RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 CSNK1A1LQ8N752 337 aa14.08□□□□□ -0.16
USE1-202ENST00000445667 ZNF592Q92610 1267 aa14.08□□□□□ -0.16
USE1-202ENST00000445667 PYCR2Q96C36 320 aa14.08□□□□□ -0.16
USE1-202ENST00000445667 CABS1Q96KC9 395 aa14.08□□□□□ -0.16
USE1-202ENST00000445667 C10orf90Q96M02 699 aa14.08□□□□□ -0.16
USE1-202ENST00000445667 RAB17Q9H0T7 212 aa14.08□□□□□ -0.16
USE1-202ENST00000445667 TMEM184CQ9NVA4 438 aa14.08□□□□□ -0.16
USE1-202ENST00000445667 ARL15Q9NXU5 204 aa14.08□□□□□ -0.16
USE1-202ENST00000445667 NSMCE4AQ9NXX6 385 aa14.08□□□□□ -0.16
USE1-202ENST00000445667 UTP6Q9NYH9 597 aaKnown RBP14.08□□□□□ -0.16
USE1-202ENST00000445667 CTSFQ9UBX1 484 aa14.08□□□□□ -0.16
USE1-202ENST00000445667 RUVBL1Q9Y265 456 aaKnown RBP14.08□□□□□ -0.16
USE1-202ENST00000445667 MTO1Q9Y2Z2 717 aaKnown RBP14.08□□□□□ -0.16
USE1-202ENST00000445667 FASNP49327 2511 aaKnown RBP14.07□□□□□ -0.16
USE1-202ENST00000445667 ZNF462Q96JM2 2506 aa14.07□□□□□ -0.16
USE1-202ENST00000445667 CCDC88CQ9P219 2028 aa14.07□□□□□ -0.16
USE1-202ENST00000445667 CDC7O00311 574 aa14.07□□□□□ -0.16
USE1-202ENST00000445667 GUCA1CO95843 209 aa14.07□□□□□ -0.16
USE1-202ENST00000445667 ALBP02768 609 aa14.07□□□□□ -0.16
USE1-202ENST00000445667 CAV1Q03135 178 aa14.07□□□□□ -0.16
USE1-202ENST00000445667 CKAP4Q07065 602 aaKnown RBP14.07□□□□□ -0.16
USE1-202ENST00000445667 MUM1Q2TAK8 710 aa14.07□□□□□ -0.16
USE1-202ENST00000445667 MED25Q71SY5 747 aa14.07□□□□□ -0.16
USE1-202ENST00000445667 MRGPREQ86SM8 312 aa14.07□□□□□ -0.16
USE1-202ENST00000445667 CEP97Q8IW35 865 aa14.07□□□□□ -0.16
USE1-202ENST00000445667 TMEM102Q8N9M5 508 aaPredicted RBP14.07□□□□□ -0.16
USE1-202ENST00000445667 ANKRD49Q8WVL7 239 aa14.07□□□□□ -0.16
USE1-202ENST00000445667 RERGQ96A58 199 aaPredicted RBP14.07□□□□□ -0.16
USE1-202ENST00000445667 COL26A1Q96A83 441 aa14.07□□□□□ -0.16
USE1-202ENST00000445667 FKBP10Q96AY3 582 aa14.07□□□□□ -0.16
USE1-202ENST00000445667 PDLIM5Q96HC4 596 aaKnown RBP14.07□□□□□ -0.16
USE1-202ENST00000445667 VPS39Q96JC1 886 aa14.07□□□□□ -0.16
USE1-202ENST00000445667 MCMBPQ9BTE3 642 aa14.07□□□□□ -0.16
USE1-202ENST00000445667 LRRC1Q9BTT6 524 aa14.07□□□□□ -0.16
USE1-202ENST00000445667 SLC25A23Q9BV35 468 aa14.07□□□□□ -0.16
USE1-202ENST00000445667 TRIM54Q9BYV2 358 aa14.07□□□□□ -0.16
USE1-202ENST00000445667 RHOJQ9H4E5 214 aa14.07□□□□□ -0.16
USE1-202ENST00000445667 SOX17Q9H6I2 414 aaPredicted RBP14.07□□□□□ -0.16
USE1-202ENST00000445667 ZNF304Q9HCX3 659 aa14.07□□□□□ -0.16
USE1-202ENST00000445667 TCRBV9S1A1TA0A576 114 aa14.06□□□□□ -0.16
USE1-202ENST00000445667 ESYT3A0FGR9 886 aa14.06□□□□□ -0.16
USE1-202ENST00000445667 FEZF1A0PJY2 475 aa14.06□□□□□ -0.16
USE1-202ENST00000445667 PABPN1LA6NDY0 278 aaKnown RBP14.06□□□□□ -0.16
USE1-202ENST00000445667 P2RX6O15547 441 aa14.06□□□□□ -0.16
USE1-202ENST00000445667 NPPBP16860 134 aa14.06□□□□□ -0.16
USE1-202ENST00000445667 ZNF37AP17032 561 aaPredicted RBP14.06□□□□□ -0.16
USE1-202ENST00000445667 MAGEA4P43358 317 aa14.06□□□□□ -0.16
USE1-202ENST00000445667 RRADP55042 308 aa14.06□□□□□ -0.16
USE1-202ENST00000445667 SNRPNP63162 240 aaKnown RBP14.06□□□□□ -0.16
USE1-202ENST00000445667 CSNK1G2P78368 415 aa14.06□□□□□ -0.16
USE1-202ENST00000445667 RELAQ04206 551 aa14.06□□□□□ -0.16
USE1-202ENST00000445667 RAPSNQ13702 412 aa14.06□□□□□ -0.16
USE1-202ENST00000445667 CAPN13Q6MZZ7 669 aaPredicted RBP14.06□□□□□ -0.16
USE1-202ENST00000445667 SBSNQ6UWP8 590 aa14.06□□□□□ -0.16
USE1-202ENST00000445667 PPP1R32Q7Z5V6 425 aa14.06□□□□□ -0.16
USE1-202ENST00000445667 C17orf64Q86WR6 236 aa14.06□□□□□ -0.16
USE1-202ENST00000445667 PRSS58Q8IYP2 241 aa14.06□□□□□ -0.16
USE1-202ENST00000445667 NKAPQ8N5F7 415 aaKnown RBP14.06□□□□□ -0.16
USE1-202ENST00000445667 FDCSPQ8NFU4 85 aa14.06□□□□□ -0.16
USE1-202ENST00000445667 CDKL2Q92772 493 aa14.06□□□□□ -0.16
USE1-202ENST00000445667 FBXL8Q96CD0 374 aa14.06□□□□□ -0.16
USE1-202ENST00000445667 SPSB2Q99619 263 aa14.06□□□□□ -0.16
USE1-202ENST00000445667 MACROD1Q9BQ69 325 aa14.06□□□□□ -0.16
USE1-202ENST00000445667 SGPP1Q9BX95 441 aa14.06□□□□□ -0.16
USE1-202ENST00000445667 UNKQ9C0B0 810 aaKnown RBP14.06□□□□□ -0.16
USE1-202ENST00000445667 PCBD2Q9H0N5 130 aa14.06□□□□□ -0.16
USE1-202ENST00000445667 SLC26A1Q9H2B4 701 aa14.06□□□□□ -0.16
USE1-202ENST00000445667 CAB39LQ9H9S4 337 aa14.06□□□□□ -0.16
USE1-202ENST00000445667 P4HTMQ9NXG6 502 aa14.06□□□□□ -0.16
USE1-202ENST00000445667 BSNQ9UPA5 3926 aa14.06□□□□□ -0.16
USE1-202ENST00000445667 NPEPPSL1A6NEC2 478 aa14.05□□□□□ -0.16
USE1-202ENST00000445667 FAM159BA6NKW6 160 aa14.05□□□□□ -0.16
USE1-202ENST00000445667 VSTM2BA6NLU5 285 aa14.05□□□□□ -0.16
USE1-202ENST00000445667 PEX12O00623 359 aa14.05□□□□□ -0.16
USE1-202ENST00000445667 FFAR3O14843 346 aa14.05□□□□□ -0.16
USE1-202ENST00000445667 GPR42O15529 346 aa14.05□□□□□ -0.16
USE1-202ENST00000445667 LCMT2O60294 686 aaKnown RBP14.05□□□□□ -0.16
USE1-202ENST00000445667 ZIC2O95409 532 aaPredicted RBP14.05□□□□□ -0.16
USE1-202ENST00000445667 C1QAP02745 245 aa14.05□□□□□ -0.16
USE1-202ENST00000445667 CDH1P12830 882 aa14.05□□□□□ -0.16
USE1-202ENST00000445667 HRH2P25021 359 aa14.05□□□□□ -0.16
USE1-202ENST00000445667 AP1S2P56377 157 aa14.05□□□□□ -0.16
USE1-202ENST00000445667 TLE1Q04724 770 aa14.05□□□□□ -0.16
USE1-202ENST00000445667 KLRB1Q12918 225 aa14.05□□□□□ -0.16
USE1-202ENST00000445667 WHAMMP3Q1A5X7 153 aa14.05□□□□□ -0.16
USE1-202ENST00000445667 C8orf74Q6P047 294 aa14.05□□□□□ -0.16
USE1-202ENST00000445667 PRMT9Q6P2P2 845 aa14.05□□□□□ -0.16
USE1-202ENST00000445667 LCTLQ6UWM7 567 aa14.05□□□□□ -0.16
USE1-202ENST00000445667 CYS1Q717R9 158 aa14.05□□□□□ -0.16
USE1-202ENST00000445667 VN1R4Q7Z5H5 301 aa14.05□□□□□ -0.16
USE1-202ENST00000445667 CTAGE3PQ8IX95 158 aa14.05□□□□□ -0.16
USE1-202ENST00000445667 ARHGEF39Q8N4T4 335 aa14.05□□□□□ -0.16
USE1-202ENST00000445667 TEX19Q8NA77 164 aa14.05□□□□□ -0.16
USE1-202ENST00000445667 OR56A3Q8NH54 315 aa14.05□□□□□ -0.16
USE1-202ENST00000445667 STT3BQ8TCJ2 826 aa14.05□□□□□ -0.16
USE1-202ENST00000445667 IP6K3Q96PC2 410 aa14.05□□□□□ -0.16
USE1-202ENST00000445667 OR4K3Q96R72 315 aa14.05□□□□□ -0.16
USE1-202ENST00000445667 NUDT9Q9BW91 350 aa14.05□□□□□ -0.16
USE1-202ENST00000445667 YIPF2Q9BWQ6 316 aa14.05□□□□□ -0.16
USE1-202ENST00000445667 EPN3Q9H201 632 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms