RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 KBTBD12Q3ZCT8 623 aa17.79■□□□□ 0.44
CCDC188-202ENST00000444532 GRTP1Q5TC63 336 aa17.79■□□□□ 0.44
CCDC188-202ENST00000444532 CAPN13Q6MZZ7 669 aaPredicted RBP17.79■□□□□ 0.44
CCDC188-202ENST00000444532 PRMT9Q6P2P2 845 aa17.79■□□□□ 0.44
CCDC188-202ENST00000444532 LCTLQ6UWM7 567 aa17.79■□□□□ 0.44
CCDC188-202ENST00000444532 SBSNQ6UWP8 590 aa17.79■□□□□ 0.44
CCDC188-202ENST00000444532 CEP128Q6ZU80 1094 aa17.79■□□□□ 0.44
CCDC188-202ENST00000444532 ZNF605Q86T29 641 aa17.79■□□□□ 0.44
CCDC188-202ENST00000444532 CTAGE6Q86UF2 777 aa17.79■□□□□ 0.44
CCDC188-202ENST00000444532 C17orf64Q86WR6 236 aa17.79■□□□□ 0.44
CCDC188-202ENST00000444532 RAB43Q86YS6 212 aa17.79■□□□□ 0.44
CCDC188-202ENST00000444532 CTAGE4Q8IX94 777 aa17.79■□□□□ 0.44
CCDC188-202ENST00000444532 CTAGE3PQ8IX95 158 aa17.79■□□□□ 0.44
CCDC188-202ENST00000444532 OR2Y1Q8NGV0 311 aa17.79■□□□□ 0.44
CCDC188-202ENST00000444532 OR56A3Q8NH54 315 aa17.79■□□□□ 0.44
CCDC188-202ENST00000444532 C9orf43Q8TAL5 461 aaPredicted RBP17.79■□□□□ 0.44
CCDC188-202ENST00000444532 PTERQ96BW5 349 aa17.79■□□□□ 0.44
CCDC188-202ENST00000444532 FBXL8Q96CD0 374 aa17.79■□□□□ 0.44
CCDC188-202ENST00000444532 ABHD17AQ96GS6 310 aa17.79■□□□□ 0.44
CCDC188-202ENST00000444532 PRAP1Q96NZ9 151 aa17.79■□□□□ 0.44
CCDC188-202ENST00000444532 IP6K3Q96PC2 410 aa17.79■□□□□ 0.44
CCDC188-202ENST00000444532 RBBP8Q99708 897 aa17.79■□□□□ 0.44
CCDC188-202ENST00000444532 HAUS8Q9BT25 410 aa17.79■□□□□ 0.44
CCDC188-202ENST00000444532 WDR54Q9H977 334 aa17.79■□□□□ 0.44
CCDC188-202ENST00000444532 GPAMQ9HCL2 828 aa17.79■□□□□ 0.44
CCDC188-202ENST00000444532 SLC22A11Q9NSA0 550 aa17.79■□□□□ 0.44
CCDC188-202ENST00000444532 CUEDC1Q9NWM3 386 aaPredicted RBP17.79■□□□□ 0.44
CCDC188-202ENST00000444532 PTRH2Q9Y3E5 179 aaKnown RBP17.79■□□□□ 0.44
CCDC188-202ENST00000444532 HAT1O14929 419 aa17.78■□□□□ 0.44
CCDC188-202ENST00000444532 NPPBP16860 134 aa17.78■□□□□ 0.44
CCDC188-202ENST00000444532 SPRP35270 261 aaPredicted RBP17.78■□□□□ 0.44
CCDC188-202ENST00000444532 FOLR3P41439 243 aa17.78■□□□□ 0.44
CCDC188-202ENST00000444532 NAB1Q13506 487 aa17.78■□□□□ 0.44
CCDC188-202ENST00000444532 ZNF460Q14592 562 aa17.78■□□□□ 0.44
CCDC188-202ENST00000444532 USP10Q14694 798 aaKnown RBP17.78■□□□□ 0.44
CCDC188-202ENST00000444532 SLC9A5Q14940 896 aa17.78■□□□□ 0.44
CCDC188-202ENST00000444532 FAM69BQ5VUD6 431 aa17.78■□□□□ 0.44
CCDC188-202ENST00000444532 GARNL3Q5VVW2 1013 aa17.78■□□□□ 0.44
CCDC188-202ENST00000444532 CSNK1A1LQ8N752 337 aa17.78■□□□□ 0.44
CCDC188-202ENST00000444532 NOA1Q8NC60 698 aaKnown RBP17.78■□□□□ 0.44
CCDC188-202ENST00000444532 GPR22Q99680 433 aa17.78■□□□□ 0.44
CCDC188-202ENST00000444532 TSPYL1Q9H0U9 437 aa17.78■□□□□ 0.44
CCDC188-202ENST00000444532 SLC26A1Q9H2B4 701 aa17.78■□□□□ 0.44
CCDC188-202ENST00000444532 MTRF1LQ9UGC7 380 aaKnown RBP17.78■□□□□ 0.44
CCDC188-202ENST00000444532 IKZF3Q9UKT9 509 aa17.78■□□□□ 0.44
CCDC188-202ENST00000444532 KCNE1BA0A087WTH5 132 aa17.77■□□□□ 0.44
CCDC188-202ENST00000444532 CDC7O00311 574 aa17.77■□□□□ 0.44
CCDC188-202ENST00000444532 CNOT3O75175 753 aaKnown RBP17.77■□□□□ 0.44
CCDC188-202ENST00000444532 WISP3O95389 354 aaPredicted RBP17.77■□□□□ 0.44
CCDC188-202ENST00000444532 GUCA1CO95843 209 aa17.77■□□□□ 0.44
CCDC188-202ENST00000444532 RPS15AP62244 130 aaKnown RBP17.77■□□□□ 0.44
CCDC188-202ENST00000444532 CDKL1Q00532 357 aa17.77■□□□□ 0.44
CCDC188-202ENST00000444532 COL9A2Q14055 689 aaPredicted RBP17.77■□□□□ 0.44
CCDC188-202ENST00000444532 PPP1R3AQ16821 1122 aa17.77■□□□□ 0.44
CCDC188-202ENST00000444532 ZXDCQ2QGD7 858 aaPredicted RBP17.77■□□□□ 0.44
CCDC188-202ENST00000444532 MED25Q71SY5 747 aa17.77■□□□□ 0.44
CCDC188-202ENST00000444532 PPM1NQ8N819 430 aa17.77■□□□□ 0.44
CCDC188-202ENST00000444532 FBF1Q8TES7 1133 aa17.77■□□□□ 0.44
CCDC188-202ENST00000444532 ANKRD49Q8WVL7 239 aa17.77■□□□□ 0.44
CCDC188-202ENST00000444532 NACC2Q96BF6 587 aa17.77■□□□□ 0.44
CCDC188-202ENST00000444532 ALKBH8Q96BT7 664 aaKnown RBP17.77■□□□□ 0.44
CCDC188-202ENST00000444532 THAP11Q96EK4 314 aa17.77■□□□□ 0.44
CCDC188-202ENST00000444532 MVB12AQ96EY5 273 aa17.77■□□□□ 0.44
CCDC188-202ENST00000444532 CABS1Q96KC9 395 aa17.77■□□□□ 0.44
CCDC188-202ENST00000444532 DERL2Q9GZP9 239 aa17.77■□□□□ 0.44
CCDC188-202ENST00000444532 ING2Q9H160 280 aa17.77■□□□□ 0.44
CCDC188-202ENST00000444532 ZNF304Q9HCX3 659 aa17.77■□□□□ 0.44
CCDC188-202ENST00000444532 CTNNAL1Q9UBT7 734 aa17.77■□□□□ 0.44
CCDC188-202ENST00000444532 DMGDHQ9UI17 866 aaKnown RBP17.77■□□□□ 0.44
CCDC188-202ENST00000444532 TLK1Q9UKI8 766 aa17.77■□□□□ 0.44
CCDC188-202ENST00000444532 CDC14AQ9UNH5 594 aa17.77■□□□□ 0.44
CCDC188-202ENST00000444532 OARD1Q9Y530 152 aa17.77■□□□□ 0.44
CCDC188-202ENST00000444532 MED26O95402 600 aa17.76■□□□□ 0.43
CCDC188-202ENST00000444532 ANXA5P08758 320 aa17.76■□□□□ 0.43
CCDC188-202ENST00000444532 ATXN8OSP0DMR3 200 aa17.76■□□□□ 0.43
CCDC188-202ENST00000444532 STMN1P16949 149 aa17.76■□□□□ 0.43
CCDC188-202ENST00000444532 OTX2P32243 289 aa17.76■□□□□ 0.43
CCDC188-202ENST00000444532 OR1D4P47884 311 aa17.76■□□□□ 0.43
CCDC188-202ENST00000444532 RRADP55042 308 aa17.76■□□□□ 0.43
CCDC188-202ENST00000444532 CSNK1G2P78368 415 aa17.76■□□□□ 0.43
CCDC188-202ENST00000444532 TCTN3Q6NUS6 607 aa17.76■□□□□ 0.43
CCDC188-202ENST00000444532 COX15Q7KZN9 410 aa17.76■□□□□ 0.43
CCDC188-202ENST00000444532 ADAMTSL2Q86TH1 951 aa17.76■□□□□ 0.43
CCDC188-202ENST00000444532 RELL1Q8IUW5 271 aa17.76■□□□□ 0.43
CCDC188-202ENST00000444532 TMEM102Q8N9M5 508 aaPredicted RBP17.76■□□□□ 0.43
CCDC188-202ENST00000444532 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.76■□□□□ 0.43
CCDC188-202ENST00000444532 PYCR2Q96C36 320 aa17.76■□□□□ 0.43
CCDC188-202ENST00000444532 C10orf90Q96M02 699 aa17.76■□□□□ 0.43
CCDC188-202ENST00000444532 SYNPO2LQ9H987 977 aa17.76■□□□□ 0.43
CCDC188-202ENST00000444532 CAB39LQ9H9S4 337 aa17.76■□□□□ 0.43
CCDC188-202ENST00000444532 ACSS2Q9NR19 701 aa17.76■□□□□ 0.43
CCDC188-202ENST00000444532 NXT1Q9UKK6 140 aaKnown RBP17.76■□□□□ 0.43
CCDC188-202ENST00000444532 RUVBL1Q9Y265 456 aaKnown RBP17.76■□□□□ 0.43
CCDC188-202ENST00000444532 HEMK1Q9Y5R4 338 aaPredicted RBP17.76■□□□□ 0.43
CCDC188-202ENST00000444532 BOD1L1Q8NFC6 3051 aa17.76■□□□□ 0.43
CCDC188-202ENST00000444532 NPEPPSL1A6NEC2 478 aa17.75■□□□□ 0.43
CCDC188-202ENST00000444532 ARGFXA6NJG6 315 aa17.75■□□□□ 0.43
CCDC188-202ENST00000444532 PRPF4O43172 522 aaKnown RBP eCLIP17.75■□□□□ 0.43
CCDC188-202ENST00000444532 IGHEP01854 428 aa17.75■□□□□ 0.43
CCDC188-202ENST00000444532 CCDC166P0CW27 439 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms