RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 ERN2Q76MJ5 926 aaKnown RBP4.05□□□□□ -1.76
HMGB3P6-201ENST00000444896 NOTCH2NLQ7Z3S9 236 aa4.05□□□□□ -1.76
HMGB3P6-201ENST00000444896 MMD2Q8IY49 270 aa4.05□□□□□ -1.76
HMGB3P6-201ENST00000444896 VANGL1Q8TAA9 524 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P6-201ENST00000444896 LGALS12Q96DT0 336 aa4.05□□□□□ -1.76
HMGB3P6-201ENST00000444896 THOC1Q96FV9 657 aaKnown RBP4.05□□□□□ -1.76
HMGB3P6-201ENST00000444896 FAM71F1Q96KD3 344 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P6-201ENST00000444896 LITAFQ99732 161 aa4.05□□□□□ -1.76
HMGB3P6-201ENST00000444896 OR2B2Q9GZK3 357 aa4.05□□□□□ -1.76
HMGB3P6-201ENST00000444896 PNNQ9H307 717 aaKnown RBP4.05□□□□□ -1.76
HMGB3P6-201ENST00000444896 CPVLQ9H3G5 476 aa4.05□□□□□ -1.76
HMGB3P6-201ENST00000444896 TLE6Q9H808 572 aa4.05□□□□□ -1.76
HMGB3P6-201ENST00000444896 ADGRB2O60241 1585 aa4.05□□□□□ -1.76
HMGB3P6-201ENST00000444896 ATP7BP35670 1465 aa4.05□□□□□ -1.76
HMGB3P6-201ENST00000444896 RIMS2Q9UQ26 1411 aa4.04□□□□□ -1.76
HMGB3P6-201ENST00000444896 KNDC1Q76NI1 1749 aa4.04□□□□□ -1.76
HMGB3P6-201ENST00000444896 STK36Q9NRP7 1315 aa4.04□□□□□ -1.76
HMGB3P6-201ENST00000444896 MAPK8IP3Q9UPT6 1336 aa4.04□□□□□ -1.76
HMGB3P6-201ENST00000444896 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.04□□□□□ -1.76
HMGB3P6-201ENST00000444896 CCDC188H7C350 402 aa4.04□□□□□ -1.76
HMGB3P6-201ENST00000444896 CLPTM1O96005 669 aa4.04□□□□□ -1.76
HMGB3P6-201ENST00000444896 EDN1P05305 212 aa4.04□□□□□ -1.76
HMGB3P6-201ENST00000444896 GPIP06744 558 aa4.04□□□□□ -1.76
HMGB3P6-201ENST00000444896 PLA2G4BP0C869 781 aa4.04□□□□□ -1.76
HMGB3P6-201ENST00000444896 FAM157CP0CG43 387 aa4.04□□□□□ -1.76
HMGB3P6-201ENST00000444896 EPCAMP16422 314 aa4.04□□□□□ -1.76
HMGB3P6-201ENST00000444896 EEF1B2P24534 225 aaKnown RBP4.04□□□□□ -1.76
HMGB3P6-201ENST00000444896 CD27P26842 260 aa4.04□□□□□ -1.76
HMGB3P6-201ENST00000444896 WNT5AP41221 380 aa4.04□□□□□ -1.76
HMGB3P6-201ENST00000444896 TNNT2P45379 298 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P6-201ENST00000444896 CRIP2P52943 208 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P6-201ENST00000444896 MZT1Q08AG7 82 aa4.04□□□□□ -1.76
HMGB3P6-201ENST00000444896 SQLEQ14534 574 aa4.04□□□□□ -1.76
HMGB3P6-201ENST00000444896 SLC25A53Q5H9E4 307 aa4.04□□□□□ -1.76
HMGB3P6-201ENST00000444896 PPP1R21Q6ZMI0 780 aa4.04□□□□□ -1.76
HMGB3P6-201ENST00000444896 IL17RELQ6ZVW7 336 aa4.04□□□□□ -1.76
HMGB3P6-201ENST00000444896 FAM219AQ8IW50 185 aa4.04□□□□□ -1.76
HMGB3P6-201ENST00000444896 CDK20Q8IZL9 346 aa4.04□□□□□ -1.76
HMGB3P6-201ENST00000444896 CNBD1Q8NA66 436 aa4.04□□□□□ -1.76
HMGB3P6-201ENST00000444896 OR4K1Q8NGD4 311 aa4.04□□□□□ -1.76
HMGB3P6-201ENST00000444896 OR2T11Q8NH01 316 aa4.04□□□□□ -1.76
HMGB3P6-201ENST00000444896 OR4C3Q8NH37 302 aa4.04□□□□□ -1.76
HMGB3P6-201ENST00000444896 GIMAP5Q96F15 307 aa4.04□□□□□ -1.76
HMGB3P6-201ENST00000444896 PRAM1Q96QH2 718 aa4.04□□□□□ -1.76
HMGB3P6-201ENST00000444896 CCDC3Q9BQI4 270 aa4.04□□□□□ -1.76
HMGB3P6-201ENST00000444896 URM1Q9BTM9 101 aaKnown RBP4.04□□□□□ -1.76
HMGB3P6-201ENST00000444896 FSD1Q9BTV5 496 aa4.04□□□□□ -1.76
HMGB3P6-201ENST00000444896 MIS12Q9H081 205 aa4.04□□□□□ -1.76
HMGB3P6-201ENST00000444896 TRPV4Q9HBA0 871 aa4.04□□□□□ -1.76
HMGB3P6-201ENST00000444896 CHCHD3Q9NX63 227 aaKnown RBP4.04□□□□□ -1.76
HMGB3P6-201ENST00000444896 P4HTMQ9NXG6 502 aa4.04□□□□□ -1.76
HMGB3P6-201ENST00000444896 STUB1Q9UNE7 303 aa4.04□□□□□ -1.76
HMGB3P6-201ENST00000444896 A2ML1A8K2U0 1454 aa4.04□□□□□ -1.76
HMGB3P6-201ENST00000444896 HEG1Q9ULI3 1381 aa4.03□□□□□ -1.76
HMGB3P6-201ENST00000444896 TSPY2A6NKD2 308 aa4.03□□□□□ -1.76
HMGB3P6-201ENST00000444896 C2orf81A6NN90 581 aa4.03□□□□□ -1.76
HMGB3P6-201ENST00000444896 DFFBO76075 338 aa4.03□□□□□ -1.76
HMGB3P6-201ENST00000444896 HSPA4LO95757 839 aa4.03□□□□□ -1.76
HMGB3P6-201ENST00000444896 GSRP00390 522 aa4.03□□□□□ -1.76
HMGB3P6-201ENST00000444896 TSPY3P0CV98 308 aa4.03□□□□□ -1.76
HMGB3P6-201ENST00000444896 TSPY8P0CW00 308 aa4.03□□□□□ -1.76
HMGB3P6-201ENST00000444896 CEACAM1P13688 526 aa4.03□□□□□ -1.76
HMGB3P6-201ENST00000444896 IRF2P14316 349 aa4.03□□□□□ -1.76
HMGB3P6-201ENST00000444896 CDH3P22223 829 aa4.03□□□□□ -1.76
HMGB3P6-201ENST00000444896 CDC25CP30307 473 aa4.03□□□□□ -1.76
HMGB3P6-201ENST00000444896 NPY4RP50391 375 aa4.03□□□□□ -1.76
HMGB3P6-201ENST00000444896 NR0B1P51843 470 aaKnown RBP4.03□□□□□ -1.76
HMGB3P6-201ENST00000444896 TSPY1Q01534 308 aa4.03□□□□□ -1.76
HMGB3P6-201ENST00000444896 CDR2Q01850 454 aa4.03□□□□□ -1.76
HMGB3P6-201ENST00000444896 TFCP2Q12800 502 aa4.03□□□□□ -1.76
HMGB3P6-201ENST00000444896 NPTX1Q15818 432 aa4.03□□□□□ -1.76
HMGB3P6-201ENST00000444896 ZNF876PQ49A33 203 aa4.03□□□□□ -1.76
HMGB3P6-201ENST00000444896 C6orf136Q5SQH8 315 aa4.03□□□□□ -1.76
HMGB3P6-201ENST00000444896 C20orf194Q5TEA3 1177 aa4.03□□□□□ -1.76
HMGB3P6-201ENST00000444896 ARMC3Q5W041 872 aa4.03□□□□□ -1.76
HMGB3P6-201ENST00000444896 TRAT1Q6PIZ9 186 aa4.03□□□□□ -1.76
HMGB3P6-201ENST00000444896 CCAR2Q8N163 923 aaKnown RBP4.03□□□□□ -1.76
HMGB3P6-201ENST00000444896 SIPA1Q96FS4 1042 aa4.03□□□□□ -1.76
HMGB3P6-201ENST00000444896 PRAC1Q96KF2 57 aa4.03□□□□□ -1.76
HMGB3P6-201ENST00000444896 DUX3Q96PT4 197 aa4.03□□□□□ -1.76
HMGB3P6-201ENST00000444896 KATNB1Q9BVA0 655 aa4.03□□□□□ -1.76
HMGB3P6-201ENST00000444896 C2orf42Q9NWW7 574 aa4.03□□□□□ -1.76
HMGB3P6-201ENST00000444896 DDX43Q9NXZ2 648 aaKnown RBP4.03□□□□□ -1.76
HMGB3P6-201ENST00000444896 POLLQ9UGP5 575 aa4.03□□□□□ -1.76
HMGB3P6-201ENST00000444896 SETD1AO15047 1707 aaKnown RBP4.03□□□□□ -1.76
HMGB3P6-201ENST00000444896 CDC42BPGQ6DT37 1551 aa4.02□□□□□ -1.77
HMGB3P6-201ENST00000444896 CPS1P31327 1500 aa4.02□□□□□ -1.77
HMGB3P6-201ENST00000444896 A0A087X002 238 aa4.02□□□□□ -1.77
HMGB3P6-201ENST00000444896 MSGN1A6NI15 193 aa4.02□□□□□ -1.77
HMGB3P6-201ENST00000444896 HHLA1C9JL84 531 aa4.02□□□□□ -1.77
HMGB3P6-201ENST00000444896 TRMUO75648 421 aaKnown RBP4.02□□□□□ -1.77
HMGB3P6-201ENST00000444896 AP2A2O94973 939 aa4.02□□□□□ -1.77
HMGB3P6-201ENST00000444896 EML2O95834 649 aa4.02□□□□□ -1.77
HMGB3P6-201ENST00000444896 FDPSP14324 419 aaKnown RBP4.02□□□□□ -1.77
HMGB3P6-201ENST00000444896 IFNAR1P17181 557 aa4.02□□□□□ -1.77
HMGB3P6-201ENST00000444896 VAMP7P51809 220 aa4.02□□□□□ -1.77
HMGB3P6-201ENST00000444896 GSDMDP57764 484 aa4.02□□□□□ -1.77
HMGB3P6-201ENST00000444896 TAF13Q15543 124 aa4.02□□□□□ -1.77
HMGB3P6-201ENST00000444896 TMEM30BQ3MIR4 351 aa4.02□□□□□ -1.77
HMGB3P6-201ENST00000444896 GTDC1Q4AE62 458 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms