RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 C19orf47Q8N9M1 422 aaKnown RBP17.28■□□□□ 0.36
TRAPPC4-203ENST00000447216 ZNF740Q8NDX6 193 aa17.28■□□□□ 0.36
TRAPPC4-203ENST00000447216 PLCD4Q9BRC7 762 aa17.28■□□□□ 0.36
TRAPPC4-203ENST00000447216 RTKNQ9BST9 563 aa17.28■□□□□ 0.36
TRAPPC4-203ENST00000447216 CAPS2Q9BXY5 557 aa17.28■□□□□ 0.36
TRAPPC4-203ENST00000447216 PELI2Q9HAT8 420 aa17.28■□□□□ 0.36
TRAPPC4-203ENST00000447216 SOHLH2Q9NX45 425 aa17.28■□□□□ 0.36
TRAPPC4-203ENST00000447216 FAM53CQ9NYF3 392 aa17.28■□□□□ 0.36
TRAPPC4-203ENST00000447216 PDP2Q9P2J9 529 aa17.28■□□□□ 0.36
TRAPPC4-203ENST00000447216 SNX7Q9UNH6 387 aa17.28■□□□□ 0.36
TRAPPC4-203ENST00000447216 RNF11Q9Y3C5 154 aa17.28■□□□□ 0.36
TRAPPC4-203ENST00000447216 FEZF1A0PJY2 475 aa17.27■□□□□ 0.36
TRAPPC4-203ENST00000447216 H2AFYO75367 372 aaKnown RBP17.27■□□□□ 0.36
TRAPPC4-203ENST00000447216 DKK1O94907 266 aa17.27■□□□□ 0.36
TRAPPC4-203ENST00000447216 OR4F21O95013 312 aa17.27■□□□□ 0.36
TRAPPC4-203ENST00000447216 ZFP36L1Q07352 338 aaKnown RBP17.27■□□□□ 0.36
TRAPPC4-203ENST00000447216 BST1Q10588 318 aa17.27■□□□□ 0.36
TRAPPC4-203ENST00000447216 LCP2Q13094 533 aa17.27■□□□□ 0.36
TRAPPC4-203ENST00000447216 STX3Q13277 289 aa17.27■□□□□ 0.36
TRAPPC4-203ENST00000447216 SLBPQ14493 270 aaKnown RBP eCLIP17.27■□□□□ 0.36
TRAPPC4-203ENST00000447216 ARL13AQ5H913 290 aaPredicted RBP17.27■□□□□ 0.36
TRAPPC4-203ENST00000447216 HES3Q5TGS1 186 aa17.27■□□□□ 0.36
TRAPPC4-203ENST00000447216 CDCP2Q5VXM1 449 aa17.27■□□□□ 0.36
TRAPPC4-203ENST00000447216 ATG9BQ674R7 924 aa17.27■□□□□ 0.36
TRAPPC4-203ENST00000447216 LETMD1Q6P1Q0 360 aa17.27■□□□□ 0.36
TRAPPC4-203ENST00000447216 MYLK4Q86YV6 388 aaPredicted RBP17.27■□□□□ 0.36
TRAPPC4-203ENST00000447216 ABHD11Q8NFV4 315 aa17.27■□□□□ 0.36
TRAPPC4-203ENST00000447216 OR4F6Q8NGB9 312 aa17.27■□□□□ 0.36
TRAPPC4-203ENST00000447216 AGAP11Q8TF27 550 aa17.27■□□□□ 0.36
TRAPPC4-203ENST00000447216 ZNF75CPQ92670 426 aaPredicted RBP17.27■□□□□ 0.36
TRAPPC4-203ENST00000447216 CNDP1Q96KN2 507 aa17.27■□□□□ 0.36
TRAPPC4-203ENST00000447216 ACTR8Q9H981 624 aa17.27■□□□□ 0.36
TRAPPC4-203ENST00000447216 FAM60AQ9NP50 221 aa17.27■□□□□ 0.36
TRAPPC4-203ENST00000447216 TNFRSF12AQ9NP84 129 aa17.27■□□□□ 0.36
TRAPPC4-203ENST00000447216 MID1IP1Q9NPA3 183 aa17.27■□□□□ 0.36
TRAPPC4-203ENST00000447216 TMEM184CQ9NVA4 438 aa17.27■□□□□ 0.36
TRAPPC4-203ENST00000447216 GEMIN8Q9NWZ8 242 aaKnown RBP17.27■□□□□ 0.36
TRAPPC4-203ENST00000447216 SEMA5BQ9P283 1151 aa17.27■□□□□ 0.36
TRAPPC4-203ENST00000447216 ZNF225Q9UK10 706 aa17.27■□□□□ 0.36
TRAPPC4-203ENST00000447216 OR2A25A4D2G3 310 aa17.26■□□□□ 0.35
TRAPPC4-203ENST00000447216 CTSVO60911 334 aa17.26■□□□□ 0.35
TRAPPC4-203ENST00000447216 ZBTB11O95625 1053 aaPredicted RBP17.26■□□□□ 0.35
TRAPPC4-203ENST00000447216 MLYCDO95822 493 aa17.26■□□□□ 0.35
TRAPPC4-203ENST00000447216 MT-CO3P00414 261 aa17.26■□□□□ 0.35
TRAPPC4-203ENST00000447216 OTCP00480 354 aa17.26■□□□□ 0.35
TRAPPC4-203ENST00000447216 MLLT3P42568 568 aaPredicted RBP17.26■□□□□ 0.35
TRAPPC4-203ENST00000447216 GYS2P54840 703 aa17.26■□□□□ 0.35
TRAPPC4-203ENST00000447216 INHBCP55103 352 aa17.26■□□□□ 0.35
TRAPPC4-203ENST00000447216 ERVPABLB-1P60509 514 aa17.26■□□□□ 0.35
TRAPPC4-203ENST00000447216 ABCE1P61221 599 aaKnown RBP17.26■□□□□ 0.35
TRAPPC4-203ENST00000447216 SH3BP2P78314 561 aa17.26■□□□□ 0.35
TRAPPC4-203ENST00000447216 REEP5Q00765 189 aa17.26■□□□□ 0.35
TRAPPC4-203ENST00000447216 CYP4F3Q08477 520 aa17.26■□□□□ 0.35
TRAPPC4-203ENST00000447216 KCNAB1Q14722 419 aa17.26■□□□□ 0.35
TRAPPC4-203ENST00000447216 DEFB110Q30KQ9 67 aa17.26■□□□□ 0.35
TRAPPC4-203ENST00000447216 GPRIN3Q6ZVF9 776 aa17.26■□□□□ 0.35
TRAPPC4-203ENST00000447216 ARHGAP22Q7Z5H3 698 aa17.26■□□□□ 0.35
TRAPPC4-203ENST00000447216 MILR1Q7Z6M3 343 aa17.26■□□□□ 0.35
TRAPPC4-203ENST00000447216 FAM129CQ86XR2 697 aa17.26■□□□□ 0.35
TRAPPC4-203ENST00000447216 TRIM42Q8IWZ5 723 aa17.26■□□□□ 0.35
TRAPPC4-203ENST00000447216 OR4K1Q8NGD4 311 aa17.26■□□□□ 0.35
TRAPPC4-203ENST00000447216 CKAP2Q8WWK9 683 aa17.26■□□□□ 0.35
TRAPPC4-203ENST00000447216 KLHL6Q8WZ60 621 aa17.26■□□□□ 0.35
TRAPPC4-203ENST00000447216 ZUFSPQ96AP4 578 aa17.26■□□□□ 0.35
TRAPPC4-203ENST00000447216 PTCD3Q96EY7 689 aaKnown RBP17.26■□□□□ 0.35
TRAPPC4-203ENST00000447216 FCRL4Q96PJ5 515 aa17.26■□□□□ 0.35
TRAPPC4-203ENST00000447216 ZNF382Q96SR6 550 aa17.26■□□□□ 0.35
TRAPPC4-203ENST00000447216 NTMT1Q9BV86 223 aa17.26■□□□□ 0.35
TRAPPC4-203ENST00000447216 C20orf27Q9GZN8 174 aa17.26■□□□□ 0.35
TRAPPC4-203ENST00000447216 DRC3Q9H069 523 aa17.26■□□□□ 0.35
TRAPPC4-203ENST00000447216 ZNF768Q9H5H4 540 aaKnown RBP17.26■□□□□ 0.35
TRAPPC4-203ENST00000447216 MANSC1Q9H8J5 431 aa17.26■□□□□ 0.35
TRAPPC4-203ENST00000447216 SYNPO2LQ9H987 977 aa17.26■□□□□ 0.35
TRAPPC4-203ENST00000447216 KLK4Q9Y5K2 254 aa17.26■□□□□ 0.35
TRAPPC4-203ENST00000447216 SCN3AQ9NY46 2000 aa17.25■□□□□ 0.35
TRAPPC4-203ENST00000447216 TMEM114B3SHH9 223 aa17.25■□□□□ 0.35
TRAPPC4-203ENST00000447216 HCRTR1O43613 425 aa17.25■□□□□ 0.35
TRAPPC4-203ENST00000447216 LCMT2O60294 686 aaKnown RBP17.25■□□□□ 0.35
TRAPPC4-203ENST00000447216 CSO75390 466 aaKnown RBP17.25■□□□□ 0.35
TRAPPC4-203ENST00000447216 WFS1O76024 890 aa17.25■□□□□ 0.35
TRAPPC4-203ENST00000447216 CLDN9O95484 217 aa17.25■□□□□ 0.35
TRAPPC4-203ENST00000447216 HRH2P25021 359 aa17.25■□□□□ 0.35
TRAPPC4-203ENST00000447216 CASP2P42575 452 aa17.25■□□□□ 0.35
TRAPPC4-203ENST00000447216 SLC1A6P48664 564 aa17.25■□□□□ 0.35
TRAPPC4-203ENST00000447216 ARL4DP49703 201 aa17.25■□□□□ 0.35
TRAPPC4-203ENST00000447216 NAA20P61599 178 aa17.25■□□□□ 0.35
TRAPPC4-203ENST00000447216 GUCY1A3Q02108 690 aa17.25■□□□□ 0.35
TRAPPC4-203ENST00000447216 PCDH1Q08174 1060 aa17.25■□□□□ 0.35
TRAPPC4-203ENST00000447216 C16orf72Q14CZ0 275 aa17.25■□□□□ 0.35
TRAPPC4-203ENST00000447216 TBCCQ15814 346 aa17.25■□□□□ 0.35
TRAPPC4-203ENST00000447216 TTC19Q6DKK2 380 aaPredicted RBP17.25■□□□□ 0.35
TRAPPC4-203ENST00000447216 CARFQ8N187 725 aa17.25■□□□□ 0.35
TRAPPC4-203ENST00000447216 L3MBTL4Q8NA19 623 aa17.25■□□□□ 0.35
TRAPPC4-203ENST00000447216 LRRC8CQ8TDW0 803 aa17.25■□□□□ 0.35
TRAPPC4-203ENST00000447216 WDR34Q96EX3 536 aa17.25■□□□□ 0.35
TRAPPC4-203ENST00000447216 SLC41A2Q96JW4 573 aa17.25■□□□□ 0.35
TRAPPC4-203ENST00000447216 TMEM74Q96NL1 305 aa17.25■□□□□ 0.35
TRAPPC4-203ENST00000447216 KCNA7Q96RP8 456 aa17.25■□□□□ 0.35
TRAPPC4-203ENST00000447216 AIF1LQ9BQI0 150 aa17.25■□□□□ 0.35
TRAPPC4-203ENST00000447216 EHD1Q9H4M9 534 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms