RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 NRDCO43847 1150 aa15.36■□□□□ 0.05
COL18A1-205ENST00000423214 PSIP1O75475 530 aaKnown RBP15.36■□□□□ 0.05
COL18A1-205ENST00000423214 KLHL18O94889 574 aa15.36■□□□□ 0.05
COL18A1-205ENST00000423214 SYF2O95926 243 aaKnown RBP15.36■□□□□ 0.05
COL18A1-205ENST00000423214 PRR35P0CG20 571 aa15.36■□□□□ 0.05
COL18A1-205ENST00000423214 PKMP14618 531 aaKnown RBP15.36■□□□□ 0.05
COL18A1-205ENST00000423214 EZRP15311 586 aaKnown RBP15.36■□□□□ 0.05
COL18A1-205ENST00000423214 HSD17B2P37059 387 aa15.36■□□□□ 0.05
COL18A1-205ENST00000423214 KCNJ1P48048 391 aa15.36■□□□□ 0.05
COL18A1-205ENST00000423214 AP2B1P63010 937 aa15.36■□□□□ 0.05
COL18A1-205ENST00000423214 INAQ16352 499 aa15.36■□□□□ 0.05
COL18A1-205ENST00000423214 HKDC1Q2TB90 917 aa15.36■□□□□ 0.05
COL18A1-205ENST00000423214 ACSBG2Q5FVE4 666 aa15.36■□□□□ 0.05
COL18A1-205ENST00000423214 GARNL3Q5VVW2 1013 aa15.36■□□□□ 0.05
COL18A1-205ENST00000423214 ICE2Q659A1 982 aa15.36■□□□□ 0.05
COL18A1-205ENST00000423214 RPUSD3Q6P087 351 aaKnown RBP15.36■□□□□ 0.05
COL18A1-205ENST00000423214 PAQR7Q86WK9 346 aa15.36■□□□□ 0.05
COL18A1-205ENST00000423214 SIRT6Q8N6T7 355 aa15.36■□□□□ 0.05
COL18A1-205ENST00000423214 SLX1AQ9BQ83 275 aa15.36■□□□□ 0.05
COL18A1-205ENST00000423214 DRC3Q9H069 523 aa15.36■□□□□ 0.05
COL18A1-205ENST00000423214 CCDC68Q9H2F9 335 aa15.36■□□□□ 0.05
COL18A1-205ENST00000423214 MKKSQ9NPJ1 570 aaPredicted RBP15.36■□□□□ 0.05
COL18A1-205ENST00000423214 INTS10Q9NVR2 710 aaKnown RBP15.36■□□□□ 0.05
COL18A1-205ENST00000423214 ABCA12Q86UK0 2595 aa15.36■□□□□ 0.05
COL18A1-205ENST00000423214 IGHV1-45A0A0A0MS14 117 aa15.35■□□□□ 0.05
COL18A1-205ENST00000423214 TRAV17A0A0B4J275 112 aa15.35■□□□□ 0.05
COL18A1-205ENST00000423214 TXNDC9O14530 226 aa15.35■□□□□ 0.05
COL18A1-205ENST00000423214 JRKO75564 520 aa15.35■□□□□ 0.05
COL18A1-205ENST00000423214 WFS1O76024 890 aa15.35■□□□□ 0.05
COL18A1-205ENST00000423214 SERPINA7P05543 415 aa15.35■□□□□ 0.05
COL18A1-205ENST00000423214 VPS41P49754 854 aa15.35■□□□□ 0.05
COL18A1-205ENST00000423214 THEMIS2Q5TEJ8 643 aa15.35■□□□□ 0.05
COL18A1-205ENST00000423214 ATG9BQ674R7 924 aa15.35■□□□□ 0.05
COL18A1-205ENST00000423214 ZNF470Q6ECI4 717 aa15.35■□□□□ 0.05
COL18A1-205ENST00000423214 LAPTM4BQ86VI4 370 aa15.35■□□□□ 0.05
COL18A1-205ENST00000423214 CILP2Q8IUL8 1156 aa15.35■□□□□ 0.05
COL18A1-205ENST00000423214 PPFIBP2Q8ND30 876 aa15.35■□□□□ 0.05
COL18A1-205ENST00000423214 CATSPER1Q8NEC5 780 aa15.35■□□□□ 0.05
COL18A1-205ENST00000423214 ZNF669Q96BR6 464 aaPredicted RBP15.35■□□□□ 0.05
COL18A1-205ENST00000423214 TRIM56Q9BRZ2 755 aaKnown RBP15.35■□□□□ 0.05
COL18A1-205ENST00000423214 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.35■□□□□ 0.054e-7■■■■□ 23.1
COL18A1-205ENST00000423214 LRBAP50851 2863 aa15.35■□□□□ 0.05
COL18A1-205ENST00000423214 IGKV1-8A0A0C4DH67 115 aa15.34■□□□□ 0.05
COL18A1-205ENST00000423214 A0A1B0GUH1 482 aa15.34■□□□□ 0.05
COL18A1-205ENST00000423214 TCRBV7S3A2A0A539 114 aa15.34■□□□□ 0.05
COL18A1-205ENST00000423214 CTAGE9A4FU28 777 aa15.34■□□□□ 0.05
COL18A1-205ENST00000423214 SMAPO00193 183 aa15.34■□□□□ 0.05
COL18A1-205ENST00000423214 ZG16O60844 167 aa15.34■□□□□ 0.05
COL18A1-205ENST00000423214 BMP10O95393 424 aa15.34■□□□□ 0.05
COL18A1-205ENST00000423214 SLC16A8O95907 504 aa15.34■□□□□ 0.05
COL18A1-205ENST00000423214 SOX11P35716 441 aa15.34■□□□□ 0.05
COL18A1-205ENST00000423214 PRDX1Q06830 199 aaKnown RBP15.34■□□□□ 0.05
COL18A1-205ENST00000423214 THOC5Q13769 683 aaKnown RBP15.34■□□□□ 0.05
COL18A1-205ENST00000423214 DHX34Q14147 1143 aaKnown RBP15.34■□□□□ 0.05
COL18A1-205ENST00000423214 KCNJ11Q14654 390 aa15.34■□□□□ 0.05
COL18A1-205ENST00000423214 TRIP13Q15645 432 aaPredicted RBP15.34■□□□□ 0.05
COL18A1-205ENST00000423214 NDUFA9Q16795 377 aa15.34■□□□□ 0.05
COL18A1-205ENST00000423214 ARMC3Q5W041 872 aa15.34■□□□□ 0.05
COL18A1-205ENST00000423214 FBXO42Q6P3S6 717 aa15.34■□□□□ 0.05
COL18A1-205ENST00000423214 RIPOR1Q6ZS17 1223 aa15.34■□□□□ 0.05
COL18A1-205ENST00000423214 NEK10Q6ZWH5 1172 aa15.34■□□□□ 0.05
COL18A1-205ENST00000423214 FJX1Q86VR8 437 aa15.34■□□□□ 0.05
COL18A1-205ENST00000423214 SLC34A3Q8N130 599 aa15.34■□□□□ 0.05
COL18A1-205ENST00000423214 AMER3Q8N944 861 aa15.34■□□□□ 0.05
COL18A1-205ENST00000423214 SUN3Q8TAQ9 357 aa15.34■□□□□ 0.05
COL18A1-205ENST00000423214 PKP4Q99569 1192 aa15.34■□□□□ 0.05
COL18A1-205ENST00000423214 EBNA1BP2Q99848 306 aaKnown RBP15.34■□□□□ 0.05
COL18A1-205ENST00000423214 HOMER3Q9NSC5 361 aa15.34■□□□□ 0.05
COL18A1-205ENST00000423214 GALPQ9UBC7 116 aa15.34■□□□□ 0.05
COL18A1-205ENST00000423214 MRPS2Q9Y399 296 aaKnown RBP15.34■□□□□ 0.05
COL18A1-205ENST00000423214 A0A0A6YYC8 382 aaPredicted RBP15.33■□□□□ 0.04
COL18A1-205ENST00000423214 A0A1W2PQ72 361 aa15.33■□□□□ 0.04
COL18A1-205ENST00000423214 I3L1I5 382 aaPredicted RBP15.33■□□□□ 0.04
COL18A1-205ENST00000423214 HAT1O14929 419 aa15.33■□□□□ 0.04
COL18A1-205ENST00000423214 STSP08842 583 aa15.33■□□□□ 0.04
COL18A1-205ENST00000423214 SLC26A3P40879 764 aa15.33■□□□□ 0.04
COL18A1-205ENST00000423214 AVPR1BP47901 424 aa15.33■□□□□ 0.04
COL18A1-205ENST00000423214 TNFSF10P50591 281 aa15.33■□□□□ 0.04
COL18A1-205ENST00000423214 ABATP80404 500 aa15.33■□□□□ 0.04
COL18A1-205ENST00000423214 GPS1Q13098 491 aa15.33■□□□□ 0.04
COL18A1-205ENST00000423214 CUL1Q13616 776 aa15.33■□□□□ 0.04
COL18A1-205ENST00000423214 NAA30Q147X3 362 aaPredicted RBP15.33■□□□□ 0.04
COL18A1-205ENST00000423214 ZRSR2Q15696 482 aaKnown RBP15.33■□□□□ 0.04
COL18A1-205ENST00000423214 MFSD4BQ5TF39 518 aa15.33■□□□□ 0.04
COL18A1-205ENST00000423214 C1QL3Q5VWW1 255 aa15.33■□□□□ 0.04
COL18A1-205ENST00000423214 ZNF425Q6IV72 752 aa15.33■□□□□ 0.04
COL18A1-205ENST00000423214 NEPROQ6NW34 567 aa15.33■□□□□ 0.04
COL18A1-205ENST00000423214 CENPUQ71F23 418 aa15.33■□□□□ 0.04
COL18A1-205ENST00000423214 REXO1L1PQ8IX06 675 aa15.33■□□□□ 0.04
COL18A1-205ENST00000423214 NR4A3Q92570 626 aa15.33■□□□□ 0.04
COL18A1-205ENST00000423214 TGIF2Q9GZN2 237 aa15.33■□□□□ 0.04
COL18A1-205ENST00000423214 PLA2G3Q9NZ20 509 aa15.33■□□□□ 0.04
COL18A1-205ENST00000423214 MKL2Q9ULH7 1088 aa15.33■□□□□ 0.04
COL18A1-205ENST00000423214 PCNX1Q96RV3 2341 aa15.33■□□□□ 0.04
COL18A1-205ENST00000423214 P2RX6O15547 441 aa15.32■□□□□ 0.04
COL18A1-205ENST00000423214 AVILO75366 819 aa15.32■□□□□ 0.04
COL18A1-205ENST00000423214 F10P00742 488 aa15.32■□□□□ 0.04
COL18A1-205ENST00000423214 CELA2AP08217 269 aa15.32■□□□□ 0.04
COL18A1-205ENST00000423214 MPC1LP0DKB6 136 aa15.32■□□□□ 0.04
COL18A1-205ENST00000423214 ENO3P13929 434 aaPredicted RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms