RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 MED16Q9Y2X0 877 aa16.26■□□□□ 0.19
TRIM39-209ENST00000428728 HAT1O14929 419 aa16.25■□□□□ 0.19
TRIM39-209ENST00000428728 P2RX6O15547 441 aa16.25■□□□□ 0.19
TRIM39-209ENST00000428728 PRPF4O43172 522 aaKnown RBP eCLIP16.25■□□□□ 0.19
TRIM39-209ENST00000428728 DDAH2O95865 285 aa16.25■□□□□ 0.19
TRIM39-209ENST00000428728 ANXA5P08758 320 aa16.25■□□□□ 0.19
TRIM39-209ENST00000428728 EZRP15311 586 aaKnown RBP16.25■□□□□ 0.19
TRIM39-209ENST00000428728 HSD17B2P37059 387 aa16.25■□□□□ 0.19
TRIM39-209ENST00000428728 PRDX1Q06830 199 aaKnown RBP16.25■□□□□ 0.19
TRIM39-209ENST00000428728 CDC16Q13042 620 aa16.25■□□□□ 0.19
TRIM39-209ENST00000428728 DSG2Q14126 1118 aa16.25■□□□□ 0.19
TRIM39-209ENST00000428728 ZNF169Q14929 603 aaPredicted RBP16.25■□□□□ 0.19
TRIM39-209ENST00000428728 LONRF1Q17RB8 773 aa16.25■□□□□ 0.19
TRIM39-209ENST00000428728 IGFL2Q6UWQ7 119 aa16.25■□□□□ 0.19
TRIM39-209ENST00000428728 ISLR2Q6UXK2 745 aa16.25■□□□□ 0.19
TRIM39-209ENST00000428728 PIWIL4Q7Z3Z4 852 aaKnown RBP16.25■□□□□ 0.19
TRIM39-209ENST00000428728 PLD3Q8IV08 490 aa16.25■□□□□ 0.19
TRIM39-209ENST00000428728 CPNE9Q8IYJ1 553 aa16.25■□□□□ 0.19
TRIM39-209ENST00000428728 AGGF1Q8N302 714 aaeCLIP16.25■□□□□ 0.19
TRIM39-209ENST00000428728 CD200R1Q8TD46 325 aa16.25■□□□□ 0.19
TRIM39-209ENST00000428728 MMABQ96EY8 250 aaPredicted RBP16.25■□□□□ 0.19
TRIM39-209ENST00000428728 AGPAT4Q9NRZ5 378 aa16.25■□□□□ 0.19
TRIM39-209ENST00000428728 UTP6Q9NYH9 597 aaKnown RBP16.25■□□□□ 0.19
TRIM39-209ENST00000428728 CDC14AQ9UNH5 594 aa16.25■□□□□ 0.19
TRIM39-209ENST00000428728 DIDO1Q9BTC0 2240 aaKnown RBP16.25■□□□□ 0.19
TRIM39-209ENST00000428728 IGLV3-12A0A075B6K2 115 aa16.24■□□□□ 0.19
TRIM39-209ENST00000428728 NSG1A0A0A6YYJ2 146 aa16.24■□□□□ 0.19
TRIM39-209ENST00000428728 MAGEB16A2A368 324 aa16.24■□□□□ 0.19
TRIM39-209ENST00000428728 IDSB3KWA1 339 aa16.24■□□□□ 0.19
TRIM39-209ENST00000428728 E7ENX8 843 aa16.24■□□□□ 0.19
TRIM39-209ENST00000428728 PGRMC1O00264 195 aaKnown RBP16.24■□□□□ 0.19
TRIM39-209ENST00000428728 KLHL18O94889 574 aa16.24■□□□□ 0.19
TRIM39-209ENST00000428728 UQCRHP07919 91 aa16.24■□□□□ 0.19
TRIM39-209ENST00000428728 MPC1LP0DKB6 136 aa16.24■□□□□ 0.19
TRIM39-209ENST00000428728 COX6A1P12074 109 aa16.24■□□□□ 0.19
TRIM39-209ENST00000428728 ENO3P13929 434 aaPredicted RBP16.24■□□□□ 0.19
TRIM39-209ENST00000428728 MAGEA3P43357 314 aa16.24■□□□□ 0.19
TRIM39-209ENST00000428728 EMP2P54851 167 aa16.24■□□□□ 0.19
TRIM39-209ENST00000428728 TAP2Q03519 686 aa16.24■□□□□ 0.19
TRIM39-209ENST00000428728 CYP1B1Q16678 543 aa16.24■□□□□ 0.19
TRIM39-209ENST00000428728 SYT16Q17RD7 645 aa16.24■□□□□ 0.19
TRIM39-209ENST00000428728 AMER3Q8N944 861 aa16.24■□□□□ 0.19
TRIM39-209ENST00000428728 FBXO15Q8NCQ5 510 aaPredicted RBP16.24■□□□□ 0.19
TRIM39-209ENST00000428728 CALML6Q8TD86 181 aa16.24■□□□□ 0.19
TRIM39-209ENST00000428728 GRHL3Q8TE85 626 aa16.24■□□□□ 0.19
TRIM39-209ENST00000428728 ASB11Q8WXH4 323 aa16.24■□□□□ 0.19
TRIM39-209ENST00000428728 MVB12AQ96EY5 273 aa16.24■□□□□ 0.19
TRIM39-209ENST00000428728 PBKQ96KB5 322 aa16.24■□□□□ 0.19
TRIM39-209ENST00000428728 OR2A5Q96R48 311 aa16.24■□□□□ 0.19
TRIM39-209ENST00000428728 DRC3Q9H069 523 aa16.24■□□□□ 0.19
TRIM39-209ENST00000428728 C14orf105Q9NVL8 296 aa16.24■□□□□ 0.19
TRIM39-209ENST00000428728 SLC5A6Q9Y289 635 aa16.24■□□□□ 0.19
TRIM39-209ENST00000428728 DHRS7Q9Y394 339 aa16.24■□□□□ 0.19
TRIM39-209ENST00000428728 NEU2Q9Y3R4 380 aa16.24■□□□□ 0.19
TRIM39-209ENST00000428728 JRKLQ9Y4A0 524 aa16.24■□□□□ 0.19
TRIM39-209ENST00000428728 CACNA1DQ01668 2161 aa16.24■□□□□ 0.19
TRIM39-209ENST00000428728 A0A0A6YYC8 382 aaPredicted RBP16.23■□□□□ 0.19
TRIM39-209ENST00000428728 I3L1I5 382 aaPredicted RBP16.23■□□□□ 0.19
TRIM39-209ENST00000428728 LDLRP01130 860 aa16.23■□□□□ 0.19
TRIM39-209ENST00000428728 HEXBP07686 556 aa16.23■□□□□ 0.19
TRIM39-209ENST00000428728 CXCR2P25025 360 aa16.23■□□□□ 0.19
TRIM39-209ENST00000428728 IMPA1P29218 277 aa16.23■□□□□ 0.19
TRIM39-209ENST00000428728 TSFMP43897 325 aaKnown RBP16.23■□□□□ 0.19
TRIM39-209ENST00000428728 EMP3P54852 163 aa16.23■□□□□ 0.19
TRIM39-209ENST00000428728 MFAP5Q13361 173 aa16.23■□□□□ 0.19
TRIM39-209ENST00000428728 HSP90AA5PQ58FG0 334 aa16.23■□□□□ 0.19
TRIM39-209ENST00000428728 UBE2R2Q712K3 238 aaPredicted RBP16.23■□□□□ 0.19
TRIM39-209ENST00000428728 KBTBD2Q8IY47 623 aa16.23■□□□□ 0.19
TRIM39-209ENST00000428728 NAT8LQ8N9F0 302 aa16.23■□□□□ 0.19
TRIM39-209ENST00000428728 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.23■□□□□ 0.19
TRIM39-209ENST00000428728 COG1Q8WTW3 980 aa16.23■□□□□ 0.19
TRIM39-209ENST00000428728 C5orf34Q96MH7 638 aa16.23■□□□□ 0.19
TRIM39-209ENST00000428728 NAP1L3Q99457 506 aaPredicted RBP16.23■□□□□ 0.19
TRIM39-209ENST00000428728 BARD1Q99728 777 aaKnown RBP16.23■□□□□ 0.19
TRIM39-209ENST00000428728 FAM167BQ9BTA0 163 aa16.23■□□□□ 0.19
TRIM39-209ENST00000428728 AARSD1Q9BTE6 412 aaKnown RBP16.23■□□□□ 0.19
TRIM39-209ENST00000428728 IARS2Q9NSE4 1012 aaKnown RBP16.23■□□□□ 0.19
TRIM39-209ENST00000428728 KLHL42Q9P2K6 505 aa16.23■□□□□ 0.19
TRIM39-209ENST00000428728 FBXO5Q9UKT4 447 aa16.23■□□□□ 0.19
TRIM39-209ENST00000428728 NBPF19A0A087WUL8 3843 aa16.22■□□□□ 0.19
TRIM39-209ENST00000428728 GFYI3L273 518 aa16.22■□□□□ 0.19
TRIM39-209ENST00000428728 E2F3O00716 465 aa16.22■□□□□ 0.19
TRIM39-209ENST00000428728 FOXS1O43638 330 aa16.22■□□□□ 0.19
TRIM39-209ENST00000428728 ZBTB14O43829 449 aa16.22■□□□□ 0.19
TRIM39-209ENST00000428728 HAUS5O94927 633 aa16.22■□□□□ 0.19
TRIM39-209ENST00000428728 CELA2AP08217 269 aa16.22■□□□□ 0.19
TRIM39-209ENST00000428728 PRR35P0CG20 571 aa16.22■□□□□ 0.19
TRIM39-209ENST00000428728 SLC26A3P40879 764 aa16.22■□□□□ 0.19
TRIM39-209ENST00000428728 TBPL1P62380 186 aa16.22■□□□□ 0.19
TRIM39-209ENST00000428728 ABATP80404 500 aa16.22■□□□□ 0.19
TRIM39-209ENST00000428728 MAT1AQ00266 395 aaKnown RBP16.22■□□□□ 0.19
TRIM39-209ENST00000428728 TLR1Q15399 786 aa16.22■□□□□ 0.19
TRIM39-209ENST00000428728 GARNL3Q5VVW2 1013 aa16.22■□□□□ 0.19
TRIM39-209ENST00000428728 ATG9BQ674R7 924 aa16.22■□□□□ 0.19
TRIM39-209ENST00000428728 B3GNTL1Q67FW5 361 aaPredicted RBP16.22■□□□□ 0.19
TRIM39-209ENST00000428728 NDUFAF7Q7L592 441 aa16.22■□□□□ 0.19
TRIM39-209ENST00000428728 MAMDC2Q7Z304 686 aaPredicted RBP16.22■□□□□ 0.19
TRIM39-209ENST00000428728 KCNMB4Q86W47 210 aa16.22■□□□□ 0.19
TRIM39-209ENST00000428728 LRRC56Q8IYG6 542 aaPredicted RBP16.22■□□□□ 0.19
TRIM39-209ENST00000428728 SIRT6Q8N6T7 355 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms