RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 POLE2P56282 527 aa15.54■□□□□ 0.08
SMPD4-207ENST00000435455 ARF3P61204 181 aaPredicted RBP15.54■□□□□ 0.08
SMPD4-207ENST00000435455 CDKL1Q00532 357 aa15.54■□□□□ 0.08
SMPD4-207ENST00000435455 PPP1R3AQ16821 1122 aa15.54■□□□□ 0.08
SMPD4-207ENST00000435455 LCTLQ6UWM7 567 aa15.54■□□□□ 0.08
SMPD4-207ENST00000435455 RELL1Q8IUW5 271 aa15.54■□□□□ 0.08
SMPD4-207ENST00000435455 OR4N4Q8N0Y3 316 aa15.54■□□□□ 0.08
SMPD4-207ENST00000435455 RERGQ96A58 199 aaPredicted RBP15.54■□□□□ 0.08
SMPD4-207ENST00000435455 FKBP10Q96AY3 582 aa15.54■□□□□ 0.08
SMPD4-207ENST00000435455 FMO2Q99518 471 aa15.54■□□□□ 0.08
SMPD4-207ENST00000435455 DERL2Q9GZP9 239 aa15.54■□□□□ 0.08
SMPD4-207ENST00000435455 CUEDC1Q9NWM3 386 aaPredicted RBP15.54■□□□□ 0.08
SMPD4-207ENST00000435455 KCNMB2Q9Y691 235 aa15.54■□□□□ 0.08
SMPD4-207ENST00000435455 HYKKA2RU49 373 aa15.53■□□□□ 0.08
SMPD4-207ENST00000435455 NPEPPSL1A6NEC2 478 aa15.53■□□□□ 0.08
SMPD4-207ENST00000435455 H7BY64 318 aa15.53■□□□□ 0.08
SMPD4-207ENST00000435455 CDC7O00311 574 aa15.53■□□□□ 0.08
SMPD4-207ENST00000435455 HAT1O14929 419 aa15.53■□□□□ 0.08
SMPD4-207ENST00000435455 ONECUT2O95948 504 aa15.53■□□□□ 0.08
SMPD4-207ENST00000435455 NFKB2Q00653 900 aa15.53■□□□□ 0.08
SMPD4-207ENST00000435455 KCNAB2Q13303 367 aa15.53■□□□□ 0.08
SMPD4-207ENST00000435455 IL10RAQ13651 578 aa15.53■□□□□ 0.08
SMPD4-207ENST00000435455 MUM1Q2TAK8 710 aa15.53■□□□□ 0.08
SMPD4-207ENST00000435455 PRTGQ2VWP7 1150 aa15.53■□□□□ 0.08
SMPD4-207ENST00000435455 FRA10AC1Q70Z53 315 aa15.53■□□□□ 0.08
SMPD4-207ENST00000435455 OR56A3Q8NH54 315 aa15.53■□□□□ 0.08
SMPD4-207ENST00000435455 ANKRD49Q8WVL7 239 aa15.53■□□□□ 0.08
SMPD4-207ENST00000435455 ALKBH8Q96BT7 664 aaKnown RBP15.53■□□□□ 0.08
SMPD4-207ENST00000435455 PRAP1Q96NZ9 151 aa15.53■□□□□ 0.08
SMPD4-207ENST00000435455 OR2A5Q96R48 311 aa15.53■□□□□ 0.08
SMPD4-207ENST00000435455 CYTH2Q99418 400 aa15.53■□□□□ 0.08
SMPD4-207ENST00000435455 SEMA4CQ9C0C4 833 aa15.53■□□□□ 0.08
SMPD4-207ENST00000435455 CAB39LQ9H9S4 337 aa15.53■□□□□ 0.08
SMPD4-207ENST00000435455 IKZF3Q9UKT9 509 aa15.53■□□□□ 0.08
SMPD4-207ENST00000435455 OARD1Q9Y530 152 aa15.53■□□□□ 0.08
SMPD4-207ENST00000435455 WISP3O95389 354 aaPredicted RBP15.52■□□□□ 0.08
SMPD4-207ENST00000435455 GUCA1CO95843 209 aa15.52■□□□□ 0.08
SMPD4-207ENST00000435455 ALBP02768 609 aa15.52■□□□□ 0.08
SMPD4-207ENST00000435455 ANXA5P08758 320 aa15.52■□□□□ 0.08
SMPD4-207ENST00000435455 CCDC166P0CW27 439 aa15.52■□□□□ 0.08
SMPD4-207ENST00000435455 NPPBP16860 134 aa15.52■□□□□ 0.08
SMPD4-207ENST00000435455 GRK3P35626 688 aa15.52■□□□□ 0.08
SMPD4-207ENST00000435455 FOLR3P41439 243 aa15.52■□□□□ 0.08
SMPD4-207ENST00000435455 RAB10P61026 200 aa15.52■□□□□ 0.08
SMPD4-207ENST00000435455 RPS15AP62244 130 aaKnown RBP15.52■□□□□ 0.08
SMPD4-207ENST00000435455 C19orf57Q0VDD7 668 aa15.52■□□□□ 0.08
SMPD4-207ENST00000435455 TSNQ15631 228 aaKnown RBP15.52■□□□□ 0.08
SMPD4-207ENST00000435455 ZKSCAN8Q15776 578 aaPredicted RBP15.52■□□□□ 0.08
SMPD4-207ENST00000435455 MRPL14Q6P1L8 145 aaKnown RBP15.52■□□□□ 0.08
SMPD4-207ENST00000435455 PRMT9Q6P2P2 845 aa15.52■□□□□ 0.08
SMPD4-207ENST00000435455 OVCH1Q7RTY7 1134 aa15.52■□□□□ 0.08
SMPD4-207ENST00000435455 RAB43Q86YS6 212 aa15.52■□□□□ 0.08
SMPD4-207ENST00000435455 APLFQ8IW19 511 aaPredicted RBP15.52■□□□□ 0.08
SMPD4-207ENST00000435455 CSNK1A1LQ8N752 337 aa15.52■□□□□ 0.08
SMPD4-207ENST00000435455 ADAMTS17Q8TE56 1095 aa15.52■□□□□ 0.08
SMPD4-207ENST00000435455 THAP11Q96EK4 314 aa15.52■□□□□ 0.08
SMPD4-207ENST00000435455 CABS1Q96KC9 395 aa15.52■□□□□ 0.08
SMPD4-207ENST00000435455 IP6K3Q96PC2 410 aa15.52■□□□□ 0.08
SMPD4-207ENST00000435455 NINJ2Q9NZG7 142 aa15.52■□□□□ 0.08
SMPD4-207ENST00000435455 PTRH2Q9Y3E5 179 aaKnown RBP15.52■□□□□ 0.08
SMPD4-207ENST00000435455 FASNP49327 2511 aaKnown RBP15.51■□□□□ 0.07
SMPD4-207ENST00000435455 ZNF462Q96JM2 2506 aa15.51■□□□□ 0.07
SMPD4-207ENST00000435455 PHGDHO43175 533 aaKnown RBP15.51■□□□□ 0.07
SMPD4-207ENST00000435455 RFPL1O75677 317 aa15.51■□□□□ 0.07
SMPD4-207ENST00000435455 KLF7O75840 302 aaPredicted RBP15.51■□□□□ 0.07
SMPD4-207ENST00000435455 FAM155BO75949 473 aa15.51■□□□□ 0.07
SMPD4-207ENST00000435455 C1QL1O75973 258 aa15.51■□□□□ 0.07
SMPD4-207ENST00000435455 ATXN8OSP0DMR3 200 aa15.51■□□□□ 0.07
SMPD4-207ENST00000435455 CDH1P12830 882 aa15.51■□□□□ 0.07
SMPD4-207ENST00000435455 ITGAXP20702 1163 aa15.51■□□□□ 0.07
SMPD4-207ENST00000435455 HNMTP50135 292 aa15.51■□□□□ 0.07
SMPD4-207ENST00000435455 PMS2P54278 862 aa15.51■□□□□ 0.07
SMPD4-207ENST00000435455 ATP6V0D1P61421 351 aa15.51■□□□□ 0.07
SMPD4-207ENST00000435455 CSNK1G2P78368 415 aa15.51■□□□□ 0.07
SMPD4-207ENST00000435455 SLC9A5Q14940 896 aa15.51■□□□□ 0.07
SMPD4-207ENST00000435455 SLMAPQ14BN4 828 aa15.51■□□□□ 0.07
SMPD4-207ENST00000435455 GARNL3Q5VVW2 1013 aa15.51■□□□□ 0.07
SMPD4-207ENST00000435455 ZNF843Q8N446 348 aa15.51■□□□□ 0.07
SMPD4-207ENST00000435455 OR2Y1Q8NGV0 311 aa15.51■□□□□ 0.07
SMPD4-207ENST00000435455 PYCR2Q96C36 320 aa15.51■□□□□ 0.07
SMPD4-207ENST00000435455 MVB12AQ96EY5 273 aa15.51■□□□□ 0.07
SMPD4-207ENST00000435455 C10orf90Q96M02 699 aa15.51■□□□□ 0.07
SMPD4-207ENST00000435455 EGFL8Q99944 293 aa15.51■□□□□ 0.07
SMPD4-207ENST00000435455 SLC26A1Q9H2B4 701 aa15.51■□□□□ 0.07
SMPD4-207ENST00000435455 ACSS3Q9H6R3 686 aa15.51■□□□□ 0.07
SMPD4-207ENST00000435455 WDR54Q9H977 334 aa15.51■□□□□ 0.07
SMPD4-207ENST00000435455 ZNF304Q9HCX3 659 aa15.51■□□□□ 0.07
SMPD4-207ENST00000435455 SLC22A11Q9NSA0 550 aa15.51■□□□□ 0.07
SMPD4-207ENST00000435455 CDC14AQ9UNH5 594 aa15.51■□□□□ 0.07
SMPD4-207ENST00000435455 MED13Q9UHV7 2174 aa15.51■□□□□ 0.07
SMPD4-207ENST00000435455 KCNE1BA0A087WTH5 132 aa15.5■□□□□ 0.07
SMPD4-207ENST00000435455 MKRN2OSH3BPM6 223 aa15.5■□□□□ 0.07
SMPD4-207ENST00000435455 PRPF4O43172 522 aaKnown RBP eCLIP15.5■□□□□ 0.071e-6■□□□□ 8.5
SMPD4-207ENST00000435455 CRABP2P29373 138 aa15.5■□□□□ 0.07
SMPD4-207ENST00000435455 CCR8P51685 355 aa15.5■□□□□ 0.07
SMPD4-207ENST00000435455 SSPNQ14714 243 aa15.5■□□□□ 0.07
SMPD4-207ENST00000435455 EFTUD2Q15029 972 aaKnown RBP eCLIP15.5■□□□□ 0.071e-6■■■■■ 43.6
SMPD4-207ENST00000435455 NDUFA9Q16795 377 aa15.5■□□□□ 0.07
SMPD4-207ENST00000435455 ZXDCQ2QGD7 858 aaPredicted RBP15.5■□□□□ 0.07
SMPD4-207ENST00000435455 CDKL4Q5MAI5 379 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms