RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 PAQR7Q86WK9 346 aa8.25□□□□□ -1.09
MDC1-204ENST00000422266 IQCKQ8N0W5 287 aa8.25□□□□□ -1.09
MDC1-204ENST00000422266 NKAPQ8N5F7 415 aaKnown RBP8.25□□□□□ -1.09
MDC1-204ENST00000422266 CAMKVQ8NCB2 501 aa8.25□□□□□ -1.09
MDC1-204ENST00000422266 GALNT11Q8NCW6 608 aa8.25□□□□□ -1.09
MDC1-204ENST00000422266 GIMAP7Q8NHV1 300 aa8.25□□□□□ -1.09
MDC1-204ENST00000422266 CPT1CQ8TCG5 803 aa8.25□□□□□ -1.09
MDC1-204ENST00000422266 EEF1AKMT1Q8WVE0 214 aa8.25□□□□□ -1.09
MDC1-204ENST00000422266 PDLIM5Q96HC4 596 aaKnown RBP8.25□□□□□ -1.09
MDC1-204ENST00000422266 AGAP4Q96P64 663 aa8.25□□□□□ -1.09
MDC1-204ENST00000422266 OR2A5Q96R48 311 aa8.25□□□□□ -1.09
MDC1-204ENST00000422266 SPSB2Q99619 263 aa8.25□□□□□ -1.09
MDC1-204ENST00000422266 SLC30A3Q99726 388 aa8.25□□□□□ -1.09
MDC1-204ENST00000422266 TRIM56Q9BRZ2 755 aaKnown RBP8.25□□□□□ -1.09
MDC1-204ENST00000422266 CRB3Q9BUF7 120 aa8.25□□□□□ -1.09
MDC1-204ENST00000422266 PHACTR1Q9C0D0 580 aa8.25□□□□□ -1.09
MDC1-204ENST00000422266 TGIF2Q9GZN2 237 aa8.25□□□□□ -1.09
MDC1-204ENST00000422266 RAB17Q9H0T7 212 aa8.25□□□□□ -1.09
MDC1-204ENST00000422266 EPS8L2Q9H6S3 715 aa8.25□□□□□ -1.09
MDC1-204ENST00000422266 SLC6A20Q9NP91 592 aa8.25□□□□□ -1.09
MDC1-204ENST00000422266 GALPQ9UBC7 116 aa8.25□□□□□ -1.09
MDC1-204ENST00000422266 B3GNT3Q9Y2A9 372 aa8.25□□□□□ -1.09
MDC1-204ENST00000422266 MED16Q9Y2X0 877 aa8.25□□□□□ -1.09
MDC1-204ENST00000422266 UTP11Q9Y3A2 253 aaKnown RBP8.25□□□□□ -1.09
MDC1-204ENST00000422266 TEX264Q9Y6I9 313 aa8.25□□□□□ -1.09
MDC1-204ENST00000422266 ANKRD12Q6UB98 2062 aa8.25□□□□□ -1.09
MDC1-204ENST00000422266 BSNQ9UPA5 3926 aa8.24□□□□□ -1.09
MDC1-204ENST00000422266 CFAP46Q8IYW2 2715 aa8.24□□□□□ -1.09
MDC1-204ENST00000422266 LOC105369274A0A096LPK9 316 aa8.24□□□□□ -1.09
MDC1-204ENST00000422266 LOC102723532A0A0G2JNH3 316 aa8.24□□□□□ -1.09
MDC1-204ENST00000422266 URADA6NGE7 173 aa8.24□□□□□ -1.09
MDC1-204ENST00000422266 TTI1O43156 1089 aa8.24□□□□□ -1.09
MDC1-204ENST00000422266 HPP00738 406 aa8.24□□□□□ -1.09
MDC1-204ENST00000422266 UMODP07911 640 aa8.24□□□□□ -1.09
MDC1-204ENST00000422266 GSTA2P09210 222 aa8.24□□□□□ -1.09
MDC1-204ENST00000422266 SLC35G6P0C7Q6 338 aa8.24□□□□□ -1.09
MDC1-204ENST00000422266 ACPPP15309 386 aa8.24□□□□□ -1.09
MDC1-204ENST00000422266 IL10P22301 178 aa8.24□□□□□ -1.09
MDC1-204ENST00000422266 ITGA3P26006 1051 aa8.24□□□□□ -1.09
MDC1-204ENST00000422266 CASQ1P31415 396 aa8.24□□□□□ -1.09
MDC1-204ENST00000422266 HPDP32754 393 aaPredicted RBP8.24□□□□□ -1.09
MDC1-204ENST00000422266 OR1D4P47884 311 aa8.24□□□□□ -1.09
MDC1-204ENST00000422266 HNMTP50135 292 aa8.24□□□□□ -1.09
MDC1-204ENST00000422266 TBPL1P62380 186 aa8.24□□□□□ -1.09
MDC1-204ENST00000422266 PDIA2Q13087 525 aaKnown RBP8.24□□□□□ -1.09
MDC1-204ENST00000422266 HECTD2Q5U5R9 776 aa8.24□□□□□ -1.09
MDC1-204ENST00000422266 JMJD6Q6NYC1 403 aaPredicted RBP8.24□□□□□ -1.09
MDC1-204ENST00000422266 AGTRAPQ6RW13 159 aa8.24□□□□□ -1.09
MDC1-204ENST00000422266 PAQR3Q6TCH7 311 aa8.24□□□□□ -1.09
MDC1-204ENST00000422266 LCTLQ6UWM7 567 aa8.24□□□□□ -1.09
MDC1-204ENST00000422266 RIPOR1Q6ZS17 1223 aa8.24□□□□□ -1.09
MDC1-204ENST00000422266 CYS1Q717R9 158 aa8.24□□□□□ -1.09
MDC1-204ENST00000422266 PIWIL4Q7Z3Z4 852 aaKnown RBP8.24□□□□□ -1.09
MDC1-204ENST00000422266 OR4N4Q8N0Y3 316 aa8.24□□□□□ -1.09
MDC1-204ENST00000422266 AGGF1Q8N302 714 aaeCLIP8.24□□□□□ -1.09
MDC1-204ENST00000422266 STT3BQ8TCJ2 826 aa8.24□□□□□ -1.09
MDC1-204ENST00000422266 PYROXD1Q8WU10 500 aa8.24□□□□□ -1.09
MDC1-204ENST00000422266 MIB2Q96AX9 1013 aa8.24□□□□□ -1.09
MDC1-204ENST00000422266 MMABQ96EY8 250 aaPredicted RBP8.24□□□□□ -1.09
MDC1-204ENST00000422266 LINGO1Q96FE5 620 aa8.24□□□□□ -1.09
MDC1-204ENST00000422266 TSPAN17Q96FV3 270 aa8.24□□□□□ -1.09
MDC1-204ENST00000422266 CFAP36Q96G28 342 aa8.24□□□□□ -1.09
MDC1-204ENST00000422266 NDNQ99608 321 aa8.24□□□□□ -1.09
MDC1-204ENST00000422266 NUDT9Q9BW91 350 aa8.24□□□□□ -1.09
MDC1-204ENST00000422266 YIPF2Q9BWQ6 316 aa8.24□□□□□ -1.09
MDC1-204ENST00000422266 LHPPQ9H008 270 aa8.24□□□□□ -1.09
MDC1-204ENST00000422266 POPDC3Q9HBV1 291 aa8.24□□□□□ -1.09
MDC1-204ENST00000422266 SLC22A11Q9NSA0 550 aa8.24□□□□□ -1.09
MDC1-204ENST00000422266 ARL15Q9NXU5 204 aa8.24□□□□□ -1.09
MDC1-204ENST00000422266 WHRNQ9P202 907 aa8.24□□□□□ -1.09
MDC1-204ENST00000422266 STOX2Q9P2F5 926 aaPredicted RBP8.24□□□□□ -1.09
MDC1-204ENST00000422266 TRPC4Q9UBN4 977 aa8.24□□□□□ -1.09
MDC1-204ENST00000422266 C19orf25Q9UFG5 118 aaPredicted RBP8.24□□□□□ -1.09
MDC1-204ENST00000422266 C3orf18Q9UK00 162 aa8.24□□□□□ -1.09
MDC1-204ENST00000422266 FBXL4Q9UKA2 621 aa8.24□□□□□ -1.09
MDC1-204ENST00000422266 NOVA2Q9UNW9 492 aaKnown RBP8.24□□□□□ -1.09
MDC1-204ENST00000422266 CHMP2BQ9UQN3 213 aa8.24□□□□□ -1.09
MDC1-204ENST00000422266 PDE10AQ9Y233 779 aa8.24□□□□□ -1.09
MDC1-204ENST00000422266 MAU2Q9Y6X3 613 aa8.24□□□□□ -1.09
MDC1-204ENST00000422266 SNRNP200O75643 2136 aaKnown RBP8.24□□□□□ -1.09
MDC1-204ENST00000422266 NSG1A0A0A6YYJ2 146 aa8.23□□□□□ -1.09
MDC1-204ENST00000422266 IGKV1-8A0A0C4DH67 115 aa8.23□□□□□ -1.09
MDC1-204ENST00000422266 ESPNB1AK53 854 aa8.23□□□□□ -1.09
MDC1-204ENST00000422266 E7ESA3 106 aa8.23□□□□□ -1.09
MDC1-204ENST00000422266 H7BY64 318 aa8.23□□□□□ -1.09
MDC1-204ENST00000422266 SORBS2O94875 1100 aaKnown RBP8.23□□□□□ -1.09
MDC1-204ENST00000422266 NSA2O95478 260 aaKnown RBP8.23□□□□□ -1.09
MDC1-204ENST00000422266 HEXBP07686 556 aa8.23□□□□□ -1.09
MDC1-204ENST00000422266 NR1D1P20393 614 aa8.23□□□□□ -1.09
MDC1-204ENST00000422266 SLC26A3P40879 764 aa8.23□□□□□ -1.09
MDC1-204ENST00000422266 CCR8P51685 355 aa8.23□□□□□ -1.09
MDC1-204ENST00000422266 EMP2P54851 167 aa8.23□□□□□ -1.09
MDC1-204ENST00000422266 CDKL1Q00532 357 aa8.23□□□□□ -1.09
MDC1-204ENST00000422266 KLC1Q07866 573 aa8.23□□□□□ -1.09
MDC1-204ENST00000422266 NAE1Q13564 534 aa8.23□□□□□ -1.09
MDC1-204ENST00000422266 PWP1Q13610 501 aa8.23□□□□□ -1.09
MDC1-204ENST00000422266 HERC3Q15034 1050 aa8.23□□□□□ -1.09
MDC1-204ENST00000422266 MSS51Q4VC12 460 aa8.23□□□□□ -1.09
MDC1-204ENST00000422266 SLC6A19Q695T7 634 aa8.23□□□□□ -1.09
MDC1-204ENST00000422266 KIRREL2Q6UWL6 708 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms