RNA–Protein interactions for RNA: ENST00000441222.7

USP46-201, Transcript of ubiquitin specific peptidase 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP46, Length 7,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-201ENST00000441222 ZSCAN1Q8NBB4 408 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 OR2T29Q8NH02 315 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 AKT1S1Q96B36 256 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 NUS1Q96E22 293 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 AURKBQ96GD4 344 aaPredicted RBP6.51□□□□□ -1.37
USP46-201ENST00000441222 OSBPL2Q9H1P3 480 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 SEC61A2Q9H9S3 476 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 PNO1Q9NRX1 252 aaKnown RBP6.51□□□□□ -1.37
USP46-201ENST00000441222 ZFP37Q9Y6Q3 630 aaPredicted RBP6.51□□□□□ -1.37
USP46-201ENST00000441222 C2orf71A6NGG8 1288 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 SEPT4O43236 478 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 LRCH4O75427 683 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 OR4F21O95013 312 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 VNN2O95498 520 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 SCGB1D2O95969 90 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 ERCC1P07992 297 aaPredicted RBP6.51□□□□□ -1.37
USP46-201ENST00000441222 HTR1AP08908 422 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 VAMP1P23763 118 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 PLA2G16P53816 162 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 HADHBP55084 474 aaKnown RBP6.51□□□□□ -1.37
USP46-201ENST00000441222 FAM110CQ1W6H9 321 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 ZBED5Q49AG3 693 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 SHQ1Q6PI26 577 aaKnown RBP6.51□□□□□ -1.37
USP46-201ENST00000441222 ARL9Q6T311 187 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 ZNF550Q7Z398 422 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 NPAS4Q8IUM7 802 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 TMEM156Q8N614 296 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 LRRC58Q96CX6 371 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 KLHL15Q96M94 604 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 HNRNPABQ99729 332 aaKnown RBP6.51□□□□□ -1.37
USP46-201ENST00000441222 IL36AQ9UHA7 158 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 EIF2B4Q9UI10 523 aaKnown RBP6.51□□□□□ -1.37
USP46-201ENST00000441222 TLR6Q9Y2C9 796 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 MAB21L2Q9Y586 359 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 PCDHB3Q9Y5E6 796 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 EVPLQ92817 2033 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 ADM5C9JUS6 153 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 H7C417 338 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 MT-ND5P03915 603 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 C4BPAP04003 597 aaKnown RBP6.51□□□□□ -1.37
USP46-201ENST00000441222 PRAMEF14Q5SWL7 426 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 PRAMEF13Q5VWM6 474 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 NCEH1Q6PIU2 408 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 LRRTM4Q86VH4 590 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 LRTOMTQ8WZ04 291 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 ASB9Q96DX5 294 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 HMCESQ96FZ2 354 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 DCSTAMPQ9H295 470 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 MS4A12Q9NXJ0 267 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 SERTAD3Q9UJW9 196 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 PTBP2Q9UKA9 531 aaKnown RBP6.51□□□□□ -1.37
USP46-201ENST00000441222 SLC7A11Q9UPY5 501 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 REXO2Q9Y3B8 237 aaKnown RBP6.51□□□□□ -1.37
USP46-201ENST00000441222 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.51□□□□□ -1.37
USP46-201ENST00000441222 SLC31A1O15431 190 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 VEGFDO43915 354 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 TPST2O60704 377 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 MATN1P21941 496 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 GSTM2P28161 218 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 SLC6A6P31641 620 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 ZNF41P51814 821 aaPredicted RBP6.51□□□□□ -1.37
USP46-201ENST00000441222 OGFOD2Q6N063 350 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 GPR153Q6NV75 609 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 RGMBQ6NW40 437 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 OTOP3Q7RTS5 596 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 KCNK18Q7Z418 384 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 SHKBP1Q8TBC3 707 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 POF1BQ8WVV4 589 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 FCAMRQ8WWV6 532 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 RDH12Q96NR8 316 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 SDCBP2Q9H190 292 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 COQ10BQ9H8M1 238 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 EPHB6O15197 1021 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 HOXA10P31260 410 aaPredicted RBP6.51□□□□□ -1.37
USP46-201ENST00000441222 DSG2Q14126 1118 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 DSC3Q14574 896 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 EARS2Q5JPH6 523 aaKnown RBP6.51□□□□□ -1.37
USP46-201ENST00000441222 LRRC66Q68CR7 880 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 ABHD15Q6UXT9 468 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 ZNF781Q8N8C0 355 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 STON2Q8WXE9 905 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 SLC30A2Q9BRI3 323 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 ACTR6Q9GZN1 396 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 BRF2Q9HAW0 419 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 POMPQ9Y244 141 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 WDR37Q9Y2I8 494 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 IFNA10P01566 189 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 SOX9P48436 509 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 DGKGP49619 791 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 DSC2Q02487 901 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 RPL6Q02878 288 aaKnown RBP6.51□□□□□ -1.37
USP46-201ENST00000441222 SEMA3AQ14563 771 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 PRAMEF19Q5SWL8 479 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 ZBTB46Q86UZ6 589 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 CENPSQ8N2Z9 138 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 CLIP4Q8N3C7 705 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 OR5J2Q8NH18 312 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 DQX1Q8TE96 717 aaKnown RBP6.51□□□□□ -1.37
USP46-201ENST00000441222 COL21A1Q96P44 957 aa6.51□□□□□ -1.37
USP46-201ENST00000441222 RBP7Q96R05 134 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms