RNA–Protein interactions for RNA: ENST00000435401.1

LINC00353-201, long intergenic non-protein coding RNA 353, humanhuman

TSL 5 BASIC

Gene LINC00353, Length 685 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00353-201ENST00000435401 ST8SIA3O43173 380 aa3.47□□□□□ -1.85
LINC00353-201ENST00000435401 PCDH7O60245 1069 aa3.47□□□□□ -1.85
LINC00353-201ENST00000435401 SNX3O60493 162 aa3.47□□□□□ -1.85
LINC00353-201ENST00000435401 SELENOFO60613 162 aa3.47□□□□□ -1.85
LINC00353-201ENST00000435401 RPS6KA5O75582 802 aa3.47□□□□□ -1.85
LINC00353-201ENST00000435401 SIX3O95343 332 aaPredicted RBP3.47□□□□□ -1.85
LINC00353-201ENST00000435401 SLU7O95391 586 aaKnown RBP3.47□□□□□ -1.85
LINC00353-201ENST00000435401 CAVIN2O95810 425 aa3.47□□□□□ -1.85
LINC00353-201ENST00000435401 ERVK-10P10266 1014 aa3.47□□□□□ -1.85
LINC00353-201ENST00000435401 KRT2P35908 639 aa3.47□□□□□ -1.85
LINC00353-201ENST00000435401 CHRNA7P36544 502 aa3.47□□□□□ -1.85
LINC00353-201ENST00000435401 HSD17B3P37058 310 aa3.47□□□□□ -1.85
LINC00353-201ENST00000435401 RPL21P46778 160 aaKnown RBP3.47□□□□□ -1.85
LINC00353-201ENST00000435401 MAZP56270 477 aaKnown RBP3.47□□□□□ -1.85
LINC00353-201ENST00000435401 UGCGQ16739 394 aa3.47□□□□□ -1.85
LINC00353-201ENST00000435401 ZNF876PQ49A33 203 aa3.47□□□□□ -1.85
LINC00353-201ENST00000435401 NHSL2Q5HYW2 709 aa3.47□□□□□ -1.85
LINC00353-201ENST00000435401 SLC35E4Q6ICL7 350 aa3.47□□□□□ -1.85
LINC00353-201ENST00000435401 CYB5D1Q6P9G0 228 aa3.47□□□□□ -1.85
LINC00353-201ENST00000435401 CEACAM20Q6UY09 585 aa3.47□□□□□ -1.85
LINC00353-201ENST00000435401 RASGEF1AQ8N9B8 481 aa3.47□□□□□ -1.85
LINC00353-201ENST00000435401 UXS1Q8NBZ7 420 aa3.47□□□□□ -1.85
LINC00353-201ENST00000435401 MAPK1IP1LQ8NDC0 245 aa3.47□□□□□ -1.85
LINC00353-201ENST00000435401 OR10V1Q8NGI7 309 aa3.47□□□□□ -1.85
LINC00353-201ENST00000435401 INPP5KQ9BT40 448 aa3.47□□□□□ -1.85
LINC00353-201ENST00000435401 ZMYND12Q9H0C1 365 aa3.47□□□□□ -1.85
LINC00353-201ENST00000435401 MINDY3Q9H8M7 445 aa3.47□□□□□ -1.85
LINC00353-201ENST00000435401 LMAN1LQ9HAT1 526 aa3.47□□□□□ -1.85
LINC00353-201ENST00000435401 SLC52A3Q9NQ40 469 aa3.47□□□□□ -1.85
LINC00353-201ENST00000435401 GSN-AS1Q9NRJ2 163 aa3.47□□□□□ -1.85
LINC00353-201ENST00000435401 PHPT1Q9NRX4 125 aaPredicted RBP3.47□□□□□ -1.85
LINC00353-201ENST00000435401 FGF21Q9NSA1 209 aa3.47□□□□□ -1.85
LINC00353-201ENST00000435401 SPHK1Q9NYA1 384 aa3.47□□□□□ -1.85
LINC00353-201ENST00000435401 ZNF624Q9P2J8 865 aaPredicted RBP3.47□□□□□ -1.85
LINC00353-201ENST00000435401 RASAL2Q9UJF2 1139 aa3.47□□□□□ -1.85
LINC00353-201ENST00000435401 ERICH3Q5RHP9 1530 aa3.47□□□□□ -1.85
LINC00353-201ENST00000435401 FHAD1B1AJZ9 1412 aa3.46□□□□□ -1.86
LINC00353-201ENST00000435401 ADCY10Q96PN6 1610 aa3.46□□□□□ -1.86
LINC00353-201ENST00000435401 TRAV24A0A0B4J272 114 aa3.46□□□□□ -1.86
LINC00353-201ENST00000435401 PPIP5K2O43314 1243 aa3.46□□□□□ -1.86
LINC00353-201ENST00000435401 FCGR3BO75015 233 aa3.46□□□□□ -1.86
LINC00353-201ENST00000435401 NME6O75414 186 aaPredicted RBP3.46□□□□□ -1.86
LINC00353-201ENST00000435401 NADKO95544 446 aaPredicted RBP3.46□□□□□ -1.86
LINC00353-201ENST00000435401 BAG3O95817 575 aa3.46□□□□□ -1.86
LINC00353-201ENST00000435401 GPIP06744 558 aa3.46□□□□□ -1.86
LINC00353-201ENST00000435401 VIMP08670 466 aaKnown RBP3.46□□□□□ -1.86
LINC00353-201ENST00000435401 ANKRD34CP0C6C1 535 aa3.46□□□□□ -1.86
LINC00353-201ENST00000435401 SUPT20HL2P0C7V6 817 aa3.46□□□□□ -1.86
LINC00353-201ENST00000435401 STAG3L1P0CL83 205 aa3.46□□□□□ -1.86
LINC00353-201ENST00000435401 LHCGRP22888 699 aa3.46□□□□□ -1.86
LINC00353-201ENST00000435401 TIA1P31483 386 aaKnown RBP eCLIP3.46□□□□□ -1.86
LINC00353-201ENST00000435401 CSTF2P33240 577 aaKnown RBP eCLIP3.46□□□□□ -1.86
LINC00353-201ENST00000435401 MAP2K2P36507 400 aa3.46□□□□□ -1.86
LINC00353-201ENST00000435401 MFAP3P55082 362 aa3.46□□□□□ -1.86
LINC00353-201ENST00000435401 CDR2Q01850 454 aa3.46□□□□□ -1.86
LINC00353-201ENST00000435401 SP3Q02447 781 aa3.46□□□□□ -1.86
LINC00353-201ENST00000435401 SCN1BQ07699 218 aa3.46□□□□□ -1.86
LINC00353-201ENST00000435401 GPR17Q13304 367 aa3.46□□□□□ -1.86
LINC00353-201ENST00000435401 E2F5Q15329 346 aa3.46□□□□□ -1.86
LINC00353-201ENST00000435401 PHKG1Q16816 387 aa3.46□□□□□ -1.86
LINC00353-201ENST00000435401 KIAA1644Q3SXP7 199 aa3.46□□□□□ -1.86
LINC00353-201ENST00000435401 ZC2HC1BQ5TFG8 222 aa3.46□□□□□ -1.86
LINC00353-201ENST00000435401 OR4A47Q6IF82 309 aa3.46□□□□□ -1.86
LINC00353-201ENST00000435401 FAM166AQ6J272 317 aa3.46□□□□□ -1.86
LINC00353-201ENST00000435401 FAM53AQ6NSI3 398 aaPredicted RBP3.46□□□□□ -1.86
LINC00353-201ENST00000435401 BTNL8Q6UX41 500 aa3.46□□□□□ -1.86
LINC00353-201ENST00000435401 ZNF497Q6ZNH5 498 aa3.46□□□□□ -1.86
LINC00353-201ENST00000435401 SH2D5Q6ZV89 423 aa3.46□□□□□ -1.86
LINC00353-201ENST00000435401 ANKRD33Q7Z3H0 272 aa3.46□□□□□ -1.86
LINC00353-201ENST00000435401 PIWIL3Q7Z3Z3 882 aaKnown RBP3.46□□□□□ -1.86
LINC00353-201ENST00000435401 NHLRC2Q8NBF2 726 aa3.46□□□□□ -1.86
LINC00353-201ENST00000435401 ADAD2Q8NCV1 583 aaKnown RBP3.46□□□□□ -1.86
LINC00353-201ENST00000435401 TRIM58Q8NG06 486 aa3.46□□□□□ -1.86
LINC00353-201ENST00000435401 HPSE2Q8WWQ2 592 aa3.46□□□□□ -1.86
LINC00353-201ENST00000435401 RIT1Q92963 219 aa3.46□□□□□ -1.86
LINC00353-201ENST00000435401 NDNQ99608 321 aa3.46□□□□□ -1.86
LINC00353-201ENST00000435401 TRPV4Q9HBA0 871 aa3.46□□□□□ -1.86
LINC00353-201ENST00000435401 SEPT10Q9P0V9 454 aa3.46□□□□□ -1.86
LINC00353-201ENST00000435401 KCNJ14Q9UNX9 436 aa3.46□□□□□ -1.86
LINC00353-201ENST00000435401 R4GN57 208 aa3.46□□□□□ -1.86
LINC00353-201ENST00000435401 CTTNBP2Q8WZ74 1663 aa3.46□□□□□ -1.86
LINC00353-201ENST00000435401 STK36Q9NRP7 1315 aa3.45□□□□□ -1.86
LINC00353-201ENST00000435401 NUP160Q12769 1436 aa3.45□□□□□ -1.86
LINC00353-201ENST00000435401 PRG4Q92954 1404 aaPredicted RBP3.45□□□□□ -1.86
LINC00353-201ENST00000435401 FER1L5A0AVI2 2057 aa3.45□□□□□ -1.86
LINC00353-201ENST00000435401 IGHV4-61A0A0C4DH41 118 aa3.45□□□□□ -1.86
LINC00353-201ENST00000435401 TRMUO75648 421 aaKnown RBP3.45□□□□□ -1.86
LINC00353-201ENST00000435401 IGHV4-59P01825 116 aa3.45□□□□□ -1.86
LINC00353-201ENST00000435401 PATE4P0C8F1 98 aa3.45□□□□□ -1.86
LINC00353-201ENST00000435401 SPP1P10451 314 aa3.45□□□□□ -1.86
LINC00353-201ENST00000435401 DUTP33316 252 aaKnown RBP3.45□□□□□ -1.86
LINC00353-201ENST00000435401 YWHAHQ04917 246 aaPredicted RBP3.45□□□□□ -1.86
LINC00353-201ENST00000435401 ILF2Q12905 390 aaKnown RBP3.45□□□□□ -1.86
LINC00353-201ENST00000435401 GPR33Q49SQ1 333 aa3.45□□□□□ -1.86
LINC00353-201ENST00000435401 ARHGEF16Q5VV41 709 aa3.45□□□□□ -1.86
LINC00353-201ENST00000435401 TXNRD3NBQ6F5E7 133 aa3.45□□□□□ -1.86
LINC00353-201ENST00000435401 PRSS55Q6UWB4 352 aaPredicted RBP3.45□□□□□ -1.86
LINC00353-201ENST00000435401 C15orf39Q6ZRI6 1047 aa3.45□□□□□ -1.86
LINC00353-201ENST00000435401 OTOAQ7RTW8 1153 aa3.45□□□□□ -1.86
LINC00353-201ENST00000435401 PIGWQ7Z7B1 504 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms