RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 CCNT2O60583 730 aaKnown RBP24.07■■□□□ 1.44
CPNE1-212ENST00000430570 SCRG1O75711 98 aa24.07■■□□□ 1.44
CPNE1-212ENST00000430570 OR2B3O76000 313 aa24.07■■□□□ 1.44
CPNE1-212ENST00000430570 DLGAP3O95886 979 aa24.07■■□□□ 1.44
CPNE1-212ENST00000430570 GFAPP14136 432 aa24.07■■□□□ 1.44
CPNE1-212ENST00000430570 HRH2P25021 359 aa24.07■■□□□ 1.44
CPNE1-212ENST00000430570 CD82P27701 267 aa24.07■■□□□ 1.44
CPNE1-212ENST00000430570 PCBP4P57723 403 aaKnown RBP24.07■■□□□ 1.44
CPNE1-212ENST00000430570 MEF2AQ02078 507 aaPredicted RBP24.07■■□□□ 1.44
CPNE1-212ENST00000430570 TGIF1Q15583 401 aa24.07■■□□□ 1.44
CPNE1-212ENST00000430570 DTX1Q86Y01 620 aa24.07■■□□□ 1.44
CPNE1-212ENST00000430570 TMEM126BQ8IUX1 230 aa24.07■■□□□ 1.44
CPNE1-212ENST00000430570 C4orf33Q8N1A6 199 aa24.07■■□□□ 1.44
CPNE1-212ENST00000430570 SLC38A9Q8NBW4 561 aa24.07■■□□□ 1.44
CPNE1-212ENST00000430570 UBTD2Q8WUN7 234 aa24.07■■□□□ 1.44
CPNE1-212ENST00000430570 HNRNPLLQ8WVV9 542 aaKnown RBP24.07■■□□□ 1.44
CPNE1-212ENST00000430570 ZNF285Q96NJ3 590 aa24.07■■□□□ 1.44
CPNE1-212ENST00000430570 OR2A5Q96R48 311 aa24.07■■□□□ 1.44
CPNE1-212ENST00000430570 SELENOSQ9BQE4 189 aa24.07■■□□□ 1.44
CPNE1-212ENST00000430570 SPNS1Q9H2V7 528 aa24.07■■□□□ 1.44
CPNE1-212ENST00000430570 MRPL46Q9H2W6 279 aaKnown RBP24.07■■□□□ 1.44
CPNE1-212ENST00000430570 STARD5Q9NSY2 213 aa24.07■■□□□ 1.44
CPNE1-212ENST00000430570 DNAJC11Q9NVH1 559 aa24.07■■□□□ 1.44
CPNE1-212ENST00000430570 DCDC2Q9UHG0 476 aa24.07■■□□□ 1.44
CPNE1-212ENST00000430570 KCNE2Q9Y6J6 123 aa24.07■■□□□ 1.44
CPNE1-212ENST00000430570 FRYQ5TBA9 3013 aa24.06■■□□□ 1.44
CPNE1-212ENST00000430570 APC2O95996 2303 aa24.06■■□□□ 1.44
CPNE1-212ENST00000430570 FEZF1A0PJY2 475 aa24.06■■□□□ 1.44
CPNE1-212ENST00000430570 TMEM8BA6NDV4 472 aa24.06■■□□□ 1.44
CPNE1-212ENST00000430570 IQCJ-SCHIP1C9J366 451 aaPredicted RBP24.06■■□□□ 1.44
CPNE1-212ENST00000430570 E7EQ34 232 aa24.06■■□□□ 1.44
CPNE1-212ENST00000430570 ZNF749O43361 778 aa24.06■■□□□ 1.44
CPNE1-212ENST00000430570 IPO13O94829 963 aaKnown RBP24.06■■□□□ 1.44
CPNE1-212ENST00000430570 KRT4P19013 534 aa24.06■■□□□ 1.44
CPNE1-212ENST00000430570 VSX2P58304 361 aaPredicted RBP24.06■■□□□ 1.44
CPNE1-212ENST00000430570 SLC18A2Q05940 514 aa24.06■■□□□ 1.44
CPNE1-212ENST00000430570 SETDB1Q15047 1291 aa24.06■■□□□ 1.44
CPNE1-212ENST00000430570 TRABD2AQ86V40 505 aa24.06■■□□□ 1.44
CPNE1-212ENST00000430570 LCA5Q86VQ0 697 aa24.06■■□□□ 1.44
CPNE1-212ENST00000430570 PTGR2Q8N8N7 351 aaPredicted RBP24.06■■□□□ 1.44
CPNE1-212ENST00000430570 OR4K1Q8NGD4 311 aa24.06■■□□□ 1.44
CPNE1-212ENST00000430570 EMCNQ9ULC0 261 aa24.06■■□□□ 1.44
CPNE1-212ENST00000430570 CHD8Q9HCK8 2581 aa24.05■■□□□ 1.44
CPNE1-212ENST00000430570 H0YGG7 62 aa24.05■■□□□ 1.44
CPNE1-212ENST00000430570 STMND1H3BQB6 276 aa24.05■■□□□ 1.44
CPNE1-212ENST00000430570 LCMT2O60294 686 aaKnown RBP24.05■■□□□ 1.44
CPNE1-212ENST00000430570 PRAMEF4O60810 478 aa24.05■■□□□ 1.44
CPNE1-212ENST00000430570 GSTA1P08263 222 aa24.05■■□□□ 1.44
CPNE1-212ENST00000430570 EZRP15311 586 aaKnown RBP24.05■■□□□ 1.44
CPNE1-212ENST00000430570 EPORP19235 508 aa24.05■■□□□ 1.44
CPNE1-212ENST00000430570 CCR8P51685 355 aa24.05■■□□□ 1.44
CPNE1-212ENST00000430570 ALDH18A1P54886 795 aaKnown RBP24.05■■□□□ 1.44
CPNE1-212ENST00000430570 ARF3P61204 181 aaPredicted RBP24.05■■□□□ 1.44
CPNE1-212ENST00000430570 RELAQ04206 551 aa24.05■■□□□ 1.44
CPNE1-212ENST00000430570 CDC16Q13042 620 aa24.05■■□□□ 1.44
CPNE1-212ENST00000430570 MDC1Q14676 2089 aaKnown RBP24.05■■□□□ 1.44
CPNE1-212ENST00000430570 KRT71Q3SY84 523 aa24.05■■□□□ 1.44
CPNE1-212ENST00000430570 WASHC2DQ5SRD0 308 aa24.05■■□□□ 1.44
CPNE1-212ENST00000430570 PRAMEF9Q5VWM5 478 aa24.05■■□□□ 1.44
CPNE1-212ENST00000430570 NXPE4Q6UWF7 544 aa24.05■■□□□ 1.44
CPNE1-212ENST00000430570 TMPRSS11BQ86T26 416 aa24.05■■□□□ 1.44
CPNE1-212ENST00000430570 GPR135Q8IZ08 494 aa24.05■■□□□ 1.44
CPNE1-212ENST00000430570 ZNF655Q8N720 491 aaPredicted RBP24.05■■□□□ 1.44
CPNE1-212ENST00000430570 SNX31Q8N9S9 440 aa24.05■■□□□ 1.44
CPNE1-212ENST00000430570 GALNT6Q8NCL4 622 aa24.05■■□□□ 1.44
CPNE1-212ENST00000430570 ZNF248Q8NDW4 579 aa24.05■■□□□ 1.44
CPNE1-212ENST00000430570 PHF21BQ96EK2 531 aa24.05■■□□□ 1.44
CPNE1-212ENST00000430570 IRAK4Q9NWZ3 460 aa24.05■■□□□ 1.44
CPNE1-212ENST00000430570 PCDHB3Q9Y5E6 796 aa24.05■■□□□ 1.44
CPNE1-212ENST00000430570 IGF2RP11717 2491 aa24.04■■□□□ 1.44
CPNE1-212ENST00000430570 RAD1O60671 282 aa24.04■■□□□ 1.44
CPNE1-212ENST00000430570 SRPX2O60687 465 aaPredicted RBP24.04■■□□□ 1.44
CPNE1-212ENST00000430570 GLRA3O75311 464 aa24.04■■□□□ 1.44
CPNE1-212ENST00000430570 SIX3O95343 332 aaPredicted RBP24.04■■□□□ 1.44
CPNE1-212ENST00000430570 VARSP26640 1264 aaKnown RBP24.04■■□□□ 1.44
CPNE1-212ENST00000430570 EIF2S3P41091 472 aaKnown RBP24.04■■□□□ 1.44
CPNE1-212ENST00000430570 CLN3Q13286 438 aa24.04■■□□□ 1.44
CPNE1-212ENST00000430570 CEP85LQ5SZL2 805 aa24.04■■□□□ 1.44
CPNE1-212ENST00000430570 SLCO4C1Q6ZQN7 724 aa24.04■■□□□ 1.44
CPNE1-212ENST00000430570 LRRC70Q7Z2Q7 622 aa24.04■■□□□ 1.44
CPNE1-212ENST00000430570 ZNF740Q8NDX6 193 aa24.04■■□□□ 1.44
CPNE1-212ENST00000430570 NKD1Q969G9 470 aa24.04■■□□□ 1.44
CPNE1-212ENST00000430570 C12orf65Q9H3J6 166 aaKnown RBP24.04■■□□□ 1.44
CPNE1-212ENST00000430570 AKIRIN1Q9H9L7 192 aaPredicted RBP24.04■■□□□ 1.44
CPNE1-212ENST00000430570 PELI2Q9HAT8 420 aa24.04■■□□□ 1.44
CPNE1-212ENST00000430570 AHCTF1Q8WYP5 2266 aa24.04■■□□□ 1.44
CPNE1-212ENST00000430570 K7EPI3 171 aa24.03■■□□□ 1.44
CPNE1-212ENST00000430570 EIF2S1P05198 315 aaKnown RBP24.03■■□□□ 1.44
CPNE1-212ENST00000430570 LIPCP11150 499 aa24.03■■□□□ 1.44
CPNE1-212ENST00000430570 CRHR1P34998 444 aa24.03■■□□□ 1.44
CPNE1-212ENST00000430570 BCL6P41182 706 aa24.03■■□□□ 1.44
CPNE1-212ENST00000430570 PCBP2Q15366 365 aaKnown RBP eCLIP24.03■■□□□ 1.441e-7■□□□□ 10.9
CPNE1-212ENST00000430570 TLDC1Q6P9B6 456 aa24.03■■□□□ 1.44
CPNE1-212ENST00000430570 KCNE4Q8WWG9 221 aa24.03■■□□□ 1.44
CPNE1-212ENST00000430570 DCBLD2Q96PD2 775 aa24.03■■□□□ 1.44
CPNE1-212ENST00000430570 ACTR5Q9H9F9 607 aaPredicted RBP24.03■■□□□ 1.44
CPNE1-212ENST00000430570 GPRC5BQ9NZH0 403 aa24.03■■□□□ 1.44
CPNE1-212ENST00000430570 OPTCQ9UBM4 332 aa24.03■■□□□ 1.44
CPNE1-212ENST00000430570 ZSCAN9O15535 394 aaPredicted RBP24.02■■□□□ 1.44
CPNE1-212ENST00000430570 SMIM24O75264 130 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms