RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 ANPEPP15144 967 aa5.82□□□□□ -1.48
PTPRR-204ENST00000440835 TYRP1P17643 537 aa5.82□□□□□ -1.48
PTPRR-204ENST00000440835 AGXTP21549 392 aa5.82□□□□□ -1.48
PTPRR-204ENST00000440835 KCNJ1P48048 391 aa5.82□□□□□ -1.48
PTPRR-204ENST00000440835 RELAQ04206 551 aa5.82□□□□□ -1.48
PTPRR-204ENST00000440835 SLC10A2Q12908 348 aaPredicted RBP5.82□□□□□ -1.48
PTPRR-204ENST00000440835 YOD1Q5VVQ6 348 aaPredicted RBP5.82□□□□□ -1.48
PTPRR-204ENST00000440835 TTC27Q6P3X3 843 aa5.82□□□□□ -1.48
PTPRR-204ENST00000440835 CRTC3Q6UUV7 619 aa5.82□□□□□ -1.48
PTPRR-204ENST00000440835 RAPH1Q70E73 1250 aa5.82□□□□□ -1.48
PTPRR-204ENST00000440835 CLNKQ7Z7G1 428 aa5.82□□□□□ -1.48
PTPRR-204ENST00000440835 MTDHQ86UE4 582 aaKnown RBP5.82□□□□□ -1.48
PTPRR-204ENST00000440835 TMEM126BQ8IUX1 230 aa5.82□□□□□ -1.48
PTPRR-204ENST00000440835 UNC5BQ8IZJ1 945 aa5.82□□□□□ -1.48
PTPRR-204ENST00000440835 ACTL9Q8TC94 416 aa5.82□□□□□ -1.48
PTPRR-204ENST00000440835 HM13Q8TCT9 377 aa5.82□□□□□ -1.48
PTPRR-204ENST00000440835 TFB1MQ8WVM0 346 aaKnown RBP5.82□□□□□ -1.48
PTPRR-204ENST00000440835 ATG4AQ8WYN0 398 aa5.82□□□□□ -1.48
PTPRR-204ENST00000440835 RSC1A1Q92681 617 aa5.82□□□□□ -1.48
PTPRR-204ENST00000440835 STMN2Q93045 179 aa5.82□□□□□ -1.48
PTPRR-204ENST00000440835 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.82□□□□□ -1.48
PTPRR-204ENST00000440835 EID2BQ96D98 161 aa5.82□□□□□ -1.48
PTPRR-204ENST00000440835 PTCD3Q96EY7 689 aaKnown RBP5.82□□□□□ -1.48
PTPRR-204ENST00000440835 BTBD10Q9BSF8 475 aa5.82□□□□□ -1.48
PTPRR-204ENST00000440835 RBM38Q9H0Z9 239 aaKnown RBP5.82□□□□□ -1.48
PTPRR-204ENST00000440835 TFB2MQ9H5Q4 396 aaKnown RBP5.82□□□□□ -1.48
PTPRR-204ENST00000440835 ZFP69BQ9UJL9 534 aa5.82□□□□□ -1.48
PTPRR-204ENST00000440835 SERTAD3Q9UJW9 196 aa5.82□□□□□ -1.48
PTPRR-204ENST00000440835 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.82□□□□□ -1.48
PTPRR-204ENST00000440835 PCM1Q15154 2024 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 IGHV5-51A0A0C4DH38 117 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 GLYATL1P3A0A0U1RQE8 302 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 AGAP14A8MT82 685 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 E9PBE3 544 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 CASQ2O14958 399 aaPredicted RBP5.81□□□□□ -1.48
PTPRR-204ENST00000440835 POP7O75817 140 aaKnown RBP5.81□□□□□ -1.48
PTPRR-204ENST00000440835 TFAP2AP05549 437 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 SLC35G4P0C7Q5 338 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 MSH3P20585 1137 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 RORAP35398 523 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 SEPHS1P49903 392 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 SERPINB8P50452 374 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 GEMP55040 296 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 PER3P56645 1201 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 MSLNQ13421 630 aaPredicted RBP5.81□□□□□ -1.48
PTPRR-204ENST00000440835 GALNT3Q14435 633 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 MORF4L2Q15014 288 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 NOMO1Q15155 1222 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 LLGL1Q15334 1064 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 TAF1AQ15573 450 aaPredicted RBP5.81□□□□□ -1.48
PTPRR-204ENST00000440835 GPR33Q49SQ1 333 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 NXNQ6DKJ4 435 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 FCRL6Q6DN72 434 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 ITPRIPL1Q6GPH6 555 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 KDELC1Q6UW63 502 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 ISLR2Q6UXK2 745 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 TRMT10CQ7L0Y3 403 aaKnown RBP5.81□□□□□ -1.48
PTPRR-204ENST00000440835 CCDC25Q86WR0 208 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 TICAM1Q8IUC6 712 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 ACVR1CQ8NER5 493 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 SLC35B2Q8TB61 432 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 CCDC77Q9BR77 488 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 ROPN1BQ9BZX4 212 aaPredicted RBP5.81□□□□□ -1.48
PTPRR-204ENST00000440835 ING2Q9H160 280 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 CDC42EP4Q9H3Q1 356 aaKnown RBP5.81□□□□□ -1.48
PTPRR-204ENST00000440835 ROPN1Q9HAT0 212 aaPredicted RBP5.81□□□□□ -1.48
PTPRR-204ENST00000440835 TIMMDC1Q9NPL8 285 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 POMT2Q9UKY4 750 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 SNX7Q9UNH6 387 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 SRPK3Q9UPE1 567 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 FAM32AQ9Y421 112 aaKnown RBP5.81□□□□□ -1.48
PTPRR-204ENST00000440835 MRPS18BQ9Y676 258 aaKnown RBP5.81□□□□□ -1.48
PTPRR-204ENST00000440835 FBP2O00757 339 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 DNALI1O14645 258 aaPredicted RBP5.81□□□□□ -1.48
PTPRR-204ENST00000440835 CCDC22O60826 627 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 TMEM63AO94886 807 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 AP2A2O94973 939 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 OXSR1O95747 527 aaPredicted RBP5.81□□□□□ -1.48
PTPRR-204ENST00000440835 ONECUT2O95948 504 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 FOLR1P15328 257 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 SH3BP2P78314 561 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 SSPNQ14714 243 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 PTPRRQ15256 657 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 INPP5JQ15735 1006 aaPredicted RBP5.81□□□□□ -1.48
PTPRR-204ENST00000440835 ATP13A5Q4VNC0 1218 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 SFT2D3Q587I9 215 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 JMJD6Q6NYC1 403 aaPredicted RBP5.81□□□□□ -1.48
PTPRR-204ENST00000440835 TMEM220Q6QAJ8 160 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 FAM92BQ6ZTR7 304 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 NLRP9Q7RTR0 991 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 MAMDC2Q7Z304 686 aaPredicted RBP5.81□□□□□ -1.48
PTPRR-204ENST00000440835 SRRM1Q8IYB3 904 aaKnown RBP5.81□□□□□ -1.48
PTPRR-204ENST00000440835 LILRB1Q8NHL6 650 aaPredicted RBP5.81□□□□□ -1.48
PTPRR-204ENST00000440835 ZFP28Q8NHY6 868 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 MR1Q95460 341 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 SERPINB12Q96P63 405 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 RUBCNLQ9H714 662 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 IL26Q9NPH9 171 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 HRASLS2Q9NWW9 162 aa5.81□□□□□ -1.48
PTPRR-204ENST00000440835 GPR83Q9NYM4 423 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms