RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 TRIM39Q9HCM9 518 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 SLC35C2Q9NQQ7 365 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 SMPD3Q9NY59 655 aaPredicted RBP8.32□□□□□ -1.08
PTPN3-204ENST00000446349 SEC14L4Q9UDX3 406 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 CNOT6Q9ULM6 557 aaKnown RBP8.32□□□□□ -1.08
PTPN3-204ENST00000446349 MRPL42Q9Y6G3 142 aaKnown RBP8.32□□□□□ -1.08
PTPN3-204ENST00000446349 ANXA2P2A6NMY6 339 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 KLHL18O94889 574 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 ANXA2P07355 339 aaKnown RBP8.32□□□□□ -1.08
PTPN3-204ENST00000446349 THRBP10828 461 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 MTHFD1P11586 935 aaKnown RBP8.32□□□□□ -1.08
PTPN3-204ENST00000446349 CYBAP13498 195 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 SLC25A3Q00325 362 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 FGL2Q14314 439 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 REP15Q6BDI9 236 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 C2orf73Q8N5S3 287 aaPredicted RBP8.32□□□□□ -1.08
PTPN3-204ENST00000446349 KBTBD7Q8WVZ9 684 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 LPGAT1Q92604 370 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 ADAP2Q9NPF8 381 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 PAK6Q9NQU5 681 aaPredicted RBP8.32□□□□□ -1.08
PTPN3-204ENST00000446349 PLCH1Q4KWH8 1693 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 A0A1W2PRG6 482 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 RNH1P13489 461 aaKnown RBP8.32□□□□□ -1.08
PTPN3-204ENST00000446349 SMSP52788 366 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 SLC14A2Q15849 920 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 TOR1AIP1Q5JTV8 583 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 PLCZ1Q86YW0 608 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 KBTBD2Q8IY47 623 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 UBASH3BQ8TF42 649 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 TRIB2Q92519 343 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 OSTF1Q92882 214 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 C1GALT1C1Q96EU7 318 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 CD320Q9NPF0 282 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 MCUBQ9NWR8 336 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 FBXO9Q9UK97 447 aaPredicted RBP8.32□□□□□ -1.08
PTPN3-204ENST00000446349 RARRES3Q9UL19 164 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 GABRQQ9UN88 632 aa8.32□□□□□ -1.08
PTPN3-204ENST00000446349 CXCR6O00574 342 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 LINGO3P0C6S8 592 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 RBPJQ06330 500 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 ZNF630Q2M218 657 aaPredicted RBP8.31□□□□□ -1.08
PTPN3-204ENST00000446349 RGS21Q2M5E4 152 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 GPRC6AQ5T6X5 926 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 MEIOBQ8N635 442 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 TSEN2Q8NCE0 465 aaKnown RBP8.31□□□□□ -1.08
PTPN3-204ENST00000446349 KLK6Q92876 244 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 RBP7Q96R05 134 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 IFT27Q9BW83 186 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 AK5Q9Y6K8 562 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 AQP12BA6NM10 295 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 FTCDNL1E5RQL4 147 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 CDC7O00311 574 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 ALDOAP04075 364 aaKnown RBP8.31□□□□□ -1.08
PTPN3-204ENST00000446349 MTTPP55157 894 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 HSD17B7P56937 341 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 DNAJB13P59910 316 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 SCARB2Q14108 478 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 UBAP2LQ14157 1087 aaKnown RBP8.31□□□□□ -1.08
PTPN3-204ENST00000446349 TLR1Q15399 786 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 DUOXA1Q1HG43 343 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 MANEALQ5VSG8 457 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 KIAA0895LQ68EN5 471 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 NRROSQ86YC3 692 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 IRF2BP1Q8IU81 584 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 AQP12AQ8IXF9 295 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 SLC35B2Q8TB61 432 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 PNPOQ9NVS9 261 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 DNAJB9Q9UBS3 223 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 POFUT2Q9Y2G5 429 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 MAU2Q9Y6X3 613 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 LINC00854A0A1B0GVQ3 168 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 A6NCN8 305 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 PPEF2O14830 753 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 RAB36O95755 333 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 TAS2R39P59534 338 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 DGCR6Q14129 220 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 FAM174BQ3ZCQ3 159 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 DENND5AQ6IQ26 1287 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 HSDL2Q6YN16 418 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 ZNF572Q7Z3I7 529 aaPredicted RBP8.31□□□□□ -1.08
PTPN3-204ENST00000446349 C14orf80Q86SX3 495 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 OR52E4Q8NGH9 312 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 ADAMTS10Q9H324 1103 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 OAS3Q9Y6K5 1087 aaKnown RBP8.31□□□□□ -1.08
PTPN3-204ENST00000446349 RNGTTO60942 597 aaKnown RBP8.31□□□□□ -1.08
PTPN3-204ENST00000446349 ARHGEF15O94989 841 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 MRPS21P82921 87 aaKnown RBP8.31□□□□□ -1.08
PTPN3-204ENST00000446349 MC1RQ01726 317 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 PDK3Q15120 406 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 CDKL4Q5MAI5 379 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 POMZP3Q6PJE2 187 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 UMODL1-AS1Q8N2C9 162 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 PYROXD2Q8N2H3 581 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 OR5K1Q8NHB7 308 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 KAT2AQ92830 837 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 GORASP1Q9BQQ3 440 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 SLC35A5Q9BS91 424 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 FEM1AQ9BSK4 669 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 PCDHGB6Q9Y5F9 930 aa8.31□□□□□ -1.08
PTPN3-204ENST00000446349 SNX10Q9Y5X0 201 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms