RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 VAPBO95292 243 aa10.39□□□□□ -0.75
SPTLC1P4-201ENST00000435997 SLC16A8O95907 504 aa10.39□□□□□ -0.75
SPTLC1P4-201ENST00000435997 EMP2P54851 167 aa10.39□□□□□ -0.75
SPTLC1P4-201ENST00000435997 TAP2Q03519 686 aa10.39□□□□□ -0.75
SPTLC1P4-201ENST00000435997 PRDX1Q06830 199 aaKnown RBP10.39□□□□□ -0.75
SPTLC1P4-201ENST00000435997 ART3Q13508 389 aa10.39□□□□□ -0.75
SPTLC1P4-201ENST00000435997 SNX1Q13596 522 aa10.39□□□□□ -0.75
SPTLC1P4-201ENST00000435997 FAM53BQ14153 422 aa10.39□□□□□ -0.75
SPTLC1P4-201ENST00000435997 CCNG2Q16589 344 aa10.39□□□□□ -0.75
SPTLC1P4-201ENST00000435997 ACSBG2Q5FVE4 666 aa10.39□□□□□ -0.75
SPTLC1P4-201ENST00000435997 ICE2Q659A1 982 aa10.39□□□□□ -0.75
SPTLC1P4-201ENST00000435997 KIAA0930Q6ICG6 404 aaPredicted RBP10.39□□□□□ -0.75
SPTLC1P4-201ENST00000435997 MRNIPQ6NTE8 343 aa10.39□□□□□ -0.75
SPTLC1P4-201ENST00000435997 HIBCHQ6NVY1 386 aaPredicted RBP10.39□□□□□ -0.75
SPTLC1P4-201ENST00000435997 LRRC8BQ6P9F7 803 aa10.39□□□□□ -0.75
SPTLC1P4-201ENST00000435997 SUSD1Q6UWL2 747 aa10.39□□□□□ -0.75
SPTLC1P4-201ENST00000435997 NEK10Q6ZWH5 1172 aa10.39□□□□□ -0.75
SPTLC1P4-201ENST00000435997 SIRT6Q8N6T7 355 aa10.39□□□□□ -0.75
SPTLC1P4-201ENST00000435997 ZNF480Q8WV37 535 aa10.39□□□□□ -0.75
SPTLC1P4-201ENST00000435997 IMMP1LQ96LU5 166 aa10.39□□□□□ -0.75
SPTLC1P4-201ENST00000435997 TCF12Q99081 682 aa10.39□□□□□ -0.75
SPTLC1P4-201ENST00000435997 PKP4Q99569 1192 aa10.39□□□□□ -0.75
SPTLC1P4-201ENST00000435997 DRC3Q9H069 523 aa10.39□□□□□ -0.75
SPTLC1P4-201ENST00000435997 PLA2G3Q9NZ20 509 aa10.39□□□□□ -0.75
SPTLC1P4-201ENST00000435997 BFARQ9NZS9 450 aa10.39□□□□□ -0.75
SPTLC1P4-201ENST00000435997 TAC3Q9UHF0 121 aa10.39□□□□□ -0.75
SPTLC1P4-201ENST00000435997 SOX13Q9UN79 622 aa10.39□□□□□ -0.75
SPTLC1P4-201ENST00000435997 ZKSCAN5Q9Y2L8 839 aa10.39□□□□□ -0.75
SPTLC1P4-201ENST00000435997 GOLGA8KD6RF30 607 aa10.38□□□□□ -0.75
SPTLC1P4-201ENST00000435997 PRSS44E7EML9 344 aa10.38□□□□□ -0.75
SPTLC1P4-201ENST00000435997 GOLGA8TH3BQL2 631 aa10.38□□□□□ -0.75
SPTLC1P4-201ENST00000435997 WDPCPO95876 746 aa10.38□□□□□ -0.75
SPTLC1P4-201ENST00000435997 ITGAMP11215 1152 aa10.38□□□□□ -0.75
SPTLC1P4-201ENST00000435997 TPSB2P20231 275 aa10.38□□□□□ -0.75
SPTLC1P4-201ENST00000435997 ELAVL4P26378 380 aaKnown RBP10.38□□□□□ -0.75
SPTLC1P4-201ENST00000435997 MGAT1P26572 445 aa10.38□□□□□ -0.75
SPTLC1P4-201ENST00000435997 MST1P26927 711 aa10.38□□□□□ -0.75
SPTLC1P4-201ENST00000435997 FMO4P31512 558 aa10.38□□□□□ -0.75
SPTLC1P4-201ENST00000435997 HSD17B2P37059 387 aa10.38□□□□□ -0.75
SPTLC1P4-201ENST00000435997 CA7P43166 264 aa10.38□□□□□ -0.75
SPTLC1P4-201ENST00000435997 MAGEA6P43360 314 aa10.38□□□□□ -0.75
SPTLC1P4-201ENST00000435997 NPY2RP49146 381 aa10.38□□□□□ -0.75
SPTLC1P4-201ENST00000435997 CLCN7P51798 805 aa10.38□□□□□ -0.75
SPTLC1P4-201ENST00000435997 PNLIPRP1P54315 467 aa10.38□□□□□ -0.75
SPTLC1P4-201ENST00000435997 BASP1P80723 227 aaKnown RBP10.38□□□□□ -0.75
SPTLC1P4-201ENST00000435997 CDK16Q00536 496 aa10.38□□□□□ -0.75
SPTLC1P4-201ENST00000435997 KCNJ11Q14654 390 aa10.38□□□□□ -0.75
SPTLC1P4-201ENST00000435997 TPSAB1Q15661 275 aa10.38□□□□□ -0.75
SPTLC1P4-201ENST00000435997 SYT16Q17RD7 645 aa10.38□□□□□ -0.75
SPTLC1P4-201ENST00000435997 KLHL38Q2WGJ6 581 aa10.38□□□□□ -0.75
SPTLC1P4-201ENST00000435997 ANKRD20A4Q4UJ75 823 aa10.38□□□□□ -0.75
SPTLC1P4-201ENST00000435997 C4orf22Q6V702 233 aa10.38□□□□□ -0.75
SPTLC1P4-201ENST00000435997 CENPUQ71F23 418 aa10.38□□□□□ -0.75
SPTLC1P4-201ENST00000435997 VN1R4Q7Z5H5 301 aa10.38□□□□□ -0.75
SPTLC1P4-201ENST00000435997 CILP2Q8IUL8 1156 aa10.38□□□□□ -0.75
SPTLC1P4-201ENST00000435997 AMER2Q8N7J2 671 aa10.38□□□□□ -0.75
SPTLC1P4-201ENST00000435997 FAM136AQ96C01 138 aa10.38□□□□□ -0.75
SPTLC1P4-201ENST00000435997 CCDC120Q96HB5 630 aa10.38□□□□□ -0.75
SPTLC1P4-201ENST00000435997 MAGEB10Q96LZ2 347 aaPredicted RBP10.38□□□□□ -0.75
SPTLC1P4-201ENST00000435997 SLC30A3Q99726 388 aa10.38□□□□□ -0.75
SPTLC1P4-201ENST00000435997 TSGA10Q9BZW7 698 aa10.38□□□□□ -0.75
SPTLC1P4-201ENST00000435997 RBSNQ9H1K0 784 aa10.38□□□□□ -0.75
SPTLC1P4-201ENST00000435997 FAM114A2Q9NRY5 505 aa10.38□□□□□ -0.75
SPTLC1P4-201ENST00000435997 KLHL42Q9P2K6 505 aa10.38□□□□□ -0.75
SPTLC1P4-201ENST00000435997 COPG2Q9UBF2 871 aa10.38□□□□□ -0.75
SPTLC1P4-201ENST00000435997 TSR3Q9UJK0 312 aaKnown RBP10.38□□□□□ -0.75
SPTLC1P4-201ENST00000435997 DRG1Q9Y295 367 aaKnown RBP10.38□□□□□ -0.75
SPTLC1P4-201ENST00000435997 OTOGQ6ZRI0 2925 aa10.38□□□□□ -0.75
SPTLC1P4-201ENST00000435997 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.37□□□□□ -0.75
SPTLC1P4-201ENST00000435997 TCRBV7S3A2A0A539 114 aa10.37□□□□□ -0.75
SPTLC1P4-201ENST00000435997 OR5H15A6NDH6 313 aa10.37□□□□□ -0.75
SPTLC1P4-201ENST00000435997 TXNDC9O14530 226 aa10.37□□□□□ -0.75
SPTLC1P4-201ENST00000435997 CCNDBP1O95273 360 aa10.37□□□□□ -0.75
SPTLC1P4-201ENST00000435997 CATP04040 527 aaKnown RBP10.37□□□□□ -0.75
SPTLC1P4-201ENST00000435997 HEXBP07686 556 aa10.37□□□□□ -0.75
SPTLC1P4-201ENST00000435997 PKMP14618 531 aaKnown RBP10.37□□□□□ -0.75
SPTLC1P4-201ENST00000435997 POU3F2P20265 443 aaPredicted RBP10.37□□□□□ -0.75
SPTLC1P4-201ENST00000435997 CXCR2P25025 360 aa10.37□□□□□ -0.75
SPTLC1P4-201ENST00000435997 GRNP28799 593 aaKnown RBP10.37□□□□□ -0.75
SPTLC1P4-201ENST00000435997 RPA3P35244 121 aaPredicted RBP10.37□□□□□ -0.75
SPTLC1P4-201ENST00000435997 SKIV2L2P42285 1042 aaKnown RBP10.37□□□□□ -0.75
SPTLC1P4-201ENST00000435997 AP2B1P63010 937 aa10.37□□□□□ -0.75
SPTLC1P4-201ENST00000435997 ABATP80404 500 aa10.37□□□□□ -0.75
SPTLC1P4-201ENST00000435997 MAT1AQ00266 395 aaKnown RBP10.37□□□□□ -0.75
SPTLC1P4-201ENST00000435997 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.37□□□□□ -0.75
SPTLC1P4-201ENST00000435997 MEI1Q5TIA1 1274 aa10.37□□□□□ -0.75
SPTLC1P4-201ENST00000435997 SP5Q6BEB4 398 aaPredicted RBP10.37□□□□□ -0.75
SPTLC1P4-201ENST00000435997 PLAG1Q6DJT9 500 aa10.37□□□□□ -0.75
SPTLC1P4-201ENST00000435997 CES3Q6UWW8 571 aa10.37□□□□□ -0.75
SPTLC1P4-201ENST00000435997 GFRALQ6UXV0 394 aa10.37□□□□□ -0.75
SPTLC1P4-201ENST00000435997 BNC2Q6ZN30 1099 aaPredicted RBP10.37□□□□□ -0.75
SPTLC1P4-201ENST00000435997 PCGF5Q86SE9 256 aa10.37□□□□□ -0.75
SPTLC1P4-201ENST00000435997 SDCCAG8Q86SQ7 713 aaPredicted RBP10.37□□□□□ -0.75
SPTLC1P4-201ENST00000435997 REXO1L1PQ8IX06 675 aa10.37□□□□□ -0.75
SPTLC1P4-201ENST00000435997 MCEMP1Q8IX19 187 aa10.37□□□□□ -0.75
SPTLC1P4-201ENST00000435997 SRRM1Q8IYB3 904 aaKnown RBP10.37□□□□□ -0.75
SPTLC1P4-201ENST00000435997 SHISA5Q8N114 240 aa10.37□□□□□ -0.75
SPTLC1P4-201ENST00000435997 PPFIBP2Q8ND30 876 aa10.37□□□□□ -0.75
SPTLC1P4-201ENST00000435997 DNAJB8Q8NHS0 232 aa10.37□□□□□ -0.75
SPTLC1P4-201ENST00000435997 KCNJ9Q92806 393 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms