RNA–Protein interactions for RNA: ENST00000436786.1

LINC01239-202, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 2 BASIC

Gene LINC01239, Length 2,347 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-202ENST00000436786 GSDMBQ8TAX9 411 aa4.21□□□□□ -1.74
LINC01239-202ENST00000436786 HMGCLL1Q8TB92 370 aa4.21□□□□□ -1.74
LINC01239-202ENST00000436786 BRIX1Q8TDN6 353 aaKnown RBP4.21□□□□□ -1.74
LINC01239-202ENST00000436786 RELTQ969Z4 430 aa4.21□□□□□ -1.74
LINC01239-202ENST00000436786 HES6Q96HZ4 224 aa4.21□□□□□ -1.74
LINC01239-202ENST00000436786 C10orf90Q96M02 699 aa4.21□□□□□ -1.74
LINC01239-202ENST00000436786 TRIM56Q9BRZ2 755 aaKnown RBP4.21□□□□□ -1.74
LINC01239-202ENST00000436786 DPH7Q9BTV6 452 aa4.21□□□□□ -1.74
LINC01239-202ENST00000436786 YIPF2Q9BWQ6 316 aa4.21□□□□□ -1.74
LINC01239-202ENST00000436786 RAB6BQ9NRW1 208 aa4.21□□□□□ -1.74
LINC01239-202ENST00000436786 COPG2Q9UBF2 871 aa4.21□□□□□ -1.74
LINC01239-202ENST00000436786 ANAPC5Q9UJX4 755 aa4.21□□□□□ -1.74
LINC01239-202ENST00000436786 ZNF148Q9UQR1 794 aa4.21□□□□□ -1.74
LINC01239-202ENST00000436786 FAM169AQ9Y6X4 670 aa4.21□□□□□ -1.74
LINC01239-202ENST00000436786 PIKFYVEQ9Y2I7 2098 aa4.21□□□□□ -1.74
LINC01239-202ENST00000436786 FER1L5A0AVI2 2057 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 SPTBN1Q01082 2364 aaKnown RBP4.2□□□□□ -1.74
LINC01239-202ENST00000436786 IGLV3-12A0A075B6K2 115 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 NSG1A0A0A6YYJ2 146 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 DYTNA2CJ06 578 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 H0YGG7 62 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 KPNA5O15131 536 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 NDUFS3O75489 264 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 USP1O94782 785 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 SERPINA7P05543 415 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 APRTP07741 180 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 POU3F2P20265 443 aaPredicted RBP4.2□□□□□ -1.74
LINC01239-202ENST00000436786 RPS3P23396 243 aaKnown RBP eCLIP4.2□□□□□ -1.74
LINC01239-202ENST00000436786 ELAVL4P26378 380 aaKnown RBP4.2□□□□□ -1.74
LINC01239-202ENST00000436786 MST1P26927 711 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 NMBRP28336 390 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 FMO4P31512 558 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 SOX11P35716 441 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 PPARGP37231 505 aaPredicted RBP4.2□□□□□ -1.74
LINC01239-202ENST00000436786 ZNF75DP51815 510 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 TDGF1P3P51864 188 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 EMP2P54851 167 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 EIF3BP55884 814 aaKnown RBP4.2□□□□□ -1.74
LINC01239-202ENST00000436786 SESN2P58004 480 aaPredicted RBP4.2□□□□□ -1.74
LINC01239-202ENST00000436786 ARF3P61204 181 aaPredicted RBP4.2□□□□□ -1.74
LINC01239-202ENST00000436786 HKDC1Q2TB90 917 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 PCID2Q5JVF3 399 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 CTSL3PQ5NE16 218 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 CNSTQ6PJW8 725 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 SUSD1Q6UWL2 747 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 OTOAQ7RTW8 1153 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 MCEMP1Q8IX19 187 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 RAB42Q8N4Z0 105 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 C1orf54Q8WWF1 131 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 HAS2Q92819 552 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 CABS1Q96KC9 395 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 PANX3Q96QZ0 392 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 DESI2Q9BSY9 194 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 ACAT2Q9BWD1 397 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 TREX1Q9NSU2 369 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 GALPQ9UBC7 116 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 TRPC4Q9UBN4 977 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 GNPTGQ9UJJ9 305 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 CRYBG3Q68DQ2 2970 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 IGHV1-45A0A0A0MS14 117 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 A0A0A6YYC8 382 aaPredicted RBP4.2□□□□□ -1.74
LINC01239-202ENST00000436786 TRAV17A0A0B4J275 112 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 IGKV1-8A0A0C4DH67 115 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 OR2A25A4D2G3 310 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 IDSB3KWA1 339 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 I3L1I5 382 aaPredicted RBP4.2□□□□□ -1.74
LINC01239-202ENST00000436786 NIPSNAP2O75323 286 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 UNC5CO95185 931 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 BMP10O95393 424 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 MATN4O95460 622 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 WDPCPO95876 746 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 HEXBP07686 556 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 ERVK-10P10266 1014 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 ITGAMP11215 1152 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 HOXB4P17483 251 aaPredicted RBP4.2□□□□□ -1.74
LINC01239-202ENST00000436786 CXCR2P25025 360 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 CMPK1P30085 196 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 RPA3P35244 121 aaPredicted RBP4.2□□□□□ -1.74
LINC01239-202ENST00000436786 RPL22P35268 128 aaKnown RBP4.2□□□□□ -1.74
LINC01239-202ENST00000436786 SLC26A3P40879 764 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 CCNFP41002 786 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 GUCA2AQ02747 115 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 NAA30Q147X3 362 aaPredicted RBP4.2□□□□□ -1.74
LINC01239-202ENST00000436786 SYT16Q17RD7 645 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 KCTD19Q17RG1 926 aaPredicted RBP4.2□□□□□ -1.74
LINC01239-202ENST00000436786 MUM1Q2TAK8 710 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.2□□□□□ -1.74
LINC01239-202ENST00000436786 CES3Q6UWW8 571 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 LYPD8Q6UX82 237 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 GFRALQ6UXV0 394 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 PAQR7Q86WK9 346 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 LRRC6Q86X45 466 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 SLC13A5Q86YT5 568 aaPredicted RBP4.2□□□□□ -1.74
LINC01239-202ENST00000436786 CSNK1A1LQ8N752 337 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 AMER3Q8N944 861 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 ITLN2Q8WWU7 325 aaPredicted RBP4.2□□□□□ -1.74
LINC01239-202ENST00000436786 NR4A3Q92570 626 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 PEX13Q92968 403 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 FAM136AQ96C01 138 aa4.2□□□□□ -1.74
LINC01239-202ENST00000436786 MMABQ96EY8 250 aaPredicted RBP4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms