RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 GSPT2Q8IYD1 628 aaKnown RBP14.39□□□□□ -0.11
CSNK1E-210ENST00000442216 CENPLQ8N0S6 344 aaPredicted RBP14.39□□□□□ -0.11
CSNK1E-210ENST00000442216 ZNF655Q8N720 491 aaPredicted RBP14.39□□□□□ -0.11
CSNK1E-210ENST00000442216 ABHD11Q8NFV4 315 aa14.39□□□□□ -0.11
CSNK1E-210ENST00000442216 PYCR2Q96C36 320 aa14.39□□□□□ -0.11
CSNK1E-210ENST00000442216 MTBPQ96DY7 904 aa14.39□□□□□ -0.11
CSNK1E-210ENST00000442216 CABS1Q96KC9 395 aa14.39□□□□□ -0.11
CSNK1E-210ENST00000442216 PRAP1Q96NZ9 151 aa14.39□□□□□ -0.11
CSNK1E-210ENST00000442216 OR2A5Q96R48 311 aa14.39□□□□□ -0.11
CSNK1E-210ENST00000442216 C17orf62Q9BQA9 187 aa14.39□□□□□ -0.11
CSNK1E-210ENST00000442216 SARGQ9BW04 601 aa14.39□□□□□ -0.11
CSNK1E-210ENST00000442216 EPB41L4BQ9H329 900 aa14.39□□□□□ -0.11
CSNK1E-210ENST00000442216 CNOT10Q9H9A5 744 aaKnown RBP14.39□□□□□ -0.11
CSNK1E-210ENST00000442216 PPCSQ9HAB8 311 aa14.39□□□□□ -0.11
CSNK1E-210ENST00000442216 CPNE5Q9HCH3 593 aa14.39□□□□□ -0.11
CSNK1E-210ENST00000442216 TXLNGQ9NUQ3 528 aa14.39□□□□□ -0.11
CSNK1E-210ENST00000442216 WDR70Q9NW82 654 aa14.39□□□□□ -0.11
CSNK1E-210ENST00000442216 CUEDC1Q9NWM3 386 aaPredicted RBP14.39□□□□□ -0.11
CSNK1E-210ENST00000442216 IRAK4Q9NWZ3 460 aa14.39□□□□□ -0.11
CSNK1E-210ENST00000442216 CROTQ9UKG9 612 aa14.39□□□□□ -0.11
CSNK1E-210ENST00000442216 RNF112Q9ULX5 631 aa14.39□□□□□ -0.11
CSNK1E-210ENST00000442216 PCDHGA4Q9Y5G9 962 aa14.39□□□□□ -0.11
CSNK1E-210ENST00000442216 SYCE1LA8MT33 242 aa14.38□□□□□ -0.11
CSNK1E-210ENST00000442216 ZNF891A8MT65 544 aaPredicted RBP14.38□□□□□ -0.11
CSNK1E-210ENST00000442216 NRP2O60462 931 aa14.38□□□□□ -0.11
CSNK1E-210ENST00000442216 KERAO60938 352 aa14.38□□□□□ -0.11
CSNK1E-210ENST00000442216 CD63P08962 238 aa14.38□□□□□ -0.11
CSNK1E-210ENST00000442216 TFEBP19484 476 aa14.38□□□□□ -0.11
CSNK1E-210ENST00000442216 GCAP28676 217 aa14.38□□□□□ -0.11
CSNK1E-210ENST00000442216 GRK3P35626 688 aa14.38□□□□□ -0.11
CSNK1E-210ENST00000442216 SLC6A12P48065 614 aa14.38□□□□□ -0.11
CSNK1E-210ENST00000442216 VSX2P58304 361 aaPredicted RBP14.38□□□□□ -0.11
CSNK1E-210ENST00000442216 CSNK1G2P78368 415 aa14.38□□□□□ -0.11
CSNK1E-210ENST00000442216 SRSF6Q13247 344 aaKnown RBP14.38□□□□□ -0.11
CSNK1E-210ENST00000442216 DNASE1L3Q13609 305 aa14.38□□□□□ -0.11
CSNK1E-210ENST00000442216 WASHC2DQ5SRD0 308 aa14.38□□□□□ -0.11
CSNK1E-210ENST00000442216 FRMPD2BQ6IN97 320 aa14.38□□□□□ -0.11
CSNK1E-210ENST00000442216 KLC3Q6P597 504 aa14.38□□□□□ -0.11
CSNK1E-210ENST00000442216 TIFABQ6ZNK6 161 aa14.38□□□□□ -0.11
CSNK1E-210ENST00000442216 ADCK2Q7Z695 626 aa14.38□□□□□ -0.11
CSNK1E-210ENST00000442216 THOC6Q86W42 341 aaKnown RBP14.38□□□□□ -0.11
CSNK1E-210ENST00000442216 OR4K1Q8NGD4 311 aa14.38□□□□□ -0.11
CSNK1E-210ENST00000442216 CT55Q8WUE5 264 aa14.38□□□□□ -0.11
CSNK1E-210ENST00000442216 MR1Q95460 341 aa14.38□□□□□ -0.11
CSNK1E-210ENST00000442216 RERGQ96A58 199 aaPredicted RBP14.38□□□□□ -0.11
CSNK1E-210ENST00000442216 ALKBH8Q96BT7 664 aaKnown RBP14.38□□□□□ -0.11
CSNK1E-210ENST00000442216 NXNL1Q96CM4 212 aa14.38□□□□□ -0.11
CSNK1E-210ENST00000442216 GBP5Q96PP8 586 aa14.38□□□□□ -0.11
CSNK1E-210ENST00000442216 OR4K3Q96R72 315 aa14.38□□□□□ -0.11
CSNK1E-210ENST00000442216 ATOH8Q96SQ7 321 aa14.38□□□□□ -0.11
CSNK1E-210ENST00000442216 CAPS2Q9BXY5 557 aa14.38□□□□□ -0.11
CSNK1E-210ENST00000442216 UNKQ9C0B0 810 aaKnown RBP14.38□□□□□ -0.11
CSNK1E-210ENST00000442216 ALG9Q9H6U8 611 aa14.38□□□□□ -0.11
CSNK1E-210ENST00000442216 NUDT4Q9NZJ9 180 aa14.38□□□□□ -0.11
CSNK1E-210ENST00000442216 PTBP2Q9UKA9 531 aaKnown RBP14.38□□□□□ -0.11
CSNK1E-210ENST00000442216 DYRK1BQ9Y463 629 aa14.38□□□□□ -0.11
CSNK1E-210ENST00000442216 KCNE2Q9Y6J6 123 aa14.38□□□□□ -0.11
CSNK1E-210ENST00000442216 LOC105369274A0A096LPK9 316 aa14.37□□□□□ -0.11
CSNK1E-210ENST00000442216 LOC102723532A0A0G2JNH3 316 aa14.37□□□□□ -0.11
CSNK1E-210ENST00000442216 IQANK1A0A1B0GTG1 560 aa14.37□□□□□ -0.11
CSNK1E-210ENST00000442216 A0A1B0GX78 115 aa14.37□□□□□ -0.11
CSNK1E-210ENST00000442216 TRIM49D1C9J1S8 452 aa14.37□□□□□ -0.11
CSNK1E-210ENST00000442216 H0YGG7 62 aa14.37□□□□□ -0.11
CSNK1E-210ENST00000442216 HAT1O14929 419 aa14.37□□□□□ -0.11
CSNK1E-210ENST00000442216 DSCR3O14972 297 aa14.37□□□□□ -0.11
CSNK1E-210ENST00000442216 ONECUT2O95948 504 aa14.37□□□□□ -0.11
CSNK1E-210ENST00000442216 S100BP04271 92 aaPredicted RBP14.37□□□□□ -0.11
CSNK1E-210ENST00000442216 CTSBP07858 339 aa14.37□□□□□ -0.11
CSNK1E-210ENST00000442216 CDH1P12830 882 aa14.37□□□□□ -0.11
CSNK1E-210ENST00000442216 CCR8P51685 355 aa14.37□□□□□ -0.11
CSNK1E-210ENST00000442216 ARF3P61204 181 aaPredicted RBP14.37□□□□□ -0.11
CSNK1E-210ENST00000442216 VSNL1P62760 191 aa14.37□□□□□ -0.11
CSNK1E-210ENST00000442216 RPS15P62841 145 aaKnown RBP14.37□□□□□ -0.11
CSNK1E-210ENST00000442216 DCDP81605 110 aaKnown RBP14.37□□□□□ -0.11
CSNK1E-210ENST00000442216 TSNAXIP1Q2TAA8 658 aa14.37□□□□□ -0.11
CSNK1E-210ENST00000442216 PRTGQ2VWP7 1150 aa14.37□□□□□ -0.11
CSNK1E-210ENST00000442216 ARHGAP40Q5TG30 622 aa14.37□□□□□ -0.11
CSNK1E-210ENST00000442216 GARNL3Q5VVW2 1013 aa14.37□□□□□ -0.11
CSNK1E-210ENST00000442216 OR4N4Q8N0Y3 316 aa14.37□□□□□ -0.11
CSNK1E-210ENST00000442216 TBC1D19Q8N5T2 526 aa14.37□□□□□ -0.11
CSNK1E-210ENST00000442216 KCTD4Q8WVF5 259 aa14.37□□□□□ -0.11
CSNK1E-210ENST00000442216 UBLCP1Q8WVY7 318 aaPredicted RBP14.37□□□□□ -0.11
CSNK1E-210ENST00000442216 SLC5A11Q8WWX8 675 aa14.37□□□□□ -0.11
CSNK1E-210ENST00000442216 NLNQ9BYT8 704 aa14.37□□□□□ -0.11
CSNK1E-210ENST00000442216 VPS11Q9H270 941 aa14.37□□□□□ -0.11
CSNK1E-210ENST00000442216 CHST8Q9H2A9 424 aa14.37□□□□□ -0.11
CSNK1E-210ENST00000442216 AKIRIN1Q9H9L7 192 aaPredicted RBP14.37□□□□□ -0.11
CSNK1E-210ENST00000442216 PELI2Q9HAT8 420 aa14.37□□□□□ -0.11
CSNK1E-210ENST00000442216 CUTCQ9NTM9 273 aa14.37□□□□□ -0.11
CSNK1E-210ENST00000442216 WWOXQ9NZC7 414 aa14.37□□□□□ -0.11
CSNK1E-210ENST00000442216 GPRC5BQ9NZH0 403 aa14.37□□□□□ -0.11
CSNK1E-210ENST00000442216 CD274Q9NZQ7 290 aa14.37□□□□□ -0.11
CSNK1E-210ENST00000442216 PSMC3IPQ9P2W1 217 aaPredicted RBP14.37□□□□□ -0.11
CSNK1E-210ENST00000442216 LHX6Q9UPM6 363 aa14.37□□□□□ -0.11
CSNK1E-210ENST00000442216 SH2B3Q9UQQ2 575 aa14.37□□□□□ -0.11
CSNK1E-210ENST00000442216 SLC22A14Q9Y267 594 aa14.37□□□□□ -0.11
CSNK1E-210ENST00000442216 HYKKA2RU49 373 aa14.36□□□□□ -0.11
CSNK1E-210ENST00000442216 NCF1BA6NI72 391 aaPredicted RBP14.36□□□□□ -0.11
CSNK1E-210ENST00000442216 NCF1CA8MVU1 366 aaPredicted RBP14.36□□□□□ -0.11
CSNK1E-210ENST00000442216 C9J4A7 227 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms