RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 INVSQ9Y283 1065 aa5□□□□□ -1.61
RIF1-203ENST00000428287 PRR23AA6NEV1 266 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 TUBAL3A6NHL2 446 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 H7C0S8 307 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 NOBOXO60393 691 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 STAG3L1P0CL83 205 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 LCP1P13796 627 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 UBA1P22314 1058 aaKnown RBP4.99□□□□□ -1.61
RIF1-203ENST00000428287 ARSDP51689 593 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 CDKN2DP55273 166 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 BTG1P62324 171 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 MTAPQ13126 283 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 CAMK2DQ13557 499 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 BOP1Q14137 746 aaKnown RBP4.99□□□□□ -1.61
RIF1-203ENST00000428287 PCBP2Q15366 365 aaKnown RBP eCLIP4.99□□□□□ -1.61
RIF1-203ENST00000428287 ARMC4Q5T2S8 1044 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 SHEQ5VZ18 495 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 AFMIDQ63HM1 303 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 AHSA2Q719I0 299 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 PRICKLE2Q7Z3G6 844 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 ASPGQ86U10 573 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 SLC13A3Q8WWT9 602 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 RPRD1AQ96P16 312 aaPredicted RBP4.99□□□□□ -1.61
RIF1-203ENST00000428287 RNF121Q9H920 327 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 ZNF275Q9NSD4 429 aaPredicted RBP4.99□□□□□ -1.61
RIF1-203ENST00000428287 C1orf109Q9NX04 203 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 LYARQ9NX58 379 aaKnown RBP4.99□□□□□ -1.61
RIF1-203ENST00000428287 SAMD4AQ9UPU9 718 aaKnown RBP4.99□□□□□ -1.61
RIF1-203ENST00000428287 PADI2Q9Y2J8 665 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 CPAMD8Q8IZJ3 1885 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 SLC22A5O76082 557 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 SNAPINO95295 136 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 CALCRP30988 508 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 ETV1P50549 477 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 MAB21L1Q13394 359 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 PCBP1Q15365 356 aaKnown RBP eCLIP4.99□□□□□ -1.61
RIF1-203ENST00000428287 RAB41Q5JT25 222 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 KIF18BQ86Y91 864 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 OR52B6Q8NGF0 335 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 ITCHQ96J02 903 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 AARSD1Q9BTE6 412 aaKnown RBP4.99□□□□□ -1.61
RIF1-203ENST00000428287 DUSP16Q9BY84 665 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 REXO4Q9GZR2 422 aaKnown RBP4.99□□□□□ -1.61
RIF1-203ENST00000428287 RACGAP1Q9H0H5 632 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 SIK2Q9H0K1 926 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 PIGUQ9H490 435 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 ZNF112Q9UJU3 913 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 KCNK7Q9Y2U2 307 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 NCKAP5O14513 1909 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 A0A087WZ62 844 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 KRT87PA6NCN2 255 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 RHOBTB1O94844 696 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 C1SP09871 688 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 MYCLP12524 364 aaPredicted RBP4.99□□□□□ -1.61
RIF1-203ENST00000428287 ACPPP15309 386 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 CRYBB2P43320 205 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 SOX9P48436 509 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 GMPSP49915 693 aaPredicted RBP4.99□□□□□ -1.61
RIF1-203ENST00000428287 PSPHP78330 225 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 FAM174BQ3ZCQ3 159 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 SYPL2Q5VXT5 272 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 ALG1LQ6GMV1 187 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 DNAJA4Q8WW22 397 aaPredicted RBP4.99□□□□□ -1.61
RIF1-203ENST00000428287 CRELD1Q96HD1 420 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 NSUN5Q96P11 429 aaKnown RBP4.99□□□□□ -1.61
RIF1-203ENST00000428287 CD244Q9BZW8 370 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 SPNS1Q9H2V7 528 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 ALG9Q9H6U8 611 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 SIRT5Q9NXA8 310 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 GALPQ9UBC7 116 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 OR12D3Q9UGF7 316 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 ASB1Q9Y576 335 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 GMPPBQ9Y5P6 360 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 TET2Q6N021 2002 aaPredicted RBP4.99□□□□□ -1.61
RIF1-203ENST00000428287 INO80B-WBP1J3KQ70 363 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 PTHP01270 115 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 HMBSP08397 361 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 CSF3P09919 207 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 IRS1P35568 1242 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 SOX6P35712 828 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 IL12RB1P42701 662 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 MAP2K4P45985 399 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 RENBPP51606 427 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 WNT3AP56704 352 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 OR4D1Q15615 310 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 CARD16Q5EG05 197 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 SAXO2Q658L1 398 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 ERICH5Q6P6B1 374 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 TSEN54Q7Z6J9 526 aaKnown RBP4.99□□□□□ -1.61
RIF1-203ENST00000428287 SYTL1Q8IYJ3 562 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 OR10T2Q8NGX3 314 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 REPS1Q96D71 796 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 TEPSINQ96N21 525 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 TTYH2Q9BSA4 534 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 OR51E2Q9H255 320 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 SCPEP1Q9HB40 452 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 SLC25A19Q9HC21 320 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 CSNK1G1Q9HCP0 422 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 DPP3Q9NY33 737 aa4.99□□□□□ -1.61
RIF1-203ENST00000428287 RABL2AQ9UBK7 228 aaPredicted RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms