RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 LAPTM5Q13571 262 aa24.81■■□□□ 1.56
CPNE1-216ENST00000437340 HIST2H2ACQ16777 129 aaPredicted RBP24.81■■□□□ 1.56
CPNE1-216ENST00000437340 PGS1Q32NB8 556 aa24.81■■□□□ 1.56
CPNE1-216ENST00000437340 INTS11Q5TA45 600 aaKnown RBP24.81■■□□□ 1.56
CPNE1-216ENST00000437340 HIST2H2AA3Q6FI13 130 aa24.81■■□□□ 1.56
CPNE1-216ENST00000437340 OR52E4Q8NGH9 312 aa24.81■■□□□ 1.56
CPNE1-216ENST00000437340 CHTF18Q8WVB6 975 aa24.81■■□□□ 1.56
CPNE1-216ENST00000437340 SLC5A11Q8WWX8 675 aa24.81■■□□□ 1.56
CPNE1-216ENST00000437340 TFGQ92734 400 aaPredicted RBP24.81■■□□□ 1.56
CPNE1-216ENST00000437340 GBP5Q96PP8 586 aa24.81■■□□□ 1.56
CPNE1-216ENST00000437340 EBPLQ9BY08 206 aa24.81■■□□□ 1.56
CPNE1-216ENST00000437340 PIF1Q9H611 641 aa24.81■■□□□ 1.56
CPNE1-216ENST00000437340 C8orf4Q9NR00 106 aa24.81■■□□□ 1.56
CPNE1-216ENST00000437340 PDP2Q9P2J9 529 aa24.81■■□□□ 1.56
CPNE1-216ENST00000437340 SLC23A2Q9UGH3 650 aa24.81■■□□□ 1.56
CPNE1-216ENST00000437340 PRKAB1Q9Y478 270 aa24.81■■□□□ 1.56
CPNE1-216ENST00000437340 TRPM6Q9BX84 2022 aa24.81■■□□□ 1.56
CPNE1-216ENST00000437340 PCNAP12004 261 aa24.8■■□□□ 1.56
CPNE1-216ENST00000437340 CDH1P12830 882 aa24.8■■□□□ 1.56
CPNE1-216ENST00000437340 HSD17B2P37059 387 aa24.8■■□□□ 1.56
CPNE1-216ENST00000437340 TRPC1P48995 793 aa24.8■■□□□ 1.56
CPNE1-216ENST00000437340 CLCN2P51788 898 aa24.8■■□□□ 1.56
CPNE1-216ENST00000437340 SEC13P55735 322 aa24.8■■□□□ 1.56
CPNE1-216ENST00000437340 RPS21P63220 83 aaKnown RBP24.8■■□□□ 1.56
CPNE1-216ENST00000437340 PRKCQQ04759 706 aa24.8■■□□□ 1.56
CPNE1-216ENST00000437340 ARHGAP19Q14CB8 494 aa24.8■■□□□ 1.56
CPNE1-216ENST00000437340 SDE2Q6IQ49 451 aa24.8■■□□□ 1.56
CPNE1-216ENST00000437340 ZBTB49Q6ZSB9 765 aa24.8■■□□□ 1.56
CPNE1-216ENST00000437340 TP53I13Q8NBR0 393 aaPredicted RBP24.8■■□□□ 1.56
CPNE1-216ENST00000437340 ZNF548Q8NEK5 533 aaPredicted RBP24.8■■□□□ 1.56
CPNE1-216ENST00000437340 SPDYE1Q8NFV5 336 aaPredicted RBP24.8■■□□□ 1.56
CPNE1-216ENST00000437340 OR8J2Q8NGG1 315 aa24.8■■□□□ 1.56
CPNE1-216ENST00000437340 OR10A6Q8NH74 314 aa24.8■■□□□ 1.56
CPNE1-216ENST00000437340 GUCD1Q96NT3 240 aa24.8■■□□□ 1.56
CPNE1-216ENST00000437340 C1QTNF2Q9BXJ5 285 aa24.8■■□□□ 1.56
CPNE1-216ENST00000437340 KAT8Q9H7Z6 458 aaKnown RBP24.8■■□□□ 1.56
CPNE1-216ENST00000437340 MBNL1Q9NR56 388 aaKnown RBP24.8■■□□□ 1.56
CPNE1-216ENST00000437340 SIRT5Q9NXA8 310 aa24.8■■□□□ 1.56
CPNE1-216ENST00000437340 ZFR2Q9UPR6 939 aaKnown RBP24.8■■□□□ 1.56
CPNE1-216ENST00000437340 TSC22D4Q9Y3Q8 395 aa24.8■■□□□ 1.56
CPNE1-216ENST00000437340 PTPN6P29350 595 aa24.8■■□□□ 1.56
CPNE1-216ENST00000437340 SLBPQ14493 270 aaKnown RBP eCLIP24.8■■□□□ 1.56
CPNE1-216ENST00000437340 IRF4Q15306 451 aa24.8■■□□□ 1.56
CPNE1-216ENST00000437340 KIAA1161Q6NSJ0 714 aa24.8■■□□□ 1.56
CPNE1-216ENST00000437340 NXPE4Q6UWF7 544 aa24.8■■□□□ 1.56
CPNE1-216ENST00000437340 LCTLQ6UWM7 567 aa24.8■■□□□ 1.56
CPNE1-216ENST00000437340 FAM110BQ8TC76 370 aa24.8■■□□□ 1.56
CPNE1-216ENST00000437340 CIB1Q99828 191 aa24.8■■□□□ 1.56
CPNE1-216ENST00000437340 CPPED1Q9BRF8 314 aaPredicted RBP24.8■■□□□ 1.56
CPNE1-216ENST00000437340 PHPT1Q9NRX4 125 aaPredicted RBP24.8■■□□□ 1.56
CPNE1-216ENST00000437340 GEMIN8Q9NWZ8 242 aaKnown RBP24.8■■□□□ 1.56
CPNE1-216ENST00000437340 INVSQ9Y283 1065 aa24.8■■□□□ 1.56
CPNE1-216ENST00000437340 ELOVL7A1L3X0 281 aa24.79■■□□□ 1.56
CPNE1-216ENST00000437340 LRATO95237 230 aa24.79■■□□□ 1.56
CPNE1-216ENST00000437340 ETHE1O95571 254 aa24.79■■□□□ 1.56
CPNE1-216ENST00000437340 ERGP11308 486 aa24.79■■□□□ 1.56
CPNE1-216ENST00000437340 CCT8P50990 548 aa24.79■■□□□ 1.56
CPNE1-216ENST00000437340 CHN2P52757 468 aa24.79■■□□□ 1.56
CPNE1-216ENST00000437340 UGT8Q16880 541 aa24.79■■□□□ 1.56
CPNE1-216ENST00000437340 CATSPEREQ5SY80 951 aa24.79■■□□□ 1.56
CPNE1-216ENST00000437340 GALNT18Q6P9A2 607 aa24.79■■□□□ 1.56
CPNE1-216ENST00000437340 UGT2A3Q6UWM9 527 aa24.79■■□□□ 1.56
CPNE1-216ENST00000437340 DNAJC14Q6Y2X3 702 aaPredicted RBP24.79■■□□□ 1.56
CPNE1-216ENST00000437340 OR5K2Q8NHB8 316 aa24.79■■□□□ 1.56
CPNE1-216ENST00000437340 NELL1Q92832 810 aa24.79■■□□□ 1.56
CPNE1-216ENST00000437340 POP5Q969H6 163 aaKnown RBP24.79■■□□□ 1.56
CPNE1-216ENST00000437340 UBE2E3Q969T4 207 aa24.79■■□□□ 1.56
CPNE1-216ENST00000437340 HAUS8Q9BT25 410 aa24.79■■□□□ 1.56
CPNE1-216ENST00000437340 OSBPL11Q9BXB4 747 aa24.79■■□□□ 1.56
CPNE1-216ENST00000437340 IKZF5Q9H5V7 419 aa24.79■■□□□ 1.56
CPNE1-216ENST00000437340 FAM120CQ9NX05 1096 aaKnown RBP24.79■■□□□ 1.56
CPNE1-216ENST00000437340 FBXL12Q9NXK8 326 aa24.79■■□□□ 1.56
CPNE1-216ENST00000437340 ACSL5Q9ULC5 683 aa24.79■■□□□ 1.56
CPNE1-216ENST00000437340 DPPA5A6NC42 116 aa24.78■■□□□ 1.56
CPNE1-216ENST00000437340 VGLL3A8MV65 326 aa24.78■■□□□ 1.56
CPNE1-216ENST00000437340 FAM220BPB1ANY3 271 aa24.78■■□□□ 1.56
CPNE1-216ENST00000437340 PLRG1O43660 514 aaKnown RBP24.78■■□□□ 1.56
CPNE1-216ENST00000437340 FOSL2P15408 326 aa24.78■■□□□ 1.56
CPNE1-216ENST00000437340 DMPKQ09013 629 aa24.78■■□□□ 1.56
CPNE1-216ENST00000437340 CALHM3Q86XJ0 350 aa24.78■■□□□ 1.56
CPNE1-216ENST00000437340 C1orf52Q8N6N3 182 aaKnown RBP24.78■■□□□ 1.56
CPNE1-216ENST00000437340 OR5AR1Q8NGP9 310 aa24.78■■□□□ 1.56
CPNE1-216ENST00000437340 PIPSLA2A3N6 862 aa24.77■■□□□ 1.56
CPNE1-216ENST00000437340 RFXANKO14593 260 aa24.77■■□□□ 1.56
CPNE1-216ENST00000437340 GSTA4O15217 222 aa24.77■■□□□ 1.56
CPNE1-216ENST00000437340 SCELO95171 688 aa24.77■■□□□ 1.56
CPNE1-216ENST00000437340 PAK4O96013 591 aaPredicted RBP24.77■■□□□ 1.56
CPNE1-216ENST00000437340 RPS13P62277 151 aaKnown RBP24.77■■□□□ 1.56
CPNE1-216ENST00000437340 RAE1P78406 368 aaKnown RBP24.77■■□□□ 1.56
CPNE1-216ENST00000437340 SGCGQ13326 291 aa24.77■■□□□ 1.56
CPNE1-216ENST00000437340 TSTA3Q13630 321 aaPredicted RBP24.77■■□□□ 1.56
CPNE1-216ENST00000437340 FGL2Q14314 439 aa24.77■■□□□ 1.56
CPNE1-216ENST00000437340 ATP6AP1Q15904 470 aa24.77■■□□□ 1.56
CPNE1-216ENST00000437340 GTDC1Q4AE62 458 aa24.77■■□□□ 1.56
CPNE1-216ENST00000437340 TMEM196Q5HYL7 178 aa24.77■■□□□ 1.56
CPNE1-216ENST00000437340 PRAMEF14Q5SWL7 426 aa24.77■■□□□ 1.56
CPNE1-216ENST00000437340 PRAMEF13Q5VWM6 474 aa24.77■■□□□ 1.56
CPNE1-216ENST00000437340 OR4F3Q6IEY1 312 aa24.77■■□□□ 1.56
CPNE1-216ENST00000437340 KIAA1211LQ6NV74 962 aa24.77■■□□□ 1.56
CPNE1-216ENST00000437340 SLC29A1Q99808 456 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms