RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 FOSL2P15408 326 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 NPPBP16860 134 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 PSMA4P25789 261 aaKnown RBP5.82□□□□□ -1.48
VPS50-205ENST00000441602 HTR1EP28566 365 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 HSPA13P48723 471 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 LIPEQ05469 1076 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 E2F2Q14209 437 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 RETREG3Q86VR2 466 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 SLC15A3Q8IY34 581 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 PQLC1Q8N2U9 271 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 C1orf52Q8N6N3 182 aaKnown RBP5.82□□□□□ -1.48
VPS50-205ENST00000441602 EFCAB3Q8N7B9 438 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 WDR20Q8TBZ3 569 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 NEIL2Q969S2 332 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 FAM120BQ96EK7 910 aaKnown RBP5.82□□□□□ -1.48
VPS50-205ENST00000441602 SCARF2Q96GP6 870 aaPredicted RBP5.82□□□□□ -1.48
VPS50-205ENST00000441602 NSMCE2Q96MF7 247 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 INSM2Q96T92 566 aaPredicted RBP5.82□□□□□ -1.48
VPS50-205ENST00000441602 THUMPD3Q9BV44 507 aaKnown RBP5.82□□□□□ -1.48
VPS50-205ENST00000441602 LGR4Q9BXB1 951 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 SLC6A17Q9H1V8 727 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 LMAN1LQ9HAT1 526 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 TRNAU1APQ9NX07 287 aaKnown RBP5.82□□□□□ -1.48
VPS50-205ENST00000441602 ACTR3BQ9P1U1 418 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 NKX1-2Q9UD57 310 aaPredicted RBP5.82□□□□□ -1.48
VPS50-205ENST00000441602 SLC23A2Q9UGH3 650 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 TAC3Q9UHF0 121 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 DUSP12Q9UNI6 340 aa5.82□□□□□ -1.48
VPS50-205ENST00000441602 TICRRQ7Z2Z1 1910 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 PCDH7O60245 1069 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 FKBP9O95302 570 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 ERGP11308 486 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 SDC1P18827 310 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 SLC6A2P23975 617 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 PKLRP30613 574 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 GSK3BP49841 420 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 RPS13P62277 151 aaKnown RBP5.81□□□□□ -1.48
VPS50-205ENST00000441602 PPP2CBP62714 309 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 PPP2CAP67775 309 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 MRPS22P82650 360 aaKnown RBP5.81□□□□□ -1.48
VPS50-205ENST00000441602 REEP5Q00765 189 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 CCINQ13939 588 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 CAPRIN1Q14444 709 aaKnown RBP5.81□□□□□ -1.48
VPS50-205ENST00000441602 TLR1Q15399 786 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 TRIP10Q15642 601 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 CMPK2Q5EBM0 449 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 CPTPQ5TA50 214 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 C8orf82Q6P1X6 216 aaPredicted RBP5.81□□□□□ -1.48
VPS50-205ENST00000441602 SLC2A7Q6PXP3 512 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 IKBIPQ70UQ0 350 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 FKBP9P1Q75LS8 142 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 RD3Q7Z3Z2 195 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 RNF148Q8N7C7 305 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 SRFBP1Q8NEF9 429 aaKnown RBP5.81□□□□□ -1.48
VPS50-205ENST00000441602 HUS1BQ8NHY5 278 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 DNAJB14Q8TBM8 379 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 ZFPM2Q8WW38 1151 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 PYDC1Q8WXC3 89 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 TMEM125Q96AQ2 219 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 MTERF3Q96E29 417 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 FCRL1Q96LA6 429 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 MTERF1Q99551 399 aaKnown RBP5.81□□□□□ -1.48
VPS50-205ENST00000441602 KLHL4Q9C0H6 718 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 ALG2Q9H553 416 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 KIR3DX1Q9H7L2 352 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 FZD3Q9NPG1 666 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 DMRT3Q9NQL9 472 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 GEMIN8Q9NWZ8 242 aaKnown RBP5.81□□□□□ -1.48
VPS50-205ENST00000441602 USP36Q9P275 1121 aaKnown RBP5.81□□□□□ -1.48
VPS50-205ENST00000441602 MAP10Q9P2G4 905 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 CD300AQ9UGN4 299 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 CIDEBQ9UHD4 219 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 SNX7Q9UNH6 387 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 AP4S1Q9Y587 144 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 C9JVG2 144 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 SCELO95171 688 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 EPN2O95208 641 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 IGLV3-19P01714 112 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 C8BP07358 591 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 CD6P30203 668 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 SLC7A1P30825 629 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 ACTR1BP42025 376 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 C21orf58P58505 322 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 ACTR1AP61163 376 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 RHDQ02161 417 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 ZNF763Q0D2J5 394 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 UBXN2BQ14CS0 331 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 RPE65Q16518 533 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 GRAMD1BQ3KR37 738 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 SPANXN4Q5MJ08 99 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 LCN8Q6JVE9 175 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 ERICH5Q6P6B1 374 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 IFNEQ86WN2 208 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 TRIML2Q8N7C3 387 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 FLCNQ8NFG4 579 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 ADCY4Q8NFM4 1077 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 LCN9Q8WX39 176 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 APIPQ96GX9 242 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 IL17FQ96PD4 163 aa5.81□□□□□ -1.48
VPS50-205ENST00000441602 OR4K3Q96R72 315 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms