RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 CFAP46Q8IYW2 2715 aa23.63■■□□□ 1.37
RAPGEF1-206ENST00000438647 TLN1Q9Y490 2541 aaKnown RBP23.62■■□□□ 1.37
RAPGEF1-206ENST00000438647 CXorf49A8MYA2 514 aaPredicted RBP23.62■■□□□ 1.37
RAPGEF1-206ENST00000438647 H7BY64 318 aa23.62■■□□□ 1.37
RAPGEF1-206ENST00000438647 PIAS1O75925 651 aa23.62■■□□□ 1.37
RAPGEF1-206ENST00000438647 ATXN8OSP0DMR3 200 aa23.62■■□□□ 1.37
RAPGEF1-206ENST00000438647 PRTGQ2VWP7 1150 aa23.62■■□□□ 1.37
RAPGEF1-206ENST00000438647 PRMT9Q6P2P2 845 aa23.62■■□□□ 1.37
RAPGEF1-206ENST00000438647 LCTLQ6UWM7 567 aa23.62■■□□□ 1.37
RAPGEF1-206ENST00000438647 TMEM207Q6UWW9 146 aa23.62■■□□□ 1.37
RAPGEF1-206ENST00000438647 CSNK1A1LQ8N752 337 aa23.62■■□□□ 1.37
RAPGEF1-206ENST00000438647 ALKBH8Q96BT7 664 aaKnown RBP23.62■■□□□ 1.37
RAPGEF1-206ENST00000438647 ABHD17AQ96GS6 310 aa23.62■■□□□ 1.37
RAPGEF1-206ENST00000438647 CABS1Q96KC9 395 aa23.62■■□□□ 1.37
RAPGEF1-206ENST00000438647 PRAP1Q96NZ9 151 aa23.62■■□□□ 1.37
RAPGEF1-206ENST00000438647 OR2A5Q96R48 311 aa23.62■■□□□ 1.37
RAPGEF1-206ENST00000438647 RBBP8Q99708 897 aa23.62■■□□□ 1.37
RAPGEF1-206ENST00000438647 HAUS8Q9BT25 410 aa23.62■■□□□ 1.37
RAPGEF1-206ENST00000438647 LRRC4CQ9HCJ2 640 aa23.62■■□□□ 1.37
RAPGEF1-206ENST00000438647 CUEDC1Q9NWM3 386 aaPredicted RBP23.62■■□□□ 1.37
RAPGEF1-206ENST00000438647 MTRF1LQ9UGC7 380 aaKnown RBP23.62■■□□□ 1.37
RAPGEF1-206ENST00000438647 HEATR5BQ9P2D3 2071 aa23.62■■□□□ 1.37
RAPGEF1-206ENST00000438647 NAB1Q13506 487 aa23.61■■□□□ 1.37
RAPGEF1-206ENST00000438647 COL9A2Q14055 689 aaPredicted RBP23.61■■□□□ 1.37
RAPGEF1-206ENST00000438647 ZNF460Q14592 562 aa23.61■■□□□ 1.37
RAPGEF1-206ENST00000438647 USP10Q14694 798 aaKnown RBP23.61■■□□□ 1.37
RAPGEF1-206ENST00000438647 FAM69BQ5VUD6 431 aa23.61■■□□□ 1.37
RAPGEF1-206ENST00000438647 GARNL3Q5VVW2 1013 aa23.61■■□□□ 1.37
RAPGEF1-206ENST00000438647 SBSNQ6UWP8 590 aa23.61■■□□□ 1.37
RAPGEF1-206ENST00000438647 OVCH1Q7RTY7 1134 aa23.61■■□□□ 1.37
RAPGEF1-206ENST00000438647 ADAMTSL2Q86TH1 951 aa23.61■■□□□ 1.37
RAPGEF1-206ENST00000438647 PTERQ96BW5 349 aa23.61■■□□□ 1.37
RAPGEF1-206ENST00000438647 FBXL8Q96CD0 374 aa23.61■■□□□ 1.37
RAPGEF1-206ENST00000438647 MVB12AQ96EY5 273 aa23.61■■□□□ 1.37
RAPGEF1-206ENST00000438647 GPR22Q99680 433 aa23.61■■□□□ 1.37
RAPGEF1-206ENST00000438647 WDR54Q9H977 334 aa23.61■■□□□ 1.37
RAPGEF1-206ENST00000438647 ACSS2Q9NR19 701 aa23.61■■□□□ 1.37
RAPGEF1-206ENST00000438647 SLC22A11Q9NSA0 550 aa23.61■■□□□ 1.37
RAPGEF1-206ENST00000438647 NXT1Q9UKK6 140 aaKnown RBP23.61■■□□□ 1.37
RAPGEF1-206ENST00000438647 MTO1Q9Y2Z2 717 aaKnown RBP23.61■■□□□ 1.37
RAPGEF1-206ENST00000438647 ARGFXA6NJG6 315 aa23.6■■□□□ 1.37
RAPGEF1-206ENST00000438647 HAT1O14929 419 aa23.6■■□□□ 1.37
RAPGEF1-206ENST00000438647 GUCA1CO95843 209 aa23.6■■□□□ 1.37
RAPGEF1-206ENST00000438647 ITGAXP20702 1163 aa23.6■■□□□ 1.37
RAPGEF1-206ENST00000438647 OTX2P32243 289 aa23.6■■□□□ 1.37
RAPGEF1-206ENST00000438647 SPRP35270 261 aaPredicted RBP23.6■■□□□ 1.37
RAPGEF1-206ENST00000438647 GRK3P35626 688 aa23.6■■□□□ 1.37
RAPGEF1-206ENST00000438647 RRADP55042 308 aa23.6■■□□□ 1.37
RAPGEF1-206ENST00000438647 RPS15AP62244 130 aaKnown RBP23.6■■□□□ 1.37
RAPGEF1-206ENST00000438647 KBTBD12Q3ZCT8 623 aa23.6■■□□□ 1.37
RAPGEF1-206ENST00000438647 GLE1Q53GS7 698 aaKnown RBP23.6■■□□□ 1.37
RAPGEF1-206ENST00000438647 GRTP1Q5TC63 336 aa23.6■■□□□ 1.37
RAPGEF1-206ENST00000438647 CEP97Q8IW35 865 aa23.6■■□□□ 1.37
RAPGEF1-206ENST00000438647 TMEM102Q8N9M5 508 aaPredicted RBP23.6■■□□□ 1.37
RAPGEF1-206ENST00000438647 OR56A3Q8NH54 315 aa23.6■■□□□ 1.37
RAPGEF1-206ENST00000438647 TSPYL1Q9H0U9 437 aa23.6■■□□□ 1.37
RAPGEF1-206ENST00000438647 ING2Q9H160 280 aa23.6■■□□□ 1.37
RAPGEF1-206ENST00000438647 SLC26A1Q9H2B4 701 aa23.6■■□□□ 1.37
RAPGEF1-206ENST00000438647 ZDHHC18Q9NUE0 388 aa23.6■■□□□ 1.37
RAPGEF1-206ENST00000438647 CDC14AQ9UNH5 594 aa23.6■■□□□ 1.37
RAPGEF1-206ENST00000438647 FASNP49327 2511 aaKnown RBP23.6■■□□□ 1.37
RAPGEF1-206ENST00000438647 ANKRD12Q6UB98 2062 aa23.6■■□□□ 1.37
RAPGEF1-206ENST00000438647 PRPF4O43172 522 aaKnown RBP eCLIP23.59■■□□□ 1.37
RAPGEF1-206ENST00000438647 IGHEP01854 428 aa23.59■■□□□ 1.37
RAPGEF1-206ENST00000438647 C1QAP02745 245 aa23.59■■□□□ 1.37
RAPGEF1-206ENST00000438647 STMN1P16949 149 aa23.59■■□□□ 1.37
RAPGEF1-206ENST00000438647 PPP1R3AQ16821 1122 aa23.59■■□□□ 1.37
RAPGEF1-206ENST00000438647 LACTB2Q53H82 288 aaPredicted RBP23.59■■□□□ 1.37
RAPGEF1-206ENST00000438647 FRA10AC1Q70Z53 315 aa23.59■■□□□ 1.37
RAPGEF1-206ENST00000438647 MED25Q71SY5 747 aa23.59■■□□□ 1.37
RAPGEF1-206ENST00000438647 PPM1NQ8N819 430 aa23.59■■□□□ 1.37
RAPGEF1-206ENST00000438647 FBF1Q8TES7 1133 aa23.59■■□□□ 1.37
RAPGEF1-206ENST00000438647 NACC2Q96BF6 587 aa23.59■■□□□ 1.37
RAPGEF1-206ENST00000438647 THAP11Q96EK4 314 aa23.59■■□□□ 1.37
RAPGEF1-206ENST00000438647 DERL2Q9GZP9 239 aa23.59■■□□□ 1.37
RAPGEF1-206ENST00000438647 ZNF304Q9HCX3 659 aa23.59■■□□□ 1.37
RAPGEF1-206ENST00000438647 CTNNAL1Q9UBT7 734 aa23.59■■□□□ 1.37
RAPGEF1-206ENST00000438647 TLK1Q9UKI8 766 aa23.59■■□□□ 1.37
RAPGEF1-206ENST00000438647 RUVBL1Q9Y265 456 aaKnown RBP23.59■■□□□ 1.37
RAPGEF1-206ENST00000438647 NPEPPSL1A6NEC2 478 aa23.58■■□□□ 1.37
RAPGEF1-206ENST00000438647 CDC7O00311 574 aa23.58■■□□□ 1.37
RAPGEF1-206ENST00000438647 PEX12O00623 359 aa23.58■■□□□ 1.37
RAPGEF1-206ENST00000438647 ANXA5P08758 320 aa23.58■■□□□ 1.37
RAPGEF1-206ENST00000438647 OR1D4P47884 311 aa23.58■■□□□ 1.37
RAPGEF1-206ENST00000438647 CDKL1Q00532 357 aa23.58■■□□□ 1.37
RAPGEF1-206ENST00000438647 CPZQ66K79 652 aa23.58■■□□□ 1.37
RAPGEF1-206ENST00000438647 TCTN3Q6NUS6 607 aa23.58■■□□□ 1.37
RAPGEF1-206ENST00000438647 PLD3Q8IV08 490 aa23.58■■□□□ 1.37
RAPGEF1-206ENST00000438647 METTL27Q8N6F8 245 aaPredicted RBP23.58■■□□□ 1.37
RAPGEF1-206ENST00000438647 NOA1Q8NC60 698 aaKnown RBP23.58■■□□□ 1.37
RAPGEF1-206ENST00000438647 ANKRD49Q8WVL7 239 aa23.58■■□□□ 1.37
RAPGEF1-206ENST00000438647 COL26A1Q96A83 441 aa23.58■■□□□ 1.37
RAPGEF1-206ENST00000438647 C10orf90Q96M02 699 aa23.58■■□□□ 1.37
RAPGEF1-206ENST00000438647 IKZF3Q9UKT9 509 aa23.58■■□□□ 1.37
RAPGEF1-206ENST00000438647 G3BP2Q9UN86 482 aaKnown RBP23.58■■□□□ 1.37
RAPGEF1-206ENST00000438647 OARD1Q9Y530 152 aa23.58■■□□□ 1.37
RAPGEF1-206ENST00000438647 ZNF462Q96JM2 2506 aa23.57■■□□□ 1.36
RAPGEF1-206ENST00000438647 KCNE1BA0A087WTH5 132 aa23.57■■□□□ 1.36
RAPGEF1-206ENST00000438647 CNOT3O75175 753 aaKnown RBP23.57■■□□□ 1.36
RAPGEF1-206ENST00000438647 CDH1P12830 882 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms