RNA–Protein interactions for RNA: ENST00000418375.1

TMEM248-203, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-203ENST00000418375 SULT1C3Q6IMI6 304 aa12.79□□□□□ -0.36
TMEM248-203ENST00000418375 TLDC1Q6P9B6 456 aa12.79□□□□□ -0.36
TMEM248-203ENST00000418375 TIFABQ6ZNK6 161 aa12.79□□□□□ -0.36
TMEM248-203ENST00000418375 ISCA2Q86U28 154 aa12.79□□□□□ -0.36
TMEM248-203ENST00000418375 PAQR7Q86WK9 346 aa12.79□□□□□ -0.36
TMEM248-203ENST00000418375 CENPLQ8N0S6 344 aaPredicted RBP12.79□□□□□ -0.36
TMEM248-203ENST00000418375 AENQ8WTP8 325 aaKnown RBP12.79□□□□□ -0.36
TMEM248-203ENST00000418375 CAVIN3Q969G5 261 aa12.79□□□□□ -0.36
TMEM248-203ENST00000418375 NKD1Q969G9 470 aa12.79□□□□□ -0.36
TMEM248-203ENST00000418375 PYCR2Q96C36 320 aa12.79□□□□□ -0.36
TMEM248-203ENST00000418375 RHBDF1Q96CC6 855 aa12.79□□□□□ -0.36
TMEM248-203ENST00000418375 CABS1Q96KC9 395 aa12.79□□□□□ -0.36
TMEM248-203ENST00000418375 ZFYVE21Q9BQ24 234 aa12.79□□□□□ -0.36
TMEM248-203ENST00000418375 SELENOSQ9BQE4 189 aa12.79□□□□□ -0.36
TMEM248-203ENST00000418375 ARHGAP9Q9BRR9 750 aa12.79□□□□□ -0.36
TMEM248-203ENST00000418375 CNOT10Q9H9A5 744 aaKnown RBP12.79□□□□□ -0.36
TMEM248-203ENST00000418375 ACTR5Q9H9F9 607 aaPredicted RBP12.79□□□□□ -0.36
TMEM248-203ENST00000418375 TMEM184CQ9NVA4 438 aa12.79□□□□□ -0.36
TMEM248-203ENST00000418375 WWOXQ9NZC7 414 aa12.79□□□□□ -0.36
TMEM248-203ENST00000418375 CD274Q9NZQ7 290 aa12.79□□□□□ -0.36
TMEM248-203ENST00000418375 DYRK1BQ9Y463 629 aa12.79□□□□□ -0.36
TMEM248-203ENST00000418375 IGKV1-8A0A0C4DH67 115 aa12.78□□□□□ -0.36
TMEM248-203ENST00000418375 A0A0J9YVX5 310 aa12.78□□□□□ -0.36
TMEM248-203ENST00000418375 SUPT3HB4E1H0 165 aa12.78□□□□□ -0.36
TMEM248-203ENST00000418375 H7BY64 318 aa12.78□□□□□ -0.36
TMEM248-203ENST00000418375 J3QKU1 62 aa12.78□□□□□ -0.36
TMEM248-203ENST00000418375 ZSCAN9O15535 394 aaPredicted RBP12.78□□□□□ -0.36
TMEM248-203ENST00000418375 ZNF749O43361 778 aa12.78□□□□□ -0.36
TMEM248-203ENST00000418375 CTSVO60911 334 aa12.78□□□□□ -0.36
TMEM248-203ENST00000418375 SUPT3HO75486 399 aa12.78□□□□□ -0.36
TMEM248-203ENST00000418375 IPO13O94829 963 aaKnown RBP12.78□□□□□ -0.36
TMEM248-203ENST00000418375 NTRK1P04629 796 aa12.78□□□□□ -0.36
TMEM248-203ENST00000418375 KLK3P07288 261 aaPredicted RBP12.78□□□□□ -0.36
TMEM248-203ENST00000418375 COL6A2P12110 1019 aa12.78□□□□□ -0.36
TMEM248-203ENST00000418375 EZRP15311 586 aaKnown RBP12.78□□□□□ -0.36
TMEM248-203ENST00000418375 NPPBP16860 134 aa12.78□□□□□ -0.36
TMEM248-203ENST00000418375 YBX1P67809 324 aaKnown RBP12.78□□□□□ -0.36
TMEM248-203ENST00000418375 ABHD18Q0P651 414 aa12.78□□□□□ -0.36
TMEM248-203ENST00000418375 TSNAXIP1Q2TAA8 658 aa12.78□□□□□ -0.36
TMEM248-203ENST00000418375 PTCHD3Q3KNS1 767 aa12.78□□□□□ -0.36
TMEM248-203ENST00000418375 LINC00303Q3SY05 128 aa12.78□□□□□ -0.36
TMEM248-203ENST00000418375 ZNF425Q6IV72 752 aa12.78□□□□□ -0.36
TMEM248-203ENST00000418375 RNF44Q7L0R7 432 aa12.78□□□□□ -0.36
TMEM248-203ENST00000418375 TIPARPQ7Z3E1 657 aaKnown RBP12.78□□□□□ -0.36
TMEM248-203ENST00000418375 THOC6Q86W42 341 aaKnown RBP12.78□□□□□ -0.36
TMEM248-203ENST00000418375 EXD3Q8N9H8 876 aa12.78□□□□□ -0.36
TMEM248-203ENST00000418375 GALNT6Q8NCL4 622 aa12.78□□□□□ -0.36
TMEM248-203ENST00000418375 PDPRQ8NCN5 879 aa12.78□□□□□ -0.36
TMEM248-203ENST00000418375 RHEBL1Q8TAI7 183 aa12.78□□□□□ -0.36
TMEM248-203ENST00000418375 EXTL1Q92935 676 aa12.78□□□□□ -0.36
TMEM248-203ENST00000418375 EXT2Q93063 718 aa12.78□□□□□ -0.36
TMEM248-203ENST00000418375 KIAA1143Q96AT1 154 aaPredicted RBP12.78□□□□□ -0.36
TMEM248-203ENST00000418375 CLIP3Q96DZ5 547 aa12.78□□□□□ -0.36
TMEM248-203ENST00000418375 RNF31Q96EP0 1072 aa12.78□□□□□ -0.36
TMEM248-203ENST00000418375 LRFN5Q96NI6 719 aa12.78□□□□□ -0.36
TMEM248-203ENST00000418375 PRAP1Q96NZ9 151 aa12.78□□□□□ -0.36
TMEM248-203ENST00000418375 NDC1Q9BTX1 674 aa12.78□□□□□ -0.36
TMEM248-203ENST00000418375 SPRTNQ9H040 489 aaPredicted RBP12.78□□□□□ -0.36
TMEM248-203ENST00000418375 CUEDC1Q9NWM3 386 aaPredicted RBP12.78□□□□□ -0.36
TMEM248-203ENST00000418375 NUDT4Q9NZJ9 180 aa12.78□□□□□ -0.36
TMEM248-203ENST00000418375 RAB21Q9UL25 225 aa12.78□□□□□ -0.36
TMEM248-203ENST00000418375 PADI1Q9ULC6 663 aa12.78□□□□□ -0.36
TMEM248-203ENST00000418375 SRPK3Q9UPE1 567 aa12.78□□□□□ -0.36
TMEM248-203ENST00000418375 KCNE2Q9Y6J6 123 aa12.78□□□□□ -0.36
TMEM248-203ENST00000418375 HCRTR1O43613 425 aa12.77□□□□□ -0.37
TMEM248-203ENST00000418375 WDR47O94967 919 aa12.77□□□□□ -0.37
TMEM248-203ENST00000418375 ZIC2O95409 532 aaPredicted RBP12.77□□□□□ -0.37
TMEM248-203ENST00000418375 SHBGP04278 402 aa12.77□□□□□ -0.37
TMEM248-203ENST00000418375 RBP1P09455 135 aa12.77□□□□□ -0.37
TMEM248-203ENST00000418375 CDH1P12830 882 aa12.77□□□□□ -0.37
TMEM248-203ENST00000418375 WT1P19544 449 aaPredicted RBP12.77□□□□□ -0.37
TMEM248-203ENST00000418375 GRK3P35626 688 aa12.77□□□□□ -0.37
TMEM248-203ENST00000418375 GLRBP48167 497 aa12.77□□□□□ -0.37
TMEM248-203ENST00000418375 CCR8P51685 355 aa12.77□□□□□ -0.37
TMEM248-203ENST00000418375 ARSFP54793 590 aa12.77□□□□□ -0.37
TMEM248-203ENST00000418375 VSX2P58304 361 aaPredicted RBP12.77□□□□□ -0.37
TMEM248-203ENST00000418375 GRM7Q14831 915 aa12.77□□□□□ -0.37
TMEM248-203ENST00000418375 ZXDCQ2QGD7 858 aaPredicted RBP12.77□□□□□ -0.37
TMEM248-203ENST00000418375 PRAMEF17Q5VTA0 474 aa12.77□□□□□ -0.37
TMEM248-203ENST00000418375 YOD1Q5VVQ6 348 aaPredicted RBP12.77□□□□□ -0.37
TMEM248-203ENST00000418375 FBXO42Q6P3S6 717 aa12.77□□□□□ -0.37
TMEM248-203ENST00000418375 TDRPQ86YL5 185 aa12.77□□□□□ -0.37
TMEM248-203ENST00000418375 KLHDC8AQ8IYD2 350 aa12.77□□□□□ -0.37
TMEM248-203ENST00000418375 ZNF655Q8N720 491 aaPredicted RBP12.77□□□□□ -0.37
TMEM248-203ENST00000418375 TTC29Q8NA56 475 aaPredicted RBP12.77□□□□□ -0.37
TMEM248-203ENST00000418375 ACMSDQ8TDX5 336 aa12.77□□□□□ -0.37
TMEM248-203ENST00000418375 SLC5A11Q8WWX8 675 aa12.77□□□□□ -0.37
TMEM248-203ENST00000418375 RERGQ96A58 199 aaPredicted RBP12.77□□□□□ -0.37
TMEM248-203ENST00000418375 SCYL1Q96KG9 808 aa12.77□□□□□ -0.37
TMEM248-203ENST00000418375 OR4K3Q96R72 315 aa12.77□□□□□ -0.37
TMEM248-203ENST00000418375 ATOH8Q96SQ7 321 aa12.77□□□□□ -0.37
TMEM248-203ENST00000418375 EFHD1Q9BUP0 239 aa12.77□□□□□ -0.37
TMEM248-203ENST00000418375 TXLNGQ9NUQ3 528 aa12.77□□□□□ -0.37
TMEM248-203ENST00000418375 TBK1Q9UHD2 729 aa12.77□□□□□ -0.37
TMEM248-203ENST00000418375 SLC22A14Q9Y267 594 aa12.77□□□□□ -0.37
TMEM248-203ENST00000418375 H3BMH7 237 aa12.76□□□□□ -0.37
TMEM248-203ENST00000418375 UBXN8O00124 270 aa12.76□□□□□ -0.37
TMEM248-203ENST00000418375 MEN1O00255 615 aa12.76□□□□□ -0.37
TMEM248-203ENST00000418375 HAT1O14929 419 aa12.76□□□□□ -0.37
TMEM248-203ENST00000418375 NRP2O60462 931 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms