RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 TP53BP2Q13625 1128 aa15.63■□□□□ 0.09
C9orf3-206ENST00000428313 SSX1Q16384 188 aa15.63■□□□□ 0.09
C9orf3-206ENST00000428313 MAPKAPK3Q16644 382 aa15.63■□□□□ 0.09
C9orf3-206ENST00000428313 FAM171A1Q5VUB5 890 aa15.63■□□□□ 0.09
C9orf3-206ENST00000428313 RANBP10Q6VN20 620 aa15.63■□□□□ 0.09
C9orf3-206ENST00000428313 ZNF605Q86T29 641 aa15.63■□□□□ 0.09
C9orf3-206ENST00000428313 CPA6Q8N4T0 437 aa15.63■□□□□ 0.09
C9orf3-206ENST00000428313 DNAJB8Q8NHS0 232 aa15.63■□□□□ 0.09
C9orf3-206ENST00000428313 KIAA1191Q96A73 305 aa15.63■□□□□ 0.09
C9orf3-206ENST00000428313 PRMT6Q96LA8 375 aaPredicted RBP15.63■□□□□ 0.09
C9orf3-206ENST00000428313 SENP8Q96LD8 212 aa15.63■□□□□ 0.09
C9orf3-206ENST00000428313 SLC6A15Q9H2J7 730 aa15.63■□□□□ 0.09
C9orf3-206ENST00000428313 MFSD1Q9H3U5 465 aa15.63■□□□□ 0.09
C9orf3-206ENST00000428313 PIGVQ9NUD9 493 aa15.63■□□□□ 0.09
C9orf3-206ENST00000428313 PHF11Q9UIL8 331 aa15.63■□□□□ 0.09
C9orf3-206ENST00000428313 STUB1Q9UNE7 303 aa15.63■□□□□ 0.09
C9orf3-206ENST00000428313 VPS9D1Q9Y2B5 631 aa15.63■□□□□ 0.09
C9orf3-206ENST00000428313 SAMHD1Q9Y3Z3 626 aaKnown RBP15.63■□□□□ 0.09
C9orf3-206ENST00000428313 KHNYNO15037 678 aaKnown RBP15.62■□□□□ 0.09
C9orf3-206ENST00000428313 DPM1O60762 260 aa15.62■□□□□ 0.09
C9orf3-206ENST00000428313 PMPCBO75439 489 aa15.62■□□□□ 0.09
C9orf3-206ENST00000428313 CCNDBP1O95273 360 aa15.62■□□□□ 0.09
C9orf3-206ENST00000428313 CELF2O95319 508 aaKnown RBP15.62■□□□□ 0.09
C9orf3-206ENST00000428313 VIPP01282 170 aa15.62■□□□□ 0.09
C9orf3-206ENST00000428313 SEMG1P04279 462 aa15.62■□□□□ 0.09
C9orf3-206ENST00000428313 FABP3P05413 133 aa15.62■□□□□ 0.09
C9orf3-206ENST00000428313 PRKAR1AP10644 381 aa15.62■□□□□ 0.09
C9orf3-206ENST00000428313 PRDX3P30048 256 aaKnown RBP15.62■□□□□ 0.09
C9orf3-206ENST00000428313 ALDH9A1P49189 494 aa15.62■□□□□ 0.09
C9orf3-206ENST00000428313 PLIN5Q00G26 463 aa15.62■□□□□ 0.09
C9orf3-206ENST00000428313 WSCD2Q2TBF2 565 aa15.62■□□□□ 0.09
C9orf3-206ENST00000428313 GCNT7Q6ZNI0 430 aa15.62■□□□□ 0.09
C9orf3-206ENST00000428313 ZZZ3Q8IYH5 903 aa15.62■□□□□ 0.09
C9orf3-206ENST00000428313 NLGN1Q8N2Q7 840 aa15.62■□□□□ 0.09
C9orf3-206ENST00000428313 DENND6BQ8NEG7 585 aa15.62■□□□□ 0.09
C9orf3-206ENST00000428313 OR56A4Q8NGH8 313 aa15.62■□□□□ 0.09
C9orf3-206ENST00000428313 STAG3L4Q8TBR4 150 aa15.62■□□□□ 0.09
C9orf3-206ENST00000428313 FAM120BQ96EK7 910 aaKnown RBP15.62■□□□□ 0.09
C9orf3-206ENST00000428313 SAMD11Q96NU1 681 aa15.62■□□□□ 0.09
C9orf3-206ENST00000428313 FSD1LQ9BXM9 530 aa15.62■□□□□ 0.09
C9orf3-206ENST00000428313 SLC6A17Q9H1V8 727 aa15.62■□□□□ 0.09
C9orf3-206ENST00000428313 OR51B5Q9H339 312 aa15.62■□□□□ 0.09
C9orf3-206ENST00000428313 NME7Q9Y5B8 376 aa15.62■□□□□ 0.09
C9orf3-206ENST00000428313 ZNF670-ZNF695F2Z2N8 137 aa15.61■□□□□ 0.09
C9orf3-206ENST00000428313 ZNF254O75437 659 aa15.61■□□□□ 0.09
C9orf3-206ENST00000428313 TSPAN19P0C672 248 aa15.61■□□□□ 0.09
C9orf3-206ENST00000428313 RPL17P18621 184 aaKnown RBP15.61■□□□□ 0.09
C9orf3-206ENST00000428313 CHRNA4P43681 627 aa15.61■□□□□ 0.09
C9orf3-206ENST00000428313 BTN1A1Q13410 526 aa15.61■□□□□ 0.09
C9orf3-206ENST00000428313 PYDC2Q56P42 97 aa15.61■□□□□ 0.09
C9orf3-206ENST00000428313 LIPIQ6XZB0 460 aa15.61■□□□□ 0.09
C9orf3-206ENST00000428313 GPRIN3Q6ZVF9 776 aa15.61■□□□□ 0.09
C9orf3-206ENST00000428313 SLC2A13Q96QE2 648 aa15.61■□□□□ 0.09
C9orf3-206ENST00000428313 MIXL1Q9H2W2 232 aa15.61■□□□□ 0.09
C9orf3-206ENST00000428313 MCCC2Q9HCC0 563 aa15.61■□□□□ 0.09
C9orf3-206ENST00000428313 AMBNQ9NP70 447 aa15.61■□□□□ 0.09
C9orf3-206ENST00000428313 ABCB9Q9NP78 766 aa15.61■□□□□ 0.09
C9orf3-206ENST00000428313 UBQLN2Q9UHD9 624 aa15.61■□□□□ 0.09
C9orf3-206ENST00000428313 PCTPQ9UKL6 214 aa15.61■□□□□ 0.09
C9orf3-206ENST00000428313 SBF1O95248 1867 aa15.61■□□□□ 0.09
C9orf3-206ENST00000428313 FABP7O15540 132 aa15.61■□□□□ 0.09
C9orf3-206ENST00000428313 HMGN1P05114 100 aa15.61■□□□□ 0.09
C9orf3-206ENST00000428313 ITGB7P26010 798 aa15.61■□□□□ 0.09
C9orf3-206ENST00000428313 ADORA2BP29275 332 aa15.61■□□□□ 0.09
C9orf3-206ENST00000428313 CCT3P49368 545 aaKnown RBP15.61■□□□□ 0.09
C9orf3-206ENST00000428313 MAP2K6P52564 334 aa15.61■□□□□ 0.09
C9orf3-206ENST00000428313 CYP4F2P78329 520 aa15.61■□□□□ 0.09
C9orf3-206ENST00000428313 RBBP7Q16576 425 aa15.61■□□□□ 0.09
C9orf3-206ENST00000428313 KLHL17Q6TDP4 642 aa15.61■□□□□ 0.09
C9orf3-206ENST00000428313 TFAP2EQ6VUC0 442 aa15.61■□□□□ 0.09
C9orf3-206ENST00000428313 TRIM69Q86WT6 500 aa15.61■□□□□ 0.09
C9orf3-206ENST00000428313 IFNL1Q8IU54 200 aa15.61■□□□□ 0.09
C9orf3-206ENST00000428313 SLC37A3Q8NCC5 494 aa15.61■□□□□ 0.09
C9orf3-206ENST00000428313 SH3RF2Q8TEC5 729 aa15.61■□□□□ 0.09
C9orf3-206ENST00000428313 SHARPINQ9H0F6 387 aa15.61■□□□□ 0.09
C9orf3-206ENST00000428313 REEP1Q9H902 201 aa15.61■□□□□ 0.09
C9orf3-206ENST00000428313 RNF146Q9NTX7 359 aa15.61■□□□□ 0.09
C9orf3-206ENST00000428313 SIRT5Q9NXA8 310 aa15.61■□□□□ 0.09
C9orf3-206ENST00000428313 SEC14L4Q9UDX3 406 aa15.61■□□□□ 0.09
C9orf3-206ENST00000428313 ACSL5Q9ULC5 683 aa15.61■□□□□ 0.09
C9orf3-206ENST00000428313 RIMKLBQ9ULI2 386 aa15.61■□□□□ 0.09
C9orf3-206ENST00000428313 RNF112Q9ULX5 631 aa15.61■□□□□ 0.09
C9orf3-206ENST00000428313 PRELID3BQ9Y3B1 194 aa15.61■□□□□ 0.09
C9orf3-206ENST00000428313 POLR3HQ9Y535 204 aaPredicted RBP15.61■□□□□ 0.09
C9orf3-206ENST00000428313 FAM170BA6NMN3 283 aa15.6■□□□□ 0.09
C9orf3-206ENST00000428313 GABRDO14764 452 aa15.6■□□□□ 0.09
C9orf3-206ENST00000428313 C9P02748 559 aa15.6■□□□□ 0.09
C9orf3-206ENST00000428313 FHP07954 510 aa15.6■□□□□ 0.09
C9orf3-206ENST00000428313 GABRB1P18505 474 aa15.6■□□□□ 0.09
C9orf3-206ENST00000428313 ITGA1P56199 1179 aa15.6■□□□□ 0.09
C9orf3-206ENST00000428313 TIAL1Q01085 375 aaKnown RBP eCLIP15.6■□□□□ 0.09
C9orf3-206ENST00000428313 SP2Q02086 613 aa15.6■□□□□ 0.09
C9orf3-206ENST00000428313 MED22Q15528 200 aa15.6■□□□□ 0.09
C9orf3-206ENST00000428313 SLC10A6Q3KNW5 377 aa15.6■□□□□ 0.09
C9orf3-206ENST00000428313 HSDL2Q6YN16 418 aa15.6■□□□□ 0.09
C9orf3-206ENST00000428313 CFAP77Q6ZQR2 320 aa15.6■□□□□ 0.09
C9orf3-206ENST00000428313 C1orf52Q8N6N3 182 aaKnown RBP15.6■□□□□ 0.09
C9orf3-206ENST00000428313 C19orf18Q8NEA5 215 aa15.6■□□□□ 0.09
C9orf3-206ENST00000428313 UPRTQ96BW1 309 aa15.6■□□□□ 0.09
C9orf3-206ENST00000428313 SGTBQ96EQ0 304 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms