RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 TMEM132DQ14C87 1099 aa3.73□□□□□ -1.81
HMGB1P49-201ENST00000418882 EFTUD2Q15029 972 aaKnown RBP eCLIP3.73□□□□□ -1.81
HMGB1P49-201ENST00000418882 LBHQ53QV2 105 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P49-201ENST00000418882 CST9LP1Q5W188 147 aa3.73□□□□□ -1.81
HMGB1P49-201ENST00000418882 FAAP20Q6NZ36 180 aa3.73□□□□□ -1.81
HMGB1P49-201ENST00000418882 KRT74Q7RTS7 529 aa3.73□□□□□ -1.81
HMGB1P49-201ENST00000418882 FAM219AQ8IW50 185 aa3.73□□□□□ -1.81
HMGB1P49-201ENST00000418882 NDUFAF2Q8N183 169 aa3.73□□□□□ -1.81
HMGB1P49-201ENST00000418882 TTC30BQ8N4P2 665 aa3.73□□□□□ -1.81
HMGB1P49-201ENST00000418882 LRTM2Q8N967 370 aa3.73□□□□□ -1.81
HMGB1P49-201ENST00000418882 AQP11Q8NBQ7 271 aa3.73□□□□□ -1.81
HMGB1P49-201ENST00000418882 Q8NFD4 153 aa3.73□□□□□ -1.81
HMGB1P49-201ENST00000418882 OR6S1Q8NH40 331 aa3.73□□□□□ -1.81
HMGB1P49-201ENST00000418882 VPS33AQ96AX1 596 aa3.73□□□□□ -1.81
HMGB1P49-201ENST00000418882 KLHL5Q96PQ7 755 aa3.73□□□□□ -1.81
HMGB1P49-201ENST00000418882 SERINC2Q96SA4 455 aa3.73□□□□□ -1.81
HMGB1P49-201ENST00000418882 NAA11Q9BSU3 229 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P49-201ENST00000418882 UPF3AQ9H1J1 476 aaKnown RBP3.73□□□□□ -1.81
HMGB1P49-201ENST00000418882 GSN-AS1Q9NRJ2 163 aa3.73□□□□□ -1.81
HMGB1P49-201ENST00000418882 CLIC5Q9NZA1 410 aa3.73□□□□□ -1.81
HMGB1P49-201ENST00000418882 C19orf25Q9UFG5 118 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P49-201ENST00000418882 SWAP70Q9UH65 585 aa3.73□□□□□ -1.81
HMGB1P49-201ENST00000418882 MAN1B1Q9UKM7 699 aa3.73□□□□□ -1.81
HMGB1P49-201ENST00000418882 MMP24Q9Y5R2 645 aa3.73□□□□□ -1.81
HMGB1P49-201ENST00000418882 TRBV4-1A0A0J9YWV2 114 aa3.72□□□□□ -1.81
HMGB1P49-201ENST00000418882 SNX3O60493 162 aa3.72□□□□□ -1.81
HMGB1P49-201ENST00000418882 IGHEP01854 428 aa3.72□□□□□ -1.81
HMGB1P49-201ENST00000418882 SERPING1P05155 500 aa3.72□□□□□ -1.81
HMGB1P49-201ENST00000418882 RPL35AP18077 110 aaKnown RBP3.72□□□□□ -1.81
HMGB1P49-201ENST00000418882 UGT1A4P22310 534 aa3.72□□□□□ -1.81
HMGB1P49-201ENST00000418882 PRKACGP22612 351 aa3.72□□□□□ -1.81
HMGB1P49-201ENST00000418882 DSCR10P59022 87 aa3.72□□□□□ -1.81
HMGB1P49-201ENST00000418882 PTGISQ16647 500 aa3.72□□□□□ -1.81
HMGB1P49-201ENST00000418882 C2CD6Q53TS8 623 aa3.72□□□□□ -1.81
HMGB1P49-201ENST00000418882 LRRTM1Q86UE6 522 aa3.72□□□□□ -1.81
HMGB1P49-201ENST00000418882 CAMKVQ8NCB2 501 aa3.72□□□□□ -1.81
HMGB1P49-201ENST00000418882 CCDC191Q8NCU4 936 aa3.72□□□□□ -1.81
HMGB1P49-201ENST00000418882 MAPK15Q8TD08 544 aa3.72□□□□□ -1.81
HMGB1P49-201ENST00000418882 EXT2Q93063 718 aa3.72□□□□□ -1.81
HMGB1P49-201ENST00000418882 RMDN1Q96DB5 314 aa3.72□□□□□ -1.81
HMGB1P49-201ENST00000418882 AGAP3Q96P47 875 aa3.72□□□□□ -1.81
HMGB1P49-201ENST00000418882 NDNQ99608 321 aa3.72□□□□□ -1.81
HMGB1P49-201ENST00000418882 WWTR1Q9GZV5 400 aa3.72□□□□□ -1.81
HMGB1P49-201ENST00000418882 THEGQ9P2T0 379 aa3.72□□□□□ -1.81
HMGB1P49-201ENST00000418882 LIPGQ9Y5X9 500 aa3.72□□□□□ -1.81
HMGB1P49-201ENST00000418882 CSNK1G3Q9Y6M4 447 aa3.72□□□□□ -1.81
HMGB1P49-201ENST00000418882 G3V2L1 256 aa3.71□□□□□ -1.82
HMGB1P49-201ENST00000418882 PLOD3O60568 738 aa3.71□□□□□ -1.82
HMGB1P49-201ENST00000418882 DUTP33316 252 aaKnown RBP3.71□□□□□ -1.82
HMGB1P49-201ENST00000418882 OR3A2P47893 321 aa3.71□□□□□ -1.82
HMGB1P49-201ENST00000418882 DLK1P80370 383 aa3.71□□□□□ -1.82
HMGB1P49-201ENST00000418882 NUCB1Q02818 461 aa3.71□□□□□ -1.82
HMGB1P49-201ENST00000418882 CDH18Q13634 790 aa3.71□□□□□ -1.82
HMGB1P49-201ENST00000418882 COG2Q14746 738 aa3.71□□□□□ -1.82
HMGB1P49-201ENST00000418882 GLIPR1L2Q4G1C9 344 aa3.71□□□□□ -1.82
HMGB1P49-201ENST00000418882 WLSQ5T9L3 541 aa3.71□□□□□ -1.82
HMGB1P49-201ENST00000418882 ZNF343Q6P1L6 599 aa3.71□□□□□ -1.82
HMGB1P49-201ENST00000418882 PPP1R21Q6ZMI0 780 aa3.71□□□□□ -1.82
HMGB1P49-201ENST00000418882 ANKRD33Q7Z3H0 272 aa3.71□□□□□ -1.82
HMGB1P49-201ENST00000418882 NME8Q8N427 588 aa3.71□□□□□ -1.82
HMGB1P49-201ENST00000418882 Q8NBF4 154 aa3.71□□□□□ -1.82
HMGB1P49-201ENST00000418882 PRICKLE1Q96MT3 831 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P49-201ENST00000418882 NKX3-1Q99801 234 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P49-201ENST00000418882 KATNB1Q9BVA0 655 aa3.71□□□□□ -1.82
HMGB1P49-201ENST00000418882 EGLN3Q9H6Z9 239 aa3.71□□□□□ -1.82
HMGB1P49-201ENST00000418882 PHPT1Q9NRX4 125 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P49-201ENST00000418882 TERF2IPQ9NYB0 399 aa3.71□□□□□ -1.82
HMGB1P49-201ENST00000418882 NUDT4Q9NZJ9 180 aa3.71□□□□□ -1.82
HMGB1P49-201ENST00000418882 TXNDC16Q9P2K2 825 aa3.71□□□□□ -1.82
HMGB1P49-201ENST00000418882 CCL27Q9Y4X3 112 aa3.71□□□□□ -1.82
HMGB1P49-201ENST00000418882 A0A1B0GVY2 172 aa3.7□□□□□ -1.82
HMGB1P49-201ENST00000418882 ECE2O60344 883 aa3.7□□□□□ -1.82
HMGB1P49-201ENST00000418882 RPS6KA5O75582 802 aa3.7□□□□□ -1.82
HMGB1P49-201ENST00000418882 CENPBP07199 599 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P49-201ENST00000418882 GATA2P23769 480 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P49-201ENST00000418882 RBMS1P29558 406 aaKnown RBP3.7□□□□□ -1.82
HMGB1P49-201ENST00000418882 RAD23AP54725 363 aa3.7□□□□□ -1.82
HMGB1P49-201ENST00000418882 MYL7Q01449 175 aa3.7□□□□□ -1.82
HMGB1P49-201ENST00000418882 TRIM29Q14134 588 aa3.7□□□□□ -1.82
HMGB1P49-201ENST00000418882 LY6DQ14210 128 aa3.7□□□□□ -1.82
HMGB1P49-201ENST00000418882 PTPN14Q15678 1187 aa3.7□□□□□ -1.82
HMGB1P49-201ENST00000418882 HYAL4Q2M3T9 481 aa3.7□□□□□ -1.82
HMGB1P49-201ENST00000418882 KRT71Q3SY84 523 aa3.7□□□□□ -1.82
HMGB1P49-201ENST00000418882 CES4AQ5XG92 561 aa3.7□□□□□ -1.82
HMGB1P49-201ENST00000418882 LYSMD4Q5XG99 296 aa3.7□□□□□ -1.82
HMGB1P49-201ENST00000418882 KRT80Q6KB66 452 aa3.7□□□□□ -1.82
HMGB1P49-201ENST00000418882 PAQR6Q6TCH4 344 aa3.7□□□□□ -1.82
HMGB1P49-201ENST00000418882 KIF6Q6ZMV9 814 aa3.7□□□□□ -1.82
HMGB1P49-201ENST00000418882 APCDD1Q8J025 514 aa3.7□□□□□ -1.82
HMGB1P49-201ENST00000418882 NOA1Q8NC60 698 aaKnown RBP3.7□□□□□ -1.82
HMGB1P49-201ENST00000418882 GTF3AQ92664 365 aaKnown RBP3.7□□□□□ -1.82
HMGB1P49-201ENST00000418882 CNRIP1Q96F85 164 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P49-201ENST00000418882 FER1L6-AS2Q96M78 137 aa3.7□□□□□ -1.82
HMGB1P49-201ENST00000418882 MTMR12Q9C0I1 747 aa3.7□□□□□ -1.82
HMGB1P49-201ENST00000418882 RAVER2Q9HCJ3 691 aaKnown RBP3.7□□□□□ -1.82
HMGB1P49-201ENST00000418882 CCDC177Q9NQR7 707 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P49-201ENST00000418882 NFKBIL1Q9UBC1 381 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P49-201ENST00000418882 POLLQ9UGP5 575 aa3.7□□□□□ -1.82
HMGB1P49-201ENST00000418882 TTLL3Q9Y4R7 772 aa3.7□□□□□ -1.82
HMGB1P49-201ENST00000418882 NPIPB9F8W1W9 429 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms