUNDC3AQ59EK9 446 aa17.06■□□□□ 0.32
LMNA-208ENST00000448611 LRIF1Q5T3J3 769 aa17.06■□□□□ 0.32
LMNA-208ENST00000448611 HIST2H2AA3Q6FI13 130 aa17.06■□□□□ 0.32
LMNA-208ENST00000448611 PTCRAQ6ISU1 281 aaPredicted RBP17.06■□□□□ 0.32
LMNA-208ENST00000448611 KIAA1324Q6UXG2 1013 aaKnown RBP17.06■□□□□ 0.32
LMNA-208ENST00000448611 TICAM1Q8IUC6 712 aa17.06■□□□□ 0.32
LMNA-208ENST00000448611 PLCD3Q8N3E9 789 aa17.06■□□□□ 0.32
LMNA-208ENST00000448611 GFM2Q969S9 779 aaKnown RBP17.06■□□□□ 0.32
LMNA-208ENST00000448611 OSGEPL1Q9H4B0 414 aa17.06■□□□□ 0.32
LMNA-208ENST00000448611 SLC6A13Q9NSD5 602 aa17.06■□□□□ 0.32
LMNA-208ENST00000448611 CCM2LQ9NUG4 571 aaPredicted RBP17.06■□□□□ 0.32
LMNA-208ENST00000448611 TSC22D4Q9Y3Q8 395 aa17.06■□□□□ 0.32
LMNA-208ENST00000448611 PCDHB3Q9Y5E6 796 aa17.06■□□□□ 0.32
LMNA-208ENST00000448611 A0A096LPI6 279 aa17.06■□□□□ 0.32
LMNA-208ENST00000448611 POM121BA6NF01 834 aa17.06■□□□□ 0.32
LMNA-208ENST00000448611 SH3BGRLO75368 114 aa17.06■□□□□ 0.32
LMNA-208ENST00000448611 ERN1O75460 977 aaKnown RBP17.06■□□□□ 0.32
LMNA-208ENST00000448611 MYO1DO94832 1006 aa17.06■□□□□ 0.32
LMNA-208ENST00000448611 HOXC4P09017 264 aaPredicted RBP17.06■□□□□ 0.32
LMNA-208ENST00000448611 HOXB9P17482 250 aaPredicted RBP17.06■□□□□ 0.32
LMNA-208ENST00000448611 HRH2P25021 359 aa17.06■□□□□ 0.32
LMNA-208ENST00000448611 AQP4P55087 323 aa17.06■□□□□ 0.32
LMNA-208ENST00000448611 MLF2Q15773 248 aaPredicted RBP17.06■□□□□ 0.32
LMNA-208ENST00000448611 UGT8Q16880 541 aa17.06■□□□□ 0.32
LMNA-208ENST00000448611 PGS1Q32NB8 556 aa17.06■□□□□ 0.32
LMNA-208ENST00000448611 GRAMD1BQ3KR37 738 aa17.06■□□□□ 0.32
LMNA-208ENST00000448611 GTDC1Q4AE62 458 aa17.06■□□□□ 0.32
LMNA-208ENST00000448611 SPIN4Q56A73 249 aa17.06■□□□□ 0.32
LMNA-208ENST00000448611 DNAJC14Q6Y2X3 702 aaPredicted RBP17.06■□□□□ 0.32
LMNA-208ENST00000448611 MSANTD1Q6ZTZ1 278 aa17.06■□□□□ 0.32
LMNA-208ENST00000448611 GPR180Q86V85 440 aa17.06■□□□□ 0.32
LMNA-208ENST00000448611 TRIM69Q86WT6 500 aa17.06■□□□□ 0.32
LMNA-208ENST00000448611 FAM129CQ86XR2 697 aa17.06■□□□□ 0.32
LMNA-208ENST00000448611 FAM3CQ92520 227 aa17.06■□□□□ 0.32
LMNA-208ENST00000448611 C12orf66Q96MD2 445 aa17.06■□□□□ 0.32
LMNA-208ENST00000448611 ZNF583Q96ND8 569 aa17.06■□□□□ 0.32
LMNA-208ENST00000448611 IKZF5Q9H5V7 419 aa17.06■□□□□ 0.32
LMNA-208ENST00000448611 PIF1Q9H611 641 aa17.06■□□□□ 0.32
LMNA-208ENST00000448611 RMND5AQ9H871 391 aa17.06■□□□□ 0.32
LMNA-208ENST00000448611 FGF22Q9HCT0 170 aa17.06■□□□□ 0.32
LMNA-208ENST00000448611 DMRT3Q9NQL9 472 aa17.06■□□□□ 0.32
LMNA-208ENST00000448611 MMP17Q9ULZ9 603 aa17.06■□□□□ 0.32
LMNA-208ENST00000448611 TCRBV5S2A0A599 114 aa17.05■□□□□ 0.32
LMNA-208ENST00000448611 DHRS12A0PJE2 317 aa17.05■□□□□ 0.32
LMNA-208ENST00000448611 AKAP10O43572 662 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms