RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 BIN1O00499 593 aa8.44□□□□□ -1.06
TRIM39-206ENST00000420746 AQP7O14520 342 aa8.44□□□□□ -1.06
TRIM39-206ENST00000420746 NDC80O14777 642 aa8.44□□□□□ -1.06
TRIM39-206ENST00000420746 CD5LO43866 347 aa8.44□□□□□ -1.06
TRIM39-206ENST00000420746 PDE9AO76083 593 aa8.44□□□□□ -1.06
TRIM39-206ENST00000420746 SOX30O94993 753 aa8.44□□□□□ -1.06
TRIM39-206ENST00000420746 TP53P04637 393 aaPredicted RBP8.44□□□□□ -1.06
TRIM39-206ENST00000420746 PAX1P15863 534 aa8.44□□□□□ -1.06
TRIM39-206ENST00000420746 TCF4P15884 667 aa8.44□□□□□ -1.06
TRIM39-206ENST00000420746 TPP2P29144 1249 aaPredicted RBP8.44□□□□□ -1.06
TRIM39-206ENST00000420746 RFC3P40938 356 aa8.44□□□□□ -1.06
TRIM39-206ENST00000420746 ST13P50502 369 aaKnown RBP8.44□□□□□ -1.06
TRIM39-206ENST00000420746 ITGA8P53708 1063 aa8.44□□□□□ -1.06
TRIM39-206ENST00000420746 POLR2FP61218 127 aaKnown RBP8.44□□□□□ -1.06
TRIM39-206ENST00000420746 PLOD1Q02809 727 aaPredicted RBP8.44□□□□□ -1.06
TRIM39-206ENST00000420746 SLC25A11Q02978 314 aaKnown RBP8.44□□□□□ -1.06
TRIM39-206ENST00000420746 KRT81Q14533 505 aa8.44□□□□□ -1.06
TRIM39-206ENST00000420746 NAA25Q14CX7 972 aa8.44□□□□□ -1.06
TRIM39-206ENST00000420746 HYAL4Q2M3T9 481 aa8.44□□□□□ -1.06
TRIM39-206ENST00000420746 LANCL3Q6ZV70 420 aa8.44□□□□□ -1.06
TRIM39-206ENST00000420746 ARMC10Q8N2F6 343 aa8.44□□□□□ -1.06
TRIM39-206ENST00000420746 CCNYQ8ND76 341 aa8.44□□□□□ -1.06
TRIM39-206ENST00000420746 OR5M9Q8NGP3 310 aa8.44□□□□□ -1.06
TRIM39-206ENST00000420746 PPP1R14CQ8TAE6 165 aa8.44□□□□□ -1.06
TRIM39-206ENST00000420746 ZNF830Q96NB3 372 aaPredicted RBP8.44□□□□□ -1.06
TRIM39-206ENST00000420746 CCL19Q99731 98 aa8.44□□□□□ -1.06
TRIM39-206ENST00000420746 ZNF670Q9BS34 389 aa8.44□□□□□ -1.06
TRIM39-206ENST00000420746 FICDQ9BVA6 458 aa8.44□□□□□ -1.06
TRIM39-206ENST00000420746 CDCP1Q9H5V8 836 aa8.44□□□□□ -1.06
TRIM39-206ENST00000420746 ZNF629Q9UEG4 869 aaPredicted RBP8.44□□□□□ -1.06
TRIM39-206ENST00000420746 TDRKHQ9Y2W6 561 aaKnown RBP8.44□□□□□ -1.06
TRIM39-206ENST00000420746 PCDHGB3Q9Y5G1 929 aa8.44□□□□□ -1.06
TRIM39-206ENST00000420746 SCINQ9Y6U3 715 aa8.44□□□□□ -1.06
TRIM39-206ENST00000420746 SNRNP200O75643 2136 aaKnown RBP8.44□□□□□ -1.06
TRIM39-206ENST00000420746 DNAJC13O75165 2243 aa8.44□□□□□ -1.06
TRIM39-206ENST00000420746 SCN2AQ99250 2005 aa8.43□□□□□ -1.06
TRIM39-206ENST00000420746 LOC105369274A0A096LPK9 316 aa8.43□□□□□ -1.06
TRIM39-206ENST00000420746 A0A0G2JK05 382 aa8.43□□□□□ -1.06
TRIM39-206ENST00000420746 LOC102723532A0A0G2JNH3 316 aa8.43□□□□□ -1.06
TRIM39-206ENST00000420746 FFAR3O14843 346 aa8.43□□□□□ -1.06
TRIM39-206ENST00000420746 STX7O15400 261 aaKnown RBP8.43□□□□□ -1.06
TRIM39-206ENST00000420746 GPR42O15529 346 aa8.43□□□□□ -1.06
TRIM39-206ENST00000420746 PHF2O75151 1096 aa8.43□□□□□ -1.06
TRIM39-206ENST00000420746 CD9P21926 228 aa8.43□□□□□ -1.06
TRIM39-206ENST00000420746 BMP5P22003 454 aa8.43□□□□□ -1.06
TRIM39-206ENST00000420746 TNNT3P45378 269 aaPredicted RBP8.43□□□□□ -1.06
TRIM39-206ENST00000420746 GBE1Q04446 702 aa8.43□□□□□ -1.06
TRIM39-206ENST00000420746 MMRN1Q13201 1228 aa8.43□□□□□ -1.06
TRIM39-206ENST00000420746 PTK6Q13882 451 aa8.43□□□□□ -1.06
TRIM39-206ENST00000420746 CAPRIN1Q14444 709 aaKnown RBP8.43□□□□□ -1.06
TRIM39-206ENST00000420746 SF1Q15637 639 aaKnown RBP8.43□□□□□ -1.06
TRIM39-206ENST00000420746 C20orf204Q6ZNR8 217 aa8.43□□□□□ -1.06
TRIM39-206ENST00000420746 MAATS1Q7Z4T9 603 aa8.43□□□□□ -1.06
TRIM39-206ENST00000420746 ANKRD37Q7Z713 158 aa8.43□□□□□ -1.06
TRIM39-206ENST00000420746 PCGF5Q86SE9 256 aa8.43□□□□□ -1.06
TRIM39-206ENST00000420746 OR4N4Q8N0Y3 316 aa8.43□□□□□ -1.06
TRIM39-206ENST00000420746 ARHGEF39Q8N4T4 335 aa8.43□□□□□ -1.06
TRIM39-206ENST00000420746 MEIOBQ8N635 442 aa8.43□□□□□ -1.06
TRIM39-206ENST00000420746 LMNTD1Q8N9Z9 388 aa8.43□□□□□ -1.06
TRIM39-206ENST00000420746 OR2L8Q8NGY9 312 aa8.43□□□□□ -1.06
TRIM39-206ENST00000420746 SPATA22Q8NHS9 363 aa8.43□□□□□ -1.06
TRIM39-206ENST00000420746 LINC01560Q8TB33 94 aa8.43□□□□□ -1.06
TRIM39-206ENST00000420746 ELP5Q8TE02 316 aa8.43□□□□□ -1.06
TRIM39-206ENST00000420746 MMABQ96EY8 250 aaPredicted RBP8.43□□□□□ -1.06
TRIM39-206ENST00000420746 LPAR4Q99677 370 aa8.43□□□□□ -1.06
TRIM39-206ENST00000420746 C19orf43Q9BQ61 176 aa8.43□□□□□ -1.06
TRIM39-206ENST00000420746 DRC3Q9H069 523 aa8.43□□□□□ -1.06
TRIM39-206ENST00000420746 DEFB127Q9H1M4 99 aa8.43□□□□□ -1.06
TRIM39-206ENST00000420746 CRLS1Q9UJA2 301 aa8.43□□□□□ -1.06
TRIM39-206ENST00000420746 CDC42EP3Q9UKI2 254 aa8.43□□□□□ -1.06
TRIM39-206ENST00000420746 PLAGL1Q9UM63 463 aa8.43□□□□□ -1.06
TRIM39-206ENST00000420746 ZNF281Q9Y2X9 895 aa8.43□□□□□ -1.06
TRIM39-206ENST00000420746 NPFFR2Q9Y5X5 522 aa8.43□□□□□ -1.06
TRIM39-206ENST00000420746 A0A0J9YVX5 310 aa8.42□□□□□ -1.06
TRIM39-206ENST00000420746 GOLGA6L4A6NEF3 574 aa8.42□□□□□ -1.06
TRIM39-206ENST00000420746 SOWAHDA6NJG2 315 aa8.42□□□□□ -1.06
TRIM39-206ENST00000420746 QSOX1O00391 747 aa8.42□□□□□ -1.06
TRIM39-206ENST00000420746 FCHO1O14526 889 aa8.42□□□□□ -1.06
TRIM39-206ENST00000420746 FOXS1O43638 330 aa8.42□□□□□ -1.06
TRIM39-206ENST00000420746 SUSD5O60279 629 aa8.42□□□□□ -1.06
TRIM39-206ENST00000420746 TMCC2O75069 709 aa8.42□□□□□ -1.06
TRIM39-206ENST00000420746 AP2A2O94973 939 aa8.42□□□□□ -1.06
TRIM39-206ENST00000420746 STATHP02808 62 aa8.42□□□□□ -1.06
TRIM39-206ENST00000420746 EIF2S1P05198 315 aaKnown RBP8.42□□□□□ -1.06
TRIM39-206ENST00000420746 CD48P09326 243 aa8.42□□□□□ -1.06
TRIM39-206ENST00000420746 PRKCIP41743 596 aa8.42□□□□□ -1.06
TRIM39-206ENST00000420746 PTH2RP49190 550 aa8.42□□□□□ -1.06
TRIM39-206ENST00000420746 MLF1P58340 268 aa8.42□□□□□ -1.06
TRIM39-206ENST00000420746 SLC26A5P58743 744 aa8.42□□□□□ -1.06
TRIM39-206ENST00000420746 FAM53BQ14153 422 aa8.42□□□□□ -1.06
TRIM39-206ENST00000420746 DPYSL3Q14195 570 aa8.42□□□□□ -1.06
TRIM39-206ENST00000420746 PIGHQ14442 188 aaPredicted RBP8.42□□□□□ -1.06
TRIM39-206ENST00000420746 USP10Q14694 798 aaKnown RBP8.42□□□□□ -1.06
TRIM39-206ENST00000420746 POU4F3Q15319 338 aa8.42□□□□□ -1.06
TRIM39-206ENST00000420746 ACKR1Q16570 336 aa8.42□□□□□ -1.06
TRIM39-206ENST00000420746 DNAJC21Q5F1R6 531 aaKnown RBP8.42□□□□□ -1.06
TRIM39-206ENST00000420746 SIRPB2Q5JXA9 342 aa8.42□□□□□ -1.06
TRIM39-206ENST00000420746 WLSQ5T9L3 541 aa8.42□□□□□ -1.06
TRIM39-206ENST00000420746 PAPD4Q6PIY7 484 aaKnown RBP8.42□□□□□ -1.06
TRIM39-206ENST00000420746 SLC22A16Q86VW1 577 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms