RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 ARHGAP19Q14CB8 494 aa12.16□□□□□ -0.46
SGCE-203ENST00000425444 PLEKHN1Q494U1 663 aaPredicted RBP12.16□□□□□ -0.46
SGCE-203ENST00000425444 NKAIN1Q4KMZ8 207 aa12.16□□□□□ -0.46
SGCE-203ENST00000425444 THEMIS2Q5TEJ8 643 aa12.16□□□□□ -0.46
SGCE-203ENST00000425444 LRRC8EQ6NSJ5 796 aa12.16□□□□□ -0.46
SGCE-203ENST00000425444 HIBCHQ6NVY1 386 aaPredicted RBP12.16□□□□□ -0.46
SGCE-203ENST00000425444 KIAA0408Q6ZU52 694 aa12.16□□□□□ -0.46
SGCE-203ENST00000425444 UBE2R2Q712K3 238 aaPredicted RBP12.16□□□□□ -0.46
SGCE-203ENST00000425444 PIWIL4Q7Z3Z4 852 aaKnown RBP12.16□□□□□ -0.46
SGCE-203ENST00000425444 ADCK2Q7Z695 626 aa12.16□□□□□ -0.46
SGCE-203ENST00000425444 HPS6Q86YV9 775 aa12.16□□□□□ -0.46
SGCE-203ENST00000425444 SPNS2Q8IVW8 549 aa12.16□□□□□ -0.46
SGCE-203ENST00000425444 PALM2Q8IXS6 379 aa12.16□□□□□ -0.46
SGCE-203ENST00000425444 PPFIBP2Q8ND30 876 aa12.16□□□□□ -0.46
SGCE-203ENST00000425444 PWWP2AQ96N64 755 aa12.16□□□□□ -0.46
SGCE-203ENST00000425444 PKP4Q99569 1192 aa12.16□□□□□ -0.46
SGCE-203ENST00000425444 DPH7Q9BTV6 452 aa12.16□□□□□ -0.46
SGCE-203ENST00000425444 MRPS30Q9NP92 439 aaKnown RBP12.16□□□□□ -0.46
SGCE-203ENST00000425444 CUTCQ9NTM9 273 aa12.16□□□□□ -0.46
SGCE-203ENST00000425444 TAS2R13Q9NYV9 303 aa12.16□□□□□ -0.46
SGCE-203ENST00000425444 SLC17A6Q9P2U8 582 aa12.16□□□□□ -0.46
SGCE-203ENST00000425444 TAC3Q9UHF0 121 aa12.16□□□□□ -0.46
SGCE-203ENST00000425444 PABPN1LA6NDY0 278 aaKnown RBP12.15□□□□□ -0.46
SGCE-203ENST00000425444 A6NL46 340 aa12.15□□□□□ -0.46
SGCE-203ENST00000425444 EIF3FO00303 357 aaPredicted RBP12.15□□□□□ -0.46
SGCE-203ENST00000425444 NDC80O14777 642 aa12.15□□□□□ -0.46
SGCE-203ENST00000425444 DSCR3O14972 297 aa12.15□□□□□ -0.46
SGCE-203ENST00000425444 ZG16O60844 167 aa12.15□□□□□ -0.46
SGCE-203ENST00000425444 CTSVO60911 334 aa12.15□□□□□ -0.46
SGCE-203ENST00000425444 SNRNP200O75643 2136 aaKnown RBP12.15□□□□□ -0.46
SGCE-203ENST00000425444 SEC31AO94979 1220 aaKnown RBP12.15□□□□□ -0.46
SGCE-203ENST00000425444 SLC16A8O95907 504 aa12.15□□□□□ -0.46
SGCE-203ENST00000425444 PIM1P11309 404 aaPredicted RBP12.15□□□□□ -0.46
SGCE-203ENST00000425444 RRADP55042 308 aa12.15□□□□□ -0.46
SGCE-203ENST00000425444 ATP1A4Q13733 1029 aa12.15□□□□□ -0.46
SGCE-203ENST00000425444 WASHC2DQ5SRD0 308 aa12.15□□□□□ -0.46
SGCE-203ENST00000425444 RBM20Q5T481 1227 aaKnown RBP12.15□□□□□ -0.46
SGCE-203ENST00000425444 YOD1Q5VVQ6 348 aaPredicted RBP12.15□□□□□ -0.46
SGCE-203ENST00000425444 RNF44Q7L0R7 432 aa12.15□□□□□ -0.46
SGCE-203ENST00000425444 ANKMY2Q8IV38 441 aa12.15□□□□□ -0.46
SGCE-203ENST00000425444 IGDCC3Q8IVU1 814 aa12.15□□□□□ -0.46
SGCE-203ENST00000425444 CNTN4Q8IWV2 1026 aa12.15□□□□□ -0.46
SGCE-203ENST00000425444 MYO1HQ8N1T3 1032 aa12.15□□□□□ -0.46
SGCE-203ENST00000425444 METTL27Q8N6F8 245 aaPredicted RBP12.15□□□□□ -0.46
SGCE-203ENST00000425444 GPATCH11Q8N954 259 aa12.15□□□□□ -0.46
SGCE-203ENST00000425444 FBXO15Q8NCQ5 510 aaPredicted RBP12.15□□□□□ -0.46
SGCE-203ENST00000425444 FDCSPQ8NFU4 85 aa12.15□□□□□ -0.46
SGCE-203ENST00000425444 ADAMTS17Q8TE56 1095 aa12.15□□□□□ -0.46
SGCE-203ENST00000425444 ZNF480Q8WV37 535 aa12.15□□□□□ -0.46
SGCE-203ENST00000425444 ASB11Q8WXH4 323 aa12.15□□□□□ -0.46
SGCE-203ENST00000425444 LRRC39Q96DD0 335 aa12.15□□□□□ -0.46
SGCE-203ENST00000425444 ZFYVE21Q9BQ24 234 aa12.15□□□□□ -0.46
SGCE-203ENST00000425444 NUDT9Q9BW91 350 aa12.15□□□□□ -0.46
SGCE-203ENST00000425444 SLC6A20Q9NP91 592 aa12.15□□□□□ -0.46
SGCE-203ENST00000425444 UTP6Q9NYH9 597 aaKnown RBP12.15□□□□□ -0.46
SGCE-203ENST00000425444 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.15□□□□□ -0.46
SGCE-203ENST00000425444 OR2A25A4D2G3 310 aa12.14□□□□□ -0.47
SGCE-203ENST00000425444 PEX12O00623 359 aa12.14□□□□□ -0.47
SGCE-203ENST00000425444 NRP2O60462 931 aa12.14□□□□□ -0.47
SGCE-203ENST00000425444 SRPX2O60687 465 aaPredicted RBP12.14□□□□□ -0.47
SGCE-203ENST00000425444 CEACAM4O75871 244 aa12.14□□□□□ -0.47
SGCE-203ENST00000425444 ITGA3P26006 1051 aa12.14□□□□□ -0.47
SGCE-203ENST00000425444 CASQ1P31415 396 aa12.14□□□□□ -0.47
SGCE-203ENST00000425444 SKIV2L2P42285 1042 aaKnown RBP12.14□□□□□ -0.47
SGCE-203ENST00000425444 YBX1P67809 324 aaKnown RBP12.14□□□□□ -0.47
SGCE-203ENST00000425444 MRPS25P82663 173 aaKnown RBP12.14□□□□□ -0.47
SGCE-203ENST00000425444 PDIA2Q13087 525 aaKnown RBP12.14□□□□□ -0.47
SGCE-203ENST00000425444 PDAP1Q13442 181 aaKnown RBP12.14□□□□□ -0.47
SGCE-203ENST00000425444 FAM214AQ32MH5 1076 aa12.14□□□□□ -0.47
SGCE-203ENST00000425444 ICE2Q659A1 982 aa12.14□□□□□ -0.47
SGCE-203ENST00000425444 FRMPD2BQ6IN97 320 aa12.14□□□□□ -0.47
SGCE-203ENST00000425444 MRPL14Q6P1L8 145 aaKnown RBP12.14□□□□□ -0.47
SGCE-203ENST00000425444 TMEM102Q8N9M5 508 aaPredicted RBP12.14□□□□□ -0.47
SGCE-203ENST00000425444 OR2Y1Q8NGV0 311 aa12.14□□□□□ -0.47
SGCE-203ENST00000425444 EEF1AKMT1Q8WVE0 214 aa12.14□□□□□ -0.47
SGCE-203ENST00000425444 CCDC177Q9NQR7 707 aaPredicted RBP12.14□□□□□ -0.47
SGCE-203ENST00000425444 ZFATQ9P243 1243 aa12.14□□□□□ -0.47
SGCE-203ENST00000425444 SNX24Q9Y343 169 aa12.14□□□□□ -0.47
SGCE-203ENST00000425444 KLK4Q9Y5K2 254 aa12.14□□□□□ -0.47
SGCE-203ENST00000425444 COPG1Q9Y678 874 aaKnown RBP12.14□□□□□ -0.47
SGCE-203ENST00000425444 FITM1A5D6W6 292 aa12.13□□□□□ -0.47
SGCE-203ENST00000425444 E7ENX8 843 aa12.13□□□□□ -0.47
SGCE-203ENST00000425444 GFYI3L273 518 aa12.13□□□□□ -0.47
SGCE-203ENST00000425444 FANCGO15287 622 aa12.13□□□□□ -0.47
SGCE-203ENST00000425444 KLF7O75840 302 aaPredicted RBP12.13□□□□□ -0.47
SGCE-203ENST00000425444 AHSGP02765 367 aa12.13□□□□□ -0.47
SGCE-203ENST00000425444 C8GP07360 202 aa12.13□□□□□ -0.47
SGCE-203ENST00000425444 GABRB3P28472 473 aa12.13□□□□□ -0.47
SGCE-203ENST00000425444 IMPA1P29218 277 aa12.13□□□□□ -0.47
SGCE-203ENST00000425444 RPL21P46778 160 aaKnown RBP12.13□□□□□ -0.47
SGCE-203ENST00000425444 GCGRP47871 477 aa12.13□□□□□ -0.47
SGCE-203ENST00000425444 CDKN2DP55273 166 aa12.13□□□□□ -0.47
SGCE-203ENST00000425444 FOXL2P58012 376 aa12.13□□□□□ -0.47
SGCE-203ENST00000425444 TAP2Q03519 686 aa12.13□□□□□ -0.47
SGCE-203ENST00000425444 PRDX1Q06830 199 aaKnown RBP12.13□□□□□ -0.47
SGCE-203ENST00000425444 CALCOCO2Q13137 446 aa12.13□□□□□ -0.47
SGCE-203ENST00000425444 SP140Q13342 867 aa12.13□□□□□ -0.47
SGCE-203ENST00000425444 SSPNQ14714 243 aa12.13□□□□□ -0.47
SGCE-203ENST00000425444 TESK1Q15569 626 aa12.13□□□□□ -0.47
SGCE-203ENST00000425444 TEDDM1Q5T9Z0 273 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms