RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 IMPA1P29218 277 aa18.77■□□□□ 0.6
VCP-203ENST00000448530 PAFAH1B1P43034 410 aa18.77■□□□□ 0.6
VCP-203ENST00000448530 MSS51Q4VC12 460 aa18.77■□□□□ 0.6
VCP-203ENST00000448530 GARNL3Q5VVW2 1013 aa18.77■□□□□ 0.6
VCP-203ENST00000448530 KIRREL2Q6UWL6 708 aa18.77■□□□□ 0.6
VCP-203ENST00000448530 FAM26EQ8N5C1 309 aa18.77■□□□□ 0.6
VCP-203ENST00000448530 EEF1AKMT1Q8WVE0 214 aa18.77■□□□□ 0.6
VCP-203ENST00000448530 CFAP36Q96G28 342 aa18.77■□□□□ 0.6
VCP-203ENST00000448530 CCDC138Q96M89 665 aa18.77■□□□□ 0.6
VCP-203ENST00000448530 SLC29A3Q9BZD2 475 aa18.77■□□□□ 0.6
VCP-203ENST00000448530 PCBD2Q9H0N5 130 aa18.77■□□□□ 0.6
VCP-203ENST00000448530 ZNF552Q9H707 407 aaPredicted RBP18.77■□□□□ 0.6
VCP-203ENST00000448530 TRPC4Q9UBN4 977 aa18.77■□□□□ 0.6
VCP-203ENST00000448530 RUVBL1Q9Y265 456 aaKnown RBP18.77■□□□□ 0.6
VCP-203ENST00000448530 B3GNT3Q9Y2A9 372 aa18.77■□□□□ 0.6
VCP-203ENST00000448530 DOPEY2Q9Y3R5 2298 aa18.77■□□□□ 0.6
VCP-203ENST00000448530 LRRK2Q5S007 2527 aa18.77■□□□□ 0.6
VCP-203ENST00000448530 SOCS6O14544 535 aa18.76■□□□□ 0.59
VCP-203ENST00000448530 HIST1H2AGP0C0S8 130 aaPredicted RBP18.76■□□□□ 0.59
VCP-203ENST00000448530 HIST1H2ADP20671 130 aa18.76■□□□□ 0.59
VCP-203ENST00000448530 KLC1Q07866 573 aa18.76■□□□□ 0.59
VCP-203ENST00000448530 SP140Q13342 867 aa18.76■□□□□ 0.59
VCP-203ENST00000448530 PDAP1Q13442 181 aaKnown RBP18.76■□□□□ 0.59
VCP-203ENST00000448530 HIF1AQ16665 826 aa18.76■□□□□ 0.59
VCP-203ENST00000448530 HKDC1Q2TB90 917 aa18.76■□□□□ 0.59
VCP-203ENST00000448530 HP1BP3Q5SSJ5 553 aaPredicted RBP18.76■□□□□ 0.59
VCP-203ENST00000448530 PAQR3Q6TCH7 311 aa18.76■□□□□ 0.59
VCP-203ENST00000448530 IGFL3Q6UXB1 125 aa18.76■□□□□ 0.59
VCP-203ENST00000448530 SPNS2Q8IVW8 549 aa18.76■□□□□ 0.59
VCP-203ENST00000448530 CNTN4Q8IWV2 1026 aa18.76■□□□□ 0.59
VCP-203ENST00000448530 IQCKQ8N0W5 287 aa18.76■□□□□ 0.59
VCP-203ENST00000448530 MMABQ96EY8 250 aaPredicted RBP18.76■□□□□ 0.59
VCP-203ENST00000448530 HIST1H2AHQ96KK5 128 aa18.76■□□□□ 0.59
VCP-203ENST00000448530 OR2A5Q96R48 311 aa18.76■□□□□ 0.59
VCP-203ENST00000448530 HIST1H2AJQ99878 128 aa18.76■□□□□ 0.59
VCP-203ENST00000448530 H2AFJQ9BTM1 129 aa18.76■□□□□ 0.59
VCP-203ENST00000448530 ILKAPQ9H0C8 392 aaPredicted RBP18.76■□□□□ 0.59
VCP-203ENST00000448530 PARVBQ9HBI1 364 aa18.76■□□□□ 0.59
VCP-203ENST00000448530 TMEM184CQ9NVA4 438 aa18.76■□□□□ 0.59
VCP-203ENST00000448530 C3orf18Q9UK00 162 aa18.76■□□□□ 0.59
VCP-203ENST00000448530 CHMP2BQ9UQN3 213 aa18.76■□□□□ 0.59
VCP-203ENST00000448530 H7BY64 318 aa18.75■□□□□ 0.59
VCP-203ENST00000448530 MAP2K7O14733 419 aa18.75■□□□□ 0.59
VCP-203ENST00000448530 HAT1O14929 419 aa18.75■□□□□ 0.59
VCP-203ENST00000448530 SLC16A5O15375 505 aa18.75■□□□□ 0.59
VCP-203ENST00000448530 ALOX12BO75342 701 aa18.75■□□□□ 0.59
VCP-203ENST00000448530 AHSGP02765 367 aa18.75■□□□□ 0.59
VCP-203ENST00000448530 ACPPP15309 386 aa18.75■□□□□ 0.59
VCP-203ENST00000448530 GNLYP22749 145 aa18.75■□□□□ 0.59
VCP-203ENST00000448530 IVDP26440 423 aa18.75■□□□□ 0.59
VCP-203ENST00000448530 ELK3P41970 407 aa18.75■□□□□ 0.59
VCP-203ENST00000448530 ARL4CP56559 192 aa18.75■□□□□ 0.59
VCP-203ENST00000448530 IL2P60568 153 aa18.75■□□□□ 0.59
VCP-203ENST00000448530 TBPL1P62380 186 aa18.75■□□□□ 0.59
VCP-203ENST00000448530 DSG2Q14126 1118 aa18.75■□□□□ 0.59
VCP-203ENST00000448530 NDUFA9Q16795 377 aa18.75■□□□□ 0.59
VCP-203ENST00000448530 RBM20Q5T481 1227 aaKnown RBP18.75■□□□□ 0.59
VCP-203ENST00000448530 AGAP7PQ5VUJ5 663 aa18.75■□□□□ 0.59
VCP-203ENST00000448530 CREG2Q8IUH2 290 aa18.75■□□□□ 0.59
VCP-203ENST00000448530 IGDCC3Q8IVU1 814 aa18.75■□□□□ 0.59
VCP-203ENST00000448530 PARP9Q8IXQ6 854 aa18.75■□□□□ 0.59
VCP-203ENST00000448530 LRRC56Q8IYG6 542 aaPredicted RBP18.75■□□□□ 0.59
VCP-203ENST00000448530 GPATCH11Q8N954 259 aa18.75■□□□□ 0.59
VCP-203ENST00000448530 Q8NA96 180 aa18.75■□□□□ 0.59
VCP-203ENST00000448530 OR11G2Q8NGC1 345 aa18.75■□□□□ 0.59
VCP-203ENST00000448530 ALKBH8Q96BT7 664 aaKnown RBP18.75■□□□□ 0.59
VCP-203ENST00000448530 LRRC39Q96DD0 335 aa18.75■□□□□ 0.59
VCP-203ENST00000448530 LINGO1Q96FE5 620 aa18.75■□□□□ 0.59
VCP-203ENST00000448530 PRAP1Q96NZ9 151 aa18.75■□□□□ 0.59
VCP-203ENST00000448530 AGAP4Q96P64 663 aa18.75■□□□□ 0.59
VCP-203ENST00000448530 DRC3Q9H069 523 aa18.75■□□□□ 0.59
VCP-203ENST00000448530 CUEDC1Q9NWM3 386 aaPredicted RBP18.75■□□□□ 0.59
VCP-203ENST00000448530 ADAMTS6Q9UKP5 1117 aa18.75■□□□□ 0.59
VCP-203ENST00000448530 CORO1CQ9ULV4 474 aaPredicted RBP18.75■□□□□ 0.59
VCP-203ENST00000448530 PDE10AQ9Y233 779 aa18.75■□□□□ 0.59
VCP-203ENST00000448530 DOCK10Q96BY6 2186 aa18.74■□□□□ 0.59
VCP-203ENST00000448530 CCDC188H7C350 402 aa18.74■□□□□ 0.59
VCP-203ENST00000448530 CCND1P24385 295 aa18.74■□□□□ 0.59
VCP-203ENST00000448530 CXCR2P25025 360 aa18.74■□□□□ 0.59
VCP-203ENST00000448530 GABRB3P28472 473 aa18.74■□□□□ 0.59
VCP-203ENST00000448530 CDKN2DP55273 166 aa18.74■□□□□ 0.59
VCP-203ENST00000448530 PLEKHN1Q494U1 663 aaPredicted RBP18.74■□□□□ 0.59
VCP-203ENST00000448530 PRR30Q53SZ7 412 aaPredicted RBP18.74■□□□□ 0.59
VCP-203ENST00000448530 VWA2Q5GFL6 755 aa18.74■□□□□ 0.59
VCP-203ENST00000448530 AGTRAPQ6RW13 159 aa18.74■□□□□ 0.59
VCP-203ENST00000448530 GALNT7Q86SF2 657 aa18.74■□□□□ 0.59
VCP-203ENST00000448530 C17orf64Q86WR6 236 aa18.74■□□□□ 0.59
VCP-203ENST00000448530 PLD3Q8IV08 490 aa18.74■□□□□ 0.59
VCP-203ENST00000448530 SNF8Q96H20 258 aa18.74■□□□□ 0.59
VCP-203ENST00000448530 TRIM54Q9BYV2 358 aa18.74■□□□□ 0.59
VCP-203ENST00000448530 LHPPQ9H008 270 aa18.74■□□□□ 0.59
VCP-203ENST00000448530 MKKSQ9NPJ1 570 aaPredicted RBP18.74■□□□□ 0.59
VCP-203ENST00000448530 C14orf105Q9NVL8 296 aa18.74■□□□□ 0.59
VCP-203ENST00000448530 IGLV3-12A0A075B6K2 115 aa18.73■□□□□ 0.59
VCP-203ENST00000448530 TTI1O43156 1089 aa18.73■□□□□ 0.59
VCP-203ENST00000448530 HPP00738 406 aa18.73■□□□□ 0.59
VCP-203ENST00000448530 AVPR1BP47901 424 aa18.73■□□□□ 0.59
VCP-203ENST00000448530 UQCRFS1P47985 274 aa18.73■□□□□ 0.59
VCP-203ENST00000448530 ITGA8P53708 1063 aa18.73■□□□□ 0.59
VCP-203ENST00000448530 EMP2P54851 167 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms