RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 SDCCAG3Q96C92 435 aa15.83■□□□□ 0.12
CHCHD3-202ENST00000423635 CYTH2Q99418 400 aa15.83■□□□□ 0.12
CHCHD3-202ENST00000423635 FAM118BQ9BPY3 351 aa15.83■□□□□ 0.12
CHCHD3-202ENST00000423635 PLCD4Q9BRC7 762 aa15.83■□□□□ 0.12
CHCHD3-202ENST00000423635 UTP23Q9BRU9 249 aaKnown RBP15.83■□□□□ 0.12
CHCHD3-202ENST00000423635 HES7Q9BYE0 225 aa15.83■□□□□ 0.12
CHCHD3-202ENST00000423635 OSBPL8Q9BZF1 889 aa15.83■□□□□ 0.12
CHCHD3-202ENST00000423635 TSPAN10Q9H1Z9 355 aaPredicted RBP15.83■□□□□ 0.12
CHCHD3-202ENST00000423635 SYNPO2LQ9H987 977 aa15.83■□□□□ 0.12
CHCHD3-202ENST00000423635 KLHL1Q9NR64 748 aa15.83■□□□□ 0.12
CHCHD3-202ENST00000423635 ABHD10Q9NUJ1 306 aa15.83■□□□□ 0.12
CHCHD3-202ENST00000423635 COQ3Q9NZJ6 369 aa15.83■□□□□ 0.12
CHCHD3-202ENST00000423635 RIMKLBQ9ULI2 386 aa15.83■□□□□ 0.12
CHCHD3-202ENST00000423635 TTC7AQ9ULT0 858 aaPredicted RBP15.83■□□□□ 0.12
CHCHD3-202ENST00000423635 ASB1Q9Y576 335 aa15.83■□□□□ 0.12
CHCHD3-202ENST00000423635 FOXO6A8MYZ6 492 aa15.82■□□□□ 0.12
CHCHD3-202ENST00000423635 VPS26AO75436 327 aa15.82■□□□□ 0.12
CHCHD3-202ENST00000423635 TSPAN12O95859 305 aa15.82■□□□□ 0.12
CHCHD3-202ENST00000423635 CD46P15529 392 aa15.82■□□□□ 0.12
CHCHD3-202ENST00000423635 CMPK1P30085 196 aa15.82■□□□□ 0.12
CHCHD3-202ENST00000423635 PPARGP37231 505 aaPredicted RBP15.82■□□□□ 0.12
CHCHD3-202ENST00000423635 ACVR1Q04771 509 aa15.82■□□□□ 0.12
CHCHD3-202ENST00000423635 FAM53BQ14153 422 aa15.82■□□□□ 0.12
CHCHD3-202ENST00000423635 OR1C1Q15619 314 aa15.82■□□□□ 0.12
CHCHD3-202ENST00000423635 SYT16Q17RD7 645 aa15.82■□□□□ 0.12
CHCHD3-202ENST00000423635 CCDC38Q502W7 563 aa15.82■□□□□ 0.12
CHCHD3-202ENST00000423635 SPINK14Q6IE38 97 aa15.82■□□□□ 0.12
CHCHD3-202ENST00000423635 KRT222Q8N1A0 295 aa15.82■□□□□ 0.12
CHCHD3-202ENST00000423635 DNAAF3Q8N9W5 541 aa15.82■□□□□ 0.12
CHCHD3-202ENST00000423635 TMEM178AQ8NBL3 297 aa15.82■□□□□ 0.12
CHCHD3-202ENST00000423635 OR4L1Q8NH43 312 aa15.82■□□□□ 0.12
CHCHD3-202ENST00000423635 OR2A5Q96R48 311 aa15.82■□□□□ 0.12
CHCHD3-202ENST00000423635 SPATA7Q9P0W8 599 aa15.82■□□□□ 0.12
CHCHD3-202ENST00000423635 PCDHA3Q9Y5H8 950 aa15.82■□□□□ 0.12
CHCHD3-202ENST00000423635 NFS1Q9Y697 457 aa15.82■□□□□ 0.12
CHCHD3-202ENST00000423635 A0A0A6YYC8 382 aaPredicted RBP15.81■□□□□ 0.12
CHCHD3-202ENST00000423635 MACROD2A1Z1Q3 448 aa15.81■□□□□ 0.12
CHCHD3-202ENST00000423635 I3L1I5 382 aaPredicted RBP15.81■□□□□ 0.12
CHCHD3-202ENST00000423635 CDK2AP1O14519 115 aa15.81■□□□□ 0.12
CHCHD3-202ENST00000423635 PRRG2O14669 202 aa15.81■□□□□ 0.12
CHCHD3-202ENST00000423635 FAM155BO75949 473 aa15.81■□□□□ 0.12
CHCHD3-202ENST00000423635 SEC24DO94855 1032 aaPredicted RBP15.81■□□□□ 0.12
CHCHD3-202ENST00000423635 SP1P08047 785 aa15.81■□□□□ 0.12
CHCHD3-202ENST00000423635 CCNFP41002 786 aa15.81■□□□□ 0.12
CHCHD3-202ENST00000423635 RELAQ04206 551 aa15.81■□□□□ 0.12
CHCHD3-202ENST00000423635 FASTKQ14296 549 aaKnown RBP15.81■□□□□ 0.12
CHCHD3-202ENST00000423635 SEMA3AQ14563 771 aa15.81■□□□□ 0.12
CHCHD3-202ENST00000423635 TMED2Q15363 201 aa15.81■□□□□ 0.12
CHCHD3-202ENST00000423635 BTBD16Q32M84 506 aa15.81■□□□□ 0.12
CHCHD3-202ENST00000423635 FCRLBQ6BAA4 426 aa15.81■□□□□ 0.12
CHCHD3-202ENST00000423635 C11orf63Q6NUN7 778 aa15.81■□□□□ 0.12
CHCHD3-202ENST00000423635 LINC00523Q86TU6 105 aa15.81■□□□□ 0.12
CHCHD3-202ENST00000423635 PAQR7Q86WK9 346 aa15.81■□□□□ 0.12
CHCHD3-202ENST00000423635 CRLF3Q8IUI8 442 aa15.81■□□□□ 0.12
CHCHD3-202ENST00000423635 MMP21Q8N119 569 aa15.81■□□□□ 0.12
CHCHD3-202ENST00000423635 FAM98AQ8NCA5 519 aaKnown RBP15.81■□□□□ 0.12
CHCHD3-202ENST00000423635 M1APQ8TC57 530 aa15.81■□□□□ 0.12
CHCHD3-202ENST00000423635 MAGEC3Q8TD91 643 aa15.81■□□□□ 0.12
CHCHD3-202ENST00000423635 MRFAP1L1Q96HT8 127 aa15.81■□□□□ 0.12
CHCHD3-202ENST00000423635 NPAS2Q99743 824 aa15.81■□□□□ 0.12
CHCHD3-202ENST00000423635 VN1R1Q9GZP7 353 aa15.81■□□□□ 0.12
CHCHD3-202ENST00000423635 DRC3Q9H069 523 aa15.81■□□□□ 0.12
CHCHD3-202ENST00000423635 CXXC4Q9H2H0 198 aa15.81■□□□□ 0.12
CHCHD3-202ENST00000423635 SLC2A6Q9UGQ3 507 aa15.81■□□□□ 0.12
CHCHD3-202ENST00000423635 PPT2Q9UMR5 302 aa15.81■□□□□ 0.12
CHCHD3-202ENST00000423635 IGHV3-20A0A0C4DH32 117 aa15.8■□□□□ 0.12
CHCHD3-202ENST00000423635 IGKV1-8A0A0C4DH67 115 aa15.8■□□□□ 0.12
CHCHD3-202ENST00000423635 KRT87PA6NCN2 255 aa15.8■□□□□ 0.12
CHCHD3-202ENST00000423635 GOLGA6L19H0YKK7 550 aa15.8■□□□□ 0.12
CHCHD3-202ENST00000423635 TXNDC9O14530 226 aa15.8■□□□□ 0.12
CHCHD3-202ENST00000423635 PRMT5O14744 637 aaPredicted RBP15.8■□□□□ 0.12
CHCHD3-202ENST00000423635 ZNHIT1O43257 154 aa15.8■□□□□ 0.12
CHCHD3-202ENST00000423635 NEURL1O76050 574 aa15.8■□□□□ 0.12
CHCHD3-202ENST00000423635 TPM3P06753 285 aa15.8■□□□□ 0.12
CHCHD3-202ENST00000423635 ERGP11308 486 aa15.8■□□□□ 0.12
CHCHD3-202ENST00000423635 PKMP14618 531 aaKnown RBP15.8■□□□□ 0.12
CHCHD3-202ENST00000423635 DNAJA1P31689 397 aaKnown RBP15.8■□□□□ 0.12
CHCHD3-202ENST00000423635 CTNNA1P35221 906 aaKnown RBP15.8■□□□□ 0.12
CHCHD3-202ENST00000423635 BDKRB1P46663 353 aa15.8■□□□□ 0.12
CHCHD3-202ENST00000423635 P3H1Q32P28 736 aa15.8■□□□□ 0.12
CHCHD3-202ENST00000423635 FASTKD1Q53R41 847 aaKnown RBP15.8■□□□□ 0.12
CHCHD3-202ENST00000423635 TSTD2Q5T7W7 516 aa15.8■□□□□ 0.12
CHCHD3-202ENST00000423635 SLC25A25Q6KCM7 469 aa15.8■□□□□ 0.12
CHCHD3-202ENST00000423635 GALNTL5Q7Z4T8 443 aa15.8■□□□□ 0.12
CHCHD3-202ENST00000423635 FGD2Q7Z6J4 655 aa15.8■□□□□ 0.12
CHCHD3-202ENST00000423635 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.8■□□□□ 0.12
CHCHD3-202ENST00000423635 HORMAD2Q8N7B1 307 aa15.8■□□□□ 0.12
CHCHD3-202ENST00000423635 GSDMBQ8TAX9 411 aa15.8■□□□□ 0.12
CHCHD3-202ENST00000423635 PANX3Q96QZ0 392 aa15.8■□□□□ 0.12
CHCHD3-202ENST00000423635 KCNK13Q9HB14 408 aa15.8■□□□□ 0.12
CHCHD3-202ENST00000423635 MRPS30Q9NP92 439 aaKnown RBP15.8■□□□□ 0.12
CHCHD3-202ENST00000423635 ANKRD10Q9NXR5 420 aa15.8■□□□□ 0.12
CHCHD3-202ENST00000423635 C19orf25Q9UFG5 118 aaPredicted RBP15.8■□□□□ 0.12
CHCHD3-202ENST00000423635 GTF3C3Q9Y5Q9 886 aa15.8■□□□□ 0.12
CHCHD3-202ENST00000423635 PRRC2AP48634 2157 aaKnown RBP15.79■□□□□ 0.12
CHCHD3-202ENST00000423635 A0A0U1RQJ8 604 aa15.79■□□□□ 0.12
CHCHD3-202ENST00000423635 SOWAHDA6NJG2 315 aa15.79■□□□□ 0.12
CHCHD3-202ENST00000423635 H0YIG0 161 aa15.79■□□□□ 0.12
CHCHD3-202ENST00000423635 KPNA5O15131 536 aa15.79■□□□□ 0.12
CHCHD3-202ENST00000423635 SUN1O94901 812 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms