RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 RING1Q06587 406 aa10.93□□□□□ -0.66
FN1-211ENST00000443816 TARDBPQ13148 414 aaKnown RBP eCLIP10.93□□□□□ -0.66
FN1-211ENST00000443816 SH3PXD2AQ5TCZ1 1133 aa10.93□□□□□ -0.66
FN1-211ENST00000443816 NCBP2-AS2Q69YL0 99 aa10.93□□□□□ -0.66
FN1-211ENST00000443816 PAQR3Q6TCH7 311 aa10.93□□□□□ -0.66
FN1-211ENST00000443816 GEMIN6Q8WXD5 167 aaKnown RBP10.93□□□□□ -0.66
FN1-211ENST00000443816 WDR55Q9H6Y2 383 aaPredicted RBP10.93□□□□□ -0.66
FN1-211ENST00000443816 PRODH2Q9UF12 536 aa10.93□□□□□ -0.66
FN1-211ENST00000443816 TTLL8A6PVC2 850 aa10.93□□□□□ -0.66
FN1-211ENST00000443816 CHP2O43745 196 aa10.93□□□□□ -0.66
FN1-211ENST00000443816 RLN1P04808 185 aa10.93□□□□□ -0.66
FN1-211ENST00000443816 MAP3K8P41279 467 aa10.93□□□□□ -0.66
FN1-211ENST00000443816 CBFBQ13951 182 aa10.93□□□□□ -0.66
FN1-211ENST00000443816 KIAA1161Q6NSJ0 714 aa10.93□□□□□ -0.66
FN1-211ENST00000443816 HORMAD2Q8N7B1 307 aa10.93□□□□□ -0.66
FN1-211ENST00000443816 GTPBP3Q969Y2 492 aaKnown RBP10.93□□□□□ -0.66
FN1-211ENST00000443816 BHLHE41Q9C0J9 482 aaPredicted RBP10.93□□□□□ -0.66
FN1-211ENST00000443816 SSU72Q9NP77 194 aaKnown RBP10.93□□□□□ -0.66
FN1-211ENST00000443816 C14orf105Q9NVL8 296 aa10.93□□□□□ -0.66
FN1-211ENST00000443816 EDF1O60869 148 aaKnown RBP10.93□□□□□ -0.66
FN1-211ENST00000443816 LILRB3O75022 631 aa10.93□□□□□ -0.66
FN1-211ENST00000443816 DSTNP60981 165 aa10.93□□□□□ -0.66
FN1-211ENST00000443816 PAFAH1B3Q15102 231 aaKnown RBP10.93□□□□□ -0.66
FN1-211ENST00000443816 ZDHHC21Q8IVQ6 265 aa10.93□□□□□ -0.66
FN1-211ENST00000443816 PROKR2Q8NFJ6 384 aa10.93□□□□□ -0.66
FN1-211ENST00000443816 NKD1Q969G9 470 aa10.93□□□□□ -0.66
FN1-211ENST00000443816 HERC2P3Q9BVR0 1158 aa10.93□□□□□ -0.66
FN1-211ENST00000443816 MVB12BQ9H7P6 319 aa10.93□□□□□ -0.66
FN1-211ENST00000443816 EPOP01588 193 aa10.93□□□□□ -0.66
FN1-211ENST00000443816 DNAJB1P25685 340 aa10.93□□□□□ -0.66
FN1-211ENST00000443816 HNF1BP35680 557 aa10.93□□□□□ -0.66
FN1-211ENST00000443816 NR1H2P55055 460 aa10.93□□□□□ -0.66
FN1-211ENST00000443816 FOLH1Q04609 750 aa10.93□□□□□ -0.66
FN1-211ENST00000443816 INCA1Q0VD86 236 aa10.93□□□□□ -0.66
FN1-211ENST00000443816 FBXO43Q4G163 708 aa10.93□□□□□ -0.66
FN1-211ENST00000443816 PAOXQ6QHF9 649 aa10.93□□□□□ -0.66
FN1-211ENST00000443816 LRRC69Q6ZNQ3 347 aa10.93□□□□□ -0.66
FN1-211ENST00000443816 YTHDF3Q7Z739 585 aaKnown RBP10.93□□□□□ -0.66
FN1-211ENST00000443816 PQLC1Q8N2U9 271 aa10.93□□□□□ -0.66
FN1-211ENST00000443816 LPGAT1Q92604 370 aa10.93□□□□□ -0.66
FN1-211ENST00000443816 HBEGFQ99075 208 aa10.93□□□□□ -0.66
FN1-211ENST00000443816 C16orf70Q9BSU1 422 aa10.93□□□□□ -0.66
FN1-211ENST00000443816 WDR12Q9GZL7 423 aaKnown RBP10.93□□□□□ -0.66
FN1-211ENST00000443816 WRAP73Q9P2S5 460 aaPredicted RBP10.93□□□□□ -0.66
FN1-211ENST00000443816 A0A1W2PP55 124 aa10.93□□□□□ -0.66
FN1-211ENST00000443816 SEMA3DO95025 777 aa10.93□□□□□ -0.66
FN1-211ENST00000443816 GSTT2BP0CG30 244 aa10.93□□□□□ -0.66
FN1-211ENST00000443816 NOXRED1Q6NXP6 359 aa10.93□□□□□ -0.66
FN1-211ENST00000443816 OLFML1Q6UWY5 402 aa10.93□□□□□ -0.66
FN1-211ENST00000443816 SLC13A3Q8WWT9 602 aa10.93□□□□□ -0.66
FN1-211ENST00000443816 MOAP1Q96BY2 351 aa10.93□□□□□ -0.66
FN1-211ENST00000443816 G6PC3Q9BUM1 346 aa10.93□□□□□ -0.66
FN1-211ENST00000443816 C11orf16Q9NQ32 467 aa10.93□□□□□ -0.66
FN1-211ENST00000443816 CXCR6O00574 342 aa10.92□□□□□ -0.66
FN1-211ENST00000443816 IMPDH1P20839 514 aa10.92□□□□□ -0.66
FN1-211ENST00000443816 EIF4HQ15056 248 aaKnown RBP10.92□□□□□ -0.66
FN1-211ENST00000443816 GPRC6AQ5T6X5 926 aa10.92□□□□□ -0.66
FN1-211ENST00000443816 RTL10Q7L3V2 364 aa10.92□□□□□ -0.66
FN1-211ENST00000443816 PHOSPHO2Q8TCD6 241 aa10.92□□□□□ -0.66
FN1-211ENST00000443816 PHOSPHO1Q8TCT1 267 aa10.92□□□□□ -0.66
FN1-211ENST00000443816 CHCHD6Q9BRQ6 235 aa10.92□□□□□ -0.66
FN1-211ENST00000443816 CDH12P55289 794 aa10.92□□□□□ -0.66
FN1-211ENST00000443816 ZSCAN4Q8NAM6 433 aaPredicted RBP10.92□□□□□ -0.66
FN1-211ENST00000443816 FEM1AQ9BSK4 669 aa10.92□□□□□ -0.66
FN1-211ENST00000443816 SEC61A2Q9H9S3 476 aa10.92□□□□□ -0.66
FN1-211ENST00000443816 C15orf41Q9Y2V0 281 aa10.92□□□□□ -0.66
FN1-211ENST00000443816 MATN2O00339 956 aa10.92□□□□□ -0.66
FN1-211ENST00000443816 PRAMEF11O60813 436 aa10.92□□□□□ -0.66
FN1-211ENST00000443816 RNGTTO60942 597 aaKnown RBP10.92□□□□□ -0.66
FN1-211ENST00000443816 PLP2Q04941 152 aa10.92□□□□□ -0.66
FN1-211ENST00000443816 GRHL3Q8TE85 626 aa10.92□□□□□ -0.66
FN1-211ENST00000443816 TESCQ96BS2 214 aa10.92□□□□□ -0.66
FN1-211ENST00000443816 PIRO00625 290 aa10.92□□□□□ -0.66
FN1-211ENST00000443816 LDB2O43679 373 aa10.92□□□□□ -0.66
FN1-211ENST00000443816 PTDSS1P48651 473 aaKnown RBP10.92□□□□□ -0.66
FN1-211ENST00000443816 EIF2B2P49770 351 aaKnown RBP10.92□□□□□ -0.66
FN1-211ENST00000443816 RPS6KA3P51812 740 aa10.92□□□□□ -0.66
FN1-211ENST00000443816 LRIF1Q5T3J3 769 aa10.92□□□□□ -0.66
FN1-211ENST00000443816 TREML1Q86YW5 311 aa10.92□□□□□ -0.66
FN1-211ENST00000443816 ZNF781Q8N8C0 355 aa10.92□□□□□ -0.66
FN1-211ENST00000443816 PELOQ9BRX2 385 aaKnown RBP10.92□□□□□ -0.66
FN1-211ENST00000443816 RSL24D1Q9UHA3 163 aaKnown RBP10.92□□□□□ -0.66
FN1-211ENST00000443816 HCN2Q9UL51 889 aa10.92□□□□□ -0.66
FN1-211ENST00000443816 C4AP0C0L4 1744 aa10.92□□□□□ -0.66
FN1-211ENST00000443816 TJP1Q07157 1748 aa10.92□□□□□ -0.66
FN1-211ENST00000443816 TRIM64A6NGJ6 449 aa10.92□□□□□ -0.66
FN1-211ENST00000443816 H0YJX3 145 aa10.92□□□□□ -0.66
FN1-211ENST00000443816 FADS2O95864 444 aaKnown RBP10.92□□□□□ -0.66
FN1-211ENST00000443816 MATN1P21941 496 aa10.92□□□□□ -0.66
FN1-211ENST00000443816 ITGA3P26006 1051 aa10.92□□□□□ -0.66
FN1-211ENST00000443816 BMP8BP34820 402 aa10.92□□□□□ -0.66
FN1-211ENST00000443816 CLRN1P58418 232 aa10.92□□□□□ -0.66
FN1-211ENST00000443816 PITPNAQ00169 270 aa10.92□□□□□ -0.66
FN1-211ENST00000443816 RUNX3Q13761 415 aa10.92□□□□□ -0.66
FN1-211ENST00000443816 RGS21Q2M5E4 152 aa10.92□□□□□ -0.66
FN1-211ENST00000443816 BMP8AQ7Z5Y6 402 aa10.92□□□□□ -0.66
FN1-211ENST00000443816 ZDHHC14Q8IZN3 488 aa10.92□□□□□ -0.66
FN1-211ENST00000443816 NR4A3Q92570 626 aa10.92□□□□□ -0.66
FN1-211ENST00000443816 UFD1Q92890 307 aa10.92□□□□□ -0.66
FN1-211ENST00000443816 ORAI3Q9BRQ5 295 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms